HHsearch alignment for GI: 254780842 and conserved domain: PRK05714
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.
Probab=100.00 E-value=0 Score=567.98 Aligned_cols=377 Identities=22% Similarity=0.381 Sum_probs=342.3
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC---------CCCCEEEECHHHHHHHHHCCCHHHHHH-CCCCC
Q ss_conf 97002999979089999999999789859998288555---------578368887889999998899478886-04712
Q gi|254780842|r 1 MNHFDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFL---------QDLRTTMLMGEGIDFLKEINVWDFLQD-IAEPV 70 (384)
Q Consensus 1 M~~~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~---------~~~r~~~l~~~s~~~L~~lGl~~~l~~-~~~~~ 70 (384)
T Consensus 1 m~-~DV~IvGaGpvGl~lAl~L~~~G~~v~lie~~~~~~~~~~~~~~~~~R~~al~~~s~~~L~~lG~~~~l~~~~~~p~ 79 (405)
T PRK05714 1 MR-ADLLIVGAGMVGSALALALEGSGLEVLLVDGGPLSVKPFDPQAPFEPRVSALSAASQRILERLGAWDGIAARRASPY 79 (405)
T ss_pred CC-CCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 99-88999990599999999996189978999589977787766778984255677998999998798165687357761
Q ss_pred CCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEE
Q ss_conf 34189942576554544434502228753120111000000001236647983234205653026871789830232012
Q gi|254780842|r 71 SSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFDALANEIQIGEEEVTILLSTGQQI 150 (384)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~~~v~~i~~~~~~v~v~~~dg~~i 150 (384)
T Consensus 80 ~~~~v~d~~~~----~~~~f~~~~~~~~~lg~vv~~~~l~~~L~~~l~~~~v~~~~~~~v~~~~~~~~~~~v~l~~g~~i 155 (405)
T PRK05714 80 SDMQVWDGSGT----GQIHFSAASVHAEVLGHIVENRVVQDALLERLHDSDIGLLANARLEQMRRSGDDWLLTLADGRQL 155 (405)
T ss_pred EEEEEECCCCC----CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEECCCCEE
T ss_conf 24552058986----22764410147644411232699999999999727988984878999998388079996799798
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC----CEEEEEEECHH
Q ss_conf 11123530375432000378733222243047876411478861178872278754210001232----01126750756
Q gi|254780842|r 151 VGQFLIGSDGRNSSVRRQMGYGENKWSYPQKALVLNFQHSMPHNGRCVEFHKSLGTITQIPLREN----FSSLVWIMESQ 226 (384)
Q Consensus 151 ~adlvVgADG~~S~vR~~l~~~~~~~~y~~~~l~~~~~~~~~~~~~a~~~f~~~G~~a~lP~~~~----~~~ivw~~~~~ 226 (384)
T Consensus 156 ~a~llVgADG~~S~vR~~~gi~~~~~~y~q~alv~~v~~~~~~~~~a~q~F~~~Gpla~lPl~~~~~~~~~s~vws~~~~ 235 (405)
T PRK05714 156 RAPLVVAADGANSAVRRLAGCATREWDYLHHAIVTSVRCSAPHRATAWQRFTDDGPLAFLPLERDGDEHWCSIVWSTTPE 235 (405)
T ss_pred ECCEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCHH
T ss_conf 63889995899856665135675023556448998411378766257999769997599974579976679999708889
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 73245532234678877630675467621110223202233430456537942101100113844565321121238999
Q gi|254780842|r 227 EADFYYKLPVNEIARRLEQYLYPVIGKIEVVTDVQIFQLSGMISHCFGKKRVVLVGEAAHALPPICGQGLNLSMRDVIIL 306 (384)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~rv~liGDAAH~~~P~~GqG~n~ai~Da~~L 306 (384)
T Consensus 236 ~a~~~~~~~~~~~~~~l~~~~~~~lg~i~~~~~~~~~pl~~~~a~~~~~~rv~LiGDAAH~~hP~aGQGlNlGl~Da~~L 315 (405)
T PRK05714 236 EAERLMALDDDAFCAALERAFEGRLGEVLSADPRLCVPLRQRHAKRYVEEGLALIGDAAHTIHPLAGQGVNLGFLDAAVL 315 (405)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 99987639999999999987511136448834866743626676786426732432055358973034040559999999
Q ss_pred HHHHHCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC
Q ss_conf 9998525-----79907999999998679999999999999998636798999999999999850837899999986198
Q gi|254780842|r 307 LNLFQSE-----HMSFRAIGNRYHAMRRGDIIKRIVGTDLFNRSLFSRYPLLQILRAGTFHLLKRVTPLRHQVMRQSLFL 381 (384)
Q Consensus 307 ~~~l~~~-----~~~~~~~l~~Y~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~~~R~~~l~~~~~~~~lk~~~~~~a~gl 381 (384)
T Consensus 316 a~~L~~a~~~g~~~g~~~~L~~Y~~~R~~~~~~~~~~~d~l~~lf~~~~~~l~~~R~~gl~~~~~~~~lk~~~~~~a~G~ 395 (405)
T PRK05714 316 AEVLLHAAERGERLADVRVLSRFERRRMPHNLALMAAMEGFERLFQADPLPLRWLRNTGLKLVDQMPEAKALFVRQALGL 395 (405)
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
T ss_conf 99999998629996669999999999899999999999999999869966899999999999842989999999986688
Q ss_pred C
Q ss_conf 8
Q gi|254780842|r 382 R 382 (384)
Q Consensus 382 ~ 382 (384)
T Consensus 396 ~ 396 (405)
T PRK05714 396 S 396 (405)
T ss_pred C
T ss_conf 9