HHsearch alignment for GI: 254780842 and conserved domain: COG0445
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning].
Probab=98.30 E-value=1.1e-06 Score=67.98 Aligned_cols=145 Identities=18% Similarity=0.280 Sum_probs=81.9
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC-C-----CC-CCEEEECHH-HHHHHHHCC-CHHHHHHCCCCCC
Q ss_conf 9700299997908999999999978985999828855-5-----57-836888788-999999889-9478886047123
Q gi|254780842|r 1 MNHFDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSF-L-----QD-LRTTMLMGE-GIDFLKEIN-VWDFLQDIAEPVS 71 (384)
Q Consensus 1 M~~~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~-~-----~~-~r~~~l~~~-s~~~L~~lG-l~~~l~~~~~~~~ 71 (384)
T Consensus 2 ~~~~DVIVIGgGHAG~EAA~AaARmG~ktlLlT~~~dtig~msCNPaIGG~--~KG~lvrEIDALGG~Mg~~~D~~~-I- 77 (621)
T COG0445 2 PKEYDVIVIGGGHAGVEAALAAARMGAKTLLLTLNLDTIGEMSCNPAIGGP--GKGHLVREIDALGGLMGKAADKAG-I- 77 (621)
T ss_pred CCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCC--CCCEEEEEEHHCCCHHHHHHHHCC-C-
T ss_conf 987856998998420477776643698079997377744650356445773--553267752412455777666507-8-
Q ss_pred CEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE--EEEECCCCCE
Q ss_conf 41899425765545444345022287531201110000000012366479832342056530268717--8983023201
Q gi|254780842|r 72 SFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFDALANEIQIGEEE--VTILLSTGQQ 149 (384)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~~~v~~i~~~~~~--v~v~~~dg~~ 149 (384)
T Consensus 78 Q~r~LN~sKGPAVr-------------a~RaQaDk~~Y~~~mk~~le~~~NL~l~q~~v~dli~e~~~~v~GV~t~~G~~ 144 (621)
T COG0445 78 QFRMLNSSKGPAVR-------------APRAQADKWLYRRAMKNELENQPNLHLLQGEVEDLIVEEGQRVVGVVTADGPE 144 (621)
T ss_pred CHHHCCCCCCCHHC-------------CHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCEEEEEEECCCCE
T ss_conf 65333677762104-------------50654428999999999985499955247666787133797689999278785
Q ss_pred EEEEEEEEECCCC
Q ss_conf 2111235303754
Q gi|254780842|r 150 IVGQFLIGSDGRN 162 (384)
Q Consensus 150 i~adlvVgADG~~ 162 (384)
T Consensus 145 ~~a~aVVlTTGTF 157 (621)
T COG0445 145 FHAKAVVLTTGTF 157 (621)
T ss_pred EECCEEEEEECCC
T ss_conf 1068799963344