HHsearch alignment for GI: 254780842 and conserved domain: COG3380
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only].
Probab=98.78 E-value=2.5e-07 Score=72.68 Aligned_cols=259 Identities=14% Similarity=0.111 Sum_probs=118.3
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC-------------CCCEEEECHHHHHHHHHCCCHHHHHHCCCC-C
Q ss_conf 29999790899999999997898599982885555-------------783688878899999988994788860471-2
Q gi|254780842|r 5 DVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQ-------------DLRTTMLMGEGIDFLKEINVWDFLQDIAEP-V 70 (384)
Q Consensus 5 DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~-------------~~r~~~l~~~s~~~L~~lGl~~~l~~~~~~-~ 70 (384)
T Consensus 3 siaIVGaGiAGl~aA~~L~~aG~~vtV~eKg~GvGGRlAtRRl~~g~~DhGAqYfk~~~~~F~~~V---e~~~~~glV~~ 79 (331)
T COG3380 3 SIAIVGAGIAGLAAAYALREAGREVTVFEKGRGVGGRLATRRLDGGRFDHGAQYFKPRDELFLRAV---EALRDDGLVDV 79 (331)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHEECCCCCCCCCCCEEECCCCHHHHHHH---HHHHHCCCEEE
T ss_conf 479975636889999999866957999973887553110000578653455504157865799999---99986785430
Q ss_pred CCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCC-E
Q ss_conf 341899425765545444345022287531201110000000012366479832342056530268717898302320-1
Q gi|254780842|r 71 SSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFDALANEIQIGEEEVTILLSTGQ-Q 149 (384)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~~~v~~i~~~~~~v~v~~~dg~-~ 149 (384)
T Consensus 80 W~~~~~~~~~~~-~~~~~d----~--~pyvg-~pgmsalak~LAtdL-----~V~~~~rVt~v~~~~~~W~l~~~~g~~~ 146 (331)
T COG3380 80 WTPAVWTFTGDG-SPPRGD----E--DPYVG-EPGMSALAKFLATDL-----TVVLETRVTEVARTDNDWTLHTDDGTRH 146 (331)
T ss_pred CCCCCCCCCCCC-CCCCCC----C--CCCCC-CCCHHHHHHHHHCCC-----HHHHHHHHHHHEECCCEEEEEECCCCCC
T ss_conf 351110113688-899888----7--76236-743679999872450-----4344223143123387168984688764
Q ss_pred EEEEEEEEEC--------------CCCCCCCCCCCCCCCCCCCCEE-EEEEEEC--CCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 2111235303--------------7543200037873322224304-7876411--478861178872278754210001
Q gi|254780842|r 150 IVGQFLIGSD--------------GRNSSVRRQMGYGENKWSYPQK-ALVLNFQ--HSMPHNGRCVEFHKSLGTITQIPL 212 (384)
Q Consensus 150 i~adlvVgAD--------------G~~S~vR~~l~~~~~~~~y~~~-~l~~~~~--~~~~~~~~a~~~f~~~G~~a~lP~ 212 (384)
T Consensus 147 ~~~d~vvla~PAPQ~~~LLt~~~~~~p~~l~~~~----a~V~y~Pc~s~~lg~~q~l~~P~~G----~~vdg~~laWla~ 218 (331)
T COG3380 147 TQFDDVVLAIPAPQTATLLTTDADDLPAALRAAL----ADVVYAPCWSAVLGYPQPLDRPWPG----NFVDGHPLAWLAR 218 (331)
T ss_pred CCCCEEEEECCCCCCHHHCCCCCCCCHHHHHHHH----CCCEEHHHHHHHHCCCCCCCCCCCC----CCCCCCEEEEEEC
T ss_conf 5534389936887531221755454369999763----2514205899984688667888898----6217870022000
Q ss_pred C---CCC----EEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCEEEEEECC----CCCC---CHHHHH
Q ss_conf 2---320----112675075673245532234678877630675467621---1102232022----3343---045653
Q gi|254780842|r 213 R---ENF----SSLVWIMESQEADFYYKLPVNEIARRLEQYLYPVIGKIE---VVTDVQIFQL----SGMI---SHCFGK 275 (384)
Q Consensus 213 ~---~~~----~~ivw~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~pl----~~~~---~~~~~~ 275 (384)
T Consensus 219 d~sK~g~~p~~~~~vvqasp~wSr~h~~~~~e~~i~~l~aA~~~~~~~~~~~p~~s~~H~WrYA~P~~~~~~~~L~ad~~ 298 (331)
T COG3380 219 DASKKGHVPDGEIWVVQASPDWSREHLDHPAEQVIVALRAAAQELDGDRLPEPDWSDAHRWRYAIPNDAVAGPPLDADRE 298 (331)
T ss_pred CCCCCCCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34678878768659997082677976269878899999875200447778860577750431036530104775115778
Q ss_pred CCCCEECCCCCC
Q ss_conf 794210110011
Q gi|254780842|r 276 KRVVLVGEAAHA 287 (384)
Q Consensus 276 ~rv~liGDAAH~ 287 (384)
T Consensus 299 ~~l~~cGDwc~G 310 (331)
T COG3380 299 LPLYACGDWCAG 310 (331)
T ss_pred CCEEEECCCCCC
T ss_conf 762664033457