HHsearch alignment for GI: 254780842 and conserved domain: PRK04176
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional.
Probab=98.86 E-value=2.1e-08 Score=80.53 Aligned_cols=132 Identities=19% Similarity=0.226 Sum_probs=77.5
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC---CE-----EEECHHHHHHHHHCCCHHHHHHCCCCCCCEEE
Q ss_conf 02999979089999999999789859998288555578---36-----88878899999988994788860471234189
Q gi|254780842|r 4 FDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQDL---RT-----TMLMGEGIDFLKEINVWDFLQDIAEPVSSFRL 75 (384)
Q Consensus 4 ~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~~~---r~-----~~l~~~s~~~L~~lGl~~~l~~~~~~~~~~~~ 75 (384)
T Consensus 26 ~DVvIVGaGpsGLtAAy~LAk~g~Kv~i~E~~ls~GGG~WgGGmlf~~iVv~~~a~~iLde~gi~---------y~~~-- 94 (257)
T PRK04176 26 VDVAIVGAGPSGLTAAYYLAKAGLKVAVFERKLSFGGGIWGGGMLFNKIVVQEEADEILDEFGIR---------YKEV-- 94 (257)
T ss_pred CCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCCHHHHCCHHHHHHHHCCCC---------CEEC--
T ss_conf 68899888827999999998689659999713468886313000133454005379999984997---------3335--
Q ss_pred EECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCC-EEEEEECCC-CEEE---EEEC------
Q ss_conf 9425765545444345022287531201110000000012366479832342-056530268-7178---9830------
Q gi|254780842|r 76 VDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFD-ALANEIQIG-EEEV---TILL------ 144 (384)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~-~~v~~i~~~-~~~v---~v~~------ 144 (384)
T Consensus 95 ---~~g-------------------~~v~d~~~~~s~L~~~a~~aG-akifn~~~VEDli~r~~~rV~GvV~NWt~V~~~ 151 (257)
T PRK04176 95 ---EDG-------------------LYVADSVEAAAKLAAGAIDAG-AKIFNGVSVEDVIIREDGRVAGVVINWTPVEMA 151 (257)
T ss_pred ---CCC-------------------EEEECHHHHHHHHHHHHHHCC-CEEEECCEEEEEEEECCCCEEEEEECCHHHHHH
T ss_conf ---896-------------------399508999999999997479-889823044215661288178999625775640
Q ss_pred ---CCCCEEEEEEEEEECCCCCCCCCCC
Q ss_conf ---2320121112353037543200037
Q gi|254780842|r 145 ---STGQQIVGQFLIGSDGRNSSVRRQM 169 (384)
Q Consensus 145 ---~dg~~i~adlvVgADG~~S~vR~~l 169 (384)
T Consensus 152 glhvDP~~i~ak~VvdaTGHda~v~~~~ 179 (257)
T PRK04176 152 GLHVDPLTIEAKAVVDATGHDAEVVSVL 179 (257)
T ss_pred CCCCCCCEECCCEEEECCCCCHHHHHHH
T ss_conf 3555852011368998889860899999