HHsearch alignment for GI: 254780842 and conserved domain: COG3380

>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only].
Probab=98.78  E-value=2.5e-07  Score=72.68  Aligned_cols=259  Identities=14%  Similarity=0.111  Sum_probs=118.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC-------------CCCEEEECHHHHHHHHHCCCHHHHHHCCCC-C
Q ss_conf             29999790899999999997898599982885555-------------783688878899999988994788860471-2
Q gi|254780842|r    5 DVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQ-------------DLRTTMLMGEGIDFLKEINVWDFLQDIAEP-V   70 (384)
Q Consensus         5 DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~-------------~~r~~~l~~~s~~~L~~lGl~~~l~~~~~~-~   70 (384)
T Consensus         3 siaIVGaGiAGl~aA~~L~~aG~~vtV~eKg~GvGGRlAtRRl~~g~~DhGAqYfk~~~~~F~~~V---e~~~~~glV~~   79 (331)
T COG3380           3 SIAIVGAGIAGLAAAYALREAGREVTVFEKGRGVGGRLATRRLDGGRFDHGAQYFKPRDELFLRAV---EALRDDGLVDV   79 (331)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHEECCCCCCCCCCCEEECCCCHHHHHHH---HHHHHCCCEEE
T ss_conf             479975636889999999866957999973887553110000578653455504157865799999---99986785430


Q ss_pred             CCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCC-E
Q ss_conf             341899425765545444345022287531201110000000012366479832342056530268717898302320-1
Q gi|254780842|r   71 SSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFDALANEIQIGEEEVTILLSTGQ-Q  149 (384)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~~~v~~i~~~~~~v~v~~~dg~-~  149 (384)
T Consensus        80 W~~~~~~~~~~~-~~~~~d----~--~pyvg-~pgmsalak~LAtdL-----~V~~~~rVt~v~~~~~~W~l~~~~g~~~  146 (331)
T COG3380          80 WTPAVWTFTGDG-SPPRGD----E--DPYVG-EPGMSALAKFLATDL-----TVVLETRVTEVARTDNDWTLHTDDGTRH  146 (331)
T ss_pred             CCCCCCCCCCCC-CCCCCC----C--CCCCC-CCCHHHHHHHHHCCC-----HHHHHHHHHHHEECCCEEEEEECCCCCC
T ss_conf             351110113688-899888----7--76236-743679999872450-----4344223143123387168984688764


Q ss_pred             EEEEEEEEEC--------------CCCCCCCCCCCCCCCCCCCCEE-EEEEEEC--CCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf             2111235303--------------7543200037873322224304-7876411--478861178872278754210001
Q gi|254780842|r  150 IVGQFLIGSD--------------GRNSSVRRQMGYGENKWSYPQK-ALVLNFQ--HSMPHNGRCVEFHKSLGTITQIPL  212 (384)
Q Consensus       150 i~adlvVgAD--------------G~~S~vR~~l~~~~~~~~y~~~-~l~~~~~--~~~~~~~~a~~~f~~~G~~a~lP~  212 (384)
T Consensus       147 ~~~d~vvla~PAPQ~~~LLt~~~~~~p~~l~~~~----a~V~y~Pc~s~~lg~~q~l~~P~~G----~~vdg~~laWla~  218 (331)
T COG3380         147 TQFDDVVLAIPAPQTATLLTTDADDLPAALRAAL----ADVVYAPCWSAVLGYPQPLDRPWPG----NFVDGHPLAWLAR  218 (331)
T ss_pred             CCCCEEEEECCCCCCHHHCCCCCCCCHHHHHHHH----CCCEEHHHHHHHHCCCCCCCCCCCC----CCCCCCEEEEEEC
T ss_conf             5534389936887531221755454369999763----2514205899984688667888898----6217870022000


Q ss_pred             C---CCC----EEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCEEEEEECC----CCCC---CHHHHH
Q ss_conf             2---320----112675075673245532234678877630675467621---1102232022----3343---045653
Q gi|254780842|r  213 R---ENF----SSLVWIMESQEADFYYKLPVNEIARRLEQYLYPVIGKIE---VVTDVQIFQL----SGMI---SHCFGK  275 (384)
Q Consensus       213 ~---~~~----~~ivw~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~pl----~~~~---~~~~~~  275 (384)
T Consensus       219 d~sK~g~~p~~~~~vvqasp~wSr~h~~~~~e~~i~~l~aA~~~~~~~~~~~p~~s~~H~WrYA~P~~~~~~~~L~ad~~  298 (331)
T COG3380         219 DASKKGHVPDGEIWVVQASPDWSREHLDHPAEQVIVALRAAAQELDGDRLPEPDWSDAHRWRYAIPNDAVAGPPLDADRE  298 (331)
T ss_pred             CCCCCCCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf             34678878768659997082677976269878899999875200447778860577750431036530104775115778


Q ss_pred             CCCCEECCCCCC
Q ss_conf             794210110011
Q gi|254780842|r  276 KRVVLVGEAAHA  287 (384)
Q Consensus       276 ~rv~liGDAAH~  287 (384)
T Consensus       299 ~~l~~cGDwc~G  310 (331)
T COG3380         299 LPLYACGDWCAG  310 (331)
T ss_pred             CCEEEECCCCCC
T ss_conf             762664033457