HHsearch alignment for GI: 254780841 and conserved domain: KOG3240

Probab=98.58  E-value=1.1e-07  Score=62.75  Aligned_cols=87  Identities=21%  Similarity=0.216  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf             11007779999999999999999999999998498899999999999983123899998287436753263667557999
Q gi|254780841|r    8 KNFSHKRVSAFSVHILTAFGSFIAFLGVTAAAQYRIVDMFWWLGLALIIDGFDGPIARKMRVKEVLPNWSGDTLDNIIDY   87 (246)
Q Consensus         8 ~~~~~~~~~~~~p~l~T~~~l~~G~~ai~~a~~g~~~~A~~~i~iA~i~D~lDG~iAR~~~~~s~fp~~~G~~LDSLaD~   87 (246)
T Consensus         4 ~~~~~~~v~~~iPN~iGY~RI~laiisf~vm-~~~p~~~~~lY~~S~lLDAfDG~aAR~~NQ~S~f----GA~LDmvTDR   78 (218)
T KOG3240           4 KKPMKESVFLYIPNLIGYMRIVLAILSFYVM-SSNPTTFSVLYLLSSLLDAFDGWAARKLNQVSRF----GAMLDMVTDR   78 (218)
T ss_pred             CCCCCCCEEEEECCHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
T ss_conf             7778876489844056499999999999995-2693389999999877876527999987204258----8999999877


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780841|r   88 LTYVVLPAFALY   99 (246)
Q Consensus        88 vsFGvaPa~l~y   99 (246)
T Consensus        79 ~st~~LL~~L~~   90 (218)
T KOG3240          79 CSTACLLVFLCQ   90 (218)
T ss_pred             HHHHHHHHHHHH
T ss_conf             626999999999