HHsearch alignment for GI: 254780841 and conserved domain: TIGR00560
>TIGR00560 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; InterPro: IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (2.7.8.5 from EC), also known as phosphatidylglycerophosphate synthase, glycerophosphate phosphatidyltransferase and PGP synthase, catalyses the conversion ofCDP-diacylglycerol and glycerol-3-phosphate to CMP and 3-(3-phosphatidyl)-glycerol 1-phosphate in the commited step to the synthesis of acidic phospholipids. It is an integral membrane protein. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharomyces cerevisiae (Baker's yeast) YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.; GO: 0008444 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity, 0008654 phospholipid biosynthetic process, 0016021 integral to membrane.
Probab=98.84 E-value=4.9e-08 Score=64.70 Aligned_cols=134 Identities=19% Similarity=0.109 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHC--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
Q ss_conf 9999999999999999999984--------------------98899999999999983123899998287436753263
Q gi|254780841|r 19 SVHILTAFGSFIAFLGVTAAAQ--------------------YRIVDMFWWLGLALIIDGFDGPIARKMRVKEVLPNWSG 78 (246)
Q Consensus 19 ~p~l~T~~~l~~G~~ai~~a~~--------------------g~~~~A~~~i~iA~i~D~lDG~iAR~~~~~s~fp~~~G 78 (246)
T Consensus 3 ~Pn~lT~~Ri~~~~p~~~l~~l~~~~~~~~~~~vG~~~~~~~~~~~~~~~lF~~A~~TDwlDGYlARk~~~vs~f----G 78 (217)
T TIGR00560 3 IPNWLTLFRIFILLPLFILIFLENLLGVLAEFGVGAVVLPIQVSLFIGGLLFLIAAVTDWLDGYLARKWNLVSNF----G 78 (217)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH----H
T ss_conf 607999999999999999996320021100222130002387998999999999979877789999996021212----3
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCC-CCCEEEEE-CHHHHHHHHH--H
Q ss_conf 667557999999999-9999999720346835899999999999999985035-578-98432301-0789999999--9
Q gi|254780841|r 79 DTLDNIIDYLTYVVL-PAFALYQSNLLGNSTGSSVAAGMMVISSSIYYAYTNM-KTE-EHFFSGFP-AVWNMVVFSL--I 152 (246)
Q Consensus 79 ~~LDSLaD~vsFGva-Pa~l~y~~~~~~~~~~~~~~~~~~~~~~alRLArfN~-~~~-~~~F~GlP-~pa~a~~~~~--~ 152 (246)
T Consensus 79 k~lDPlADK~lv~~a~~Li~l~~~~~~~~~~~~vii~RE~~i-~glR~~~~~~~~~~~~aN~lGK~KT~~Q~vAi~~SlL 157 (217)
T TIGR00560 79 KFLDPLADKVLVLAALVLIILVYHGYVPAWFVIVIIARELVI-SGLRVLAAEKGKEVIAANWLGKWKTVAQMVAIAASLL 157 (217)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 464028769999999999999998799999999999999999-9999999980882010302007999999999999998
Q ss_pred HHCCC
Q ss_conf 82232
Q gi|254780841|r 153 ALNAS 157 (246)
Q Consensus 153 ~l~~~ 157 (246)
T Consensus 158 l~~~~ 162 (217)
T TIGR00560 158 LWSLN 162 (217)
T ss_pred HCCCC
T ss_conf 31543