HHsearch alignment for GI: 254780841 and conserved domain: KOG1617

Probab=98.98  E-value=1.3e-09  Score=73.62  Aligned_cols=113  Identities=24%  Similarity=0.270  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999998498899999999999983123899998287436753263667557999999999999
Q gi|254780841|r   17 AFSVHILTAFGSFIAFLGVTAAAQYRIVDMFWWLGLALIIDGFDGPIARKMRVKEVLPNWSGDTLDNIIDYLTYVVLPAF   96 (246)
Q Consensus        17 ~~~p~l~T~~~l~~G~~ai~~a~~g~~~~A~~~i~iA~i~D~lDG~iAR~~~~~s~fp~~~G~~LDSLaD~vsFGvaPa~   96 (246)
T Consensus        68 ~tiPN~Ltl~Ri~a~Pli~~lii~~~~t~A~~~Fa~Ag~TD~lDGyIARk~~l~S~~----Gs~LDPlADkvlit~~~l~  143 (243)
T KOG1617          68 LTIPNMLTLARIAATPLIGYLIIDENFTAAFGLFAVAGITDLLDGYIARKMRLGSIA----GSVLDPLADKVLITCLTLC  143 (243)
T ss_pred             CCCCHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH----HHCCCHHHHHHHHHHHHHH
T ss_conf             126327888787430604677751334099999999876887778888631334034----4302748888999999999


Q ss_pred             HHHHHHCCCCCHHHHHHHHHHH-HHHHHHHHHHCCCCCC
Q ss_conf             9999720346835899999999-9999999850355789
Q gi|254780841|r   97 ALYQSNLLGNSTGSSVAAGMMV-ISSSIYYAYTNMKTEE  134 (246)
Q Consensus        97 l~y~~~~~~~~~~~~~~~~~~~-~~~alRLArfN~~~~~  134 (246)
T Consensus       144 m~~-~~liPvpL~~~IIgRDV~Lv~~~~y~ry~~l~~p~  181 (243)
T KOG1617         144 MVY-ADLIPVPLASIIIGRDVLLVAGAFYLRYQNLKLPY  181 (243)
T ss_pred             HHH-HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf             876-30257403455555678999999999986278750