HHsearch alignment for GI: 254780842 and conserved domain: COG2072
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].
Probab=98.85 E-value=4e-08 Score=78.56 Aligned_cols=133 Identities=20% Similarity=0.268 Sum_probs=73.1
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHHCCCE-EEEEECCCCCCCCCEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECC
Q ss_conf 9700299997908999999999978985-999828855557836888788999999889947888604712341899425
Q gi|254780842|r 1 MNHFDVIIIGSGLAGSVAAIGAAKKGFL-TALVSPRSFLQDLRTTMLMGEGIDFLKEINVWDFLQDIAEPVSSFRLVDIT 79 (384)
Q Consensus 1 M~~~DV~IvGaG~aGl~lA~~L~~~g~~-v~iiE~~~~~~~~r~~~l~~~s~~~L~~lGl~~~l~~~~~~~~~~~~~~~~ 79 (384)
T Consensus 6 ~~~~~v~IIGaG~sGlaaa~~L~~~g~~~~~i~Ek~~~~Gg------------------~W~~~-----ry~~l~~-~~p 61 (443)
T COG2072 6 ATHTDVAIIGAGQSGLAAAYALKQAGVPDFVIFEKRDDVGG------------------TWRYN-----RYPGLRL-DSP 61 (443)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC------------------CCCCC-----CCCEEEE-CCC
T ss_conf 67554899898788999999999759986799970576678------------------65556-----6871676-797
Q ss_pred CCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCC----CCCEEEEEECCCCEEEEEECCCCCE--EEEE
Q ss_conf 765545444345022287531201110000000012366479832----3420565302687178983023201--2111
Q gi|254780842|r 80 DRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIH----CFDALANEIQIGEEEVTILLSTGQQ--IVGQ 153 (384)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~----~~~~~v~~i~~~~~~v~v~~~dg~~--i~ad 153 (384)
T Consensus 62 ~~~~~~~~~p~~-~~~~~~~------~~~~~~y~~~~~~~y~~~~~i~~~~~v~~~~~~~~~~~w~V~~~~~~~~~~~a~ 134 (443)
T COG2072 62 KWLLGFPFLPFR-WDEAFAP------FAEIKDYIKDYLEKYGLRFQIRFNTRVEVADWDEDTKRWTVTTSDGGTGELTAD 134 (443)
T ss_pred CCCCCCCCCCCC-CCCCCCC------CCCHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCCEEEEEECCCCCCEEECC
T ss_conf 401158888877-6556777------643899999999983560450214525688630588706999648875225126
Q ss_pred EEEEECCCCCC
Q ss_conf 23530375432
Q gi|254780842|r 154 FLIGSDGRNSS 164 (384)
Q Consensus 154 lvVgADG~~S~ 164 (384)
T Consensus 135 ~vV~ATG~~~~ 145 (443)
T COG2072 135 FVVVATGHLSE 145 (443)
T ss_pred EEEECCCCCCC
T ss_conf 79983057898