HHsearch alignment for GI: 254780842 and conserved domain: PRK06263
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=98.43 E-value=5.1e-06 Score=63.10 Aligned_cols=146 Identities=24% Similarity=0.289 Sum_probs=74.9
Q ss_pred EEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC------CE--EEECH-HHHH-----HHHH-CCCH-------
Q ss_conf 002999979089999999999789859998288555578------36--88878-8999-----9998-8994-------
Q gi|254780842|r 3 HFDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQDL------RT--TMLMG-EGID-----FLKE-INVW------- 60 (384)
Q Consensus 3 ~~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~~~------r~--~~l~~-~s~~-----~L~~-lGl~------- 60 (384)
T Consensus 7 ~TDVlVIGsG~AGl~AA~~a~~~g-~vvlv~k~~~~~sG~s~~a~gg~~a~~~~~Ds~e~~~~Dt~~~g~~l~d~~lv~~ 85 (539)
T PRK06263 7 ITDVLIIGSGGAGARAAIEASQKG-TVVIVSKGLFGKSGCTVMAEGGYNAVLNPEDSFEKHFEDTMKGGAYLNDPKLVEI 85 (539)
T ss_pred ECCEEEECCHHHHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 649899995399999999998259-9799977898999847888667715089999999999999985268888999999
Q ss_pred ---------HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHH---------CCHHHHHHHHHHHCCC
Q ss_conf ---------7888604712341899425765545444345022287531201110---------0000000123664798
Q gi|254780842|r 61 ---------DFLQDIAEPVSSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPN---------HVLMESFAEKISQDPL 122 (384)
Q Consensus 61 ---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r---------~~L~~~L~~~~~~~~~ 122 (384)
T Consensus 86 l~~~a~~~v~~L~~~G~~f~~~-----~~g-------~~~~~~~g----g~s~~R~~~~~~~tG~~i~~~L~~~~~~~gv 149 (539)
T PRK06263 86 LVKEAPKRLKDLEKFGAVFDRT-----EDG-------EIAQRPFG----GQSFNRTCYAGDRTGHEMMMGLMEYLIKERI 149 (539)
T ss_pred HHHHHHHHHHHHHHHCCCCCCC-----CCC-------CEEEEECC----CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 9999999999999839985127-----998-------67310047----8544432235776619999999999861697
Q ss_pred CCCCCEEEEEECCCC-EEE----EEECCCCC--EEEEEEEEEECCCCCCC
Q ss_conf 323420565302687-178----98302320--12111235303754320
Q gi|254780842|r 123 IHCFDALANEIQIGE-EEV----TILLSTGQ--QIVGQFLIGSDGRNSSV 165 (384)
Q Consensus 123 ~~~~~~~v~~i~~~~-~~v----~v~~~dg~--~i~adlvVgADG~~S~v 165 (384)
T Consensus 150 ~i~~~~~~~~Ll~~~~g~v~Ga~~~~~~~g~~~~i~AkaVILATGG~~~l 199 (539)
T PRK06263 150 KILEEVMAIKLLVDELGKVFGAVFLDLRNGDIVPIYAKSTILATGGAGQL 199 (539)
T ss_pred EEEEEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEECEEEECCCCCCCC
T ss_conf 79951599999981799699999997789829999605699898987656