HHsearch alignment for GI: 254780842 and conserved domain: PRK08020
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed.
Probab=100.00 E-value=0 Score=568.31 Aligned_cols=375 Identities=24% Similarity=0.427 Sum_probs=342.3
Q ss_pred CC--EEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC-------CCCCCEEEECHHHHHHHHHCCCHHHHHH-CCCCC
Q ss_conf 97--00299997908999999999978985999828855-------5578368887889999998899478886-04712
Q gi|254780842|r 1 MN--HFDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSF-------LQDLRTTMLMGEGIDFLKEINVWDFLQD-IAEPV 70 (384)
Q Consensus 1 M~--~~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~-------~~~~r~~~l~~~s~~~L~~lGl~~~l~~-~~~~~ 70 (384)
T Consensus 1 M~~~~~DV~IvG~G~vGl~lAl~La~~G~~V~viE~~~~~~~~~~~~~d~R~~al~~~s~~~L~~lGvw~~~~~~~~~~~ 80 (391)
T PRK08020 1 MTNQPTEIAIVGGGMVGGALALGLAQHGFSVAVIEHAAPAPFVADSQPDVRISAISAASVALLKGLGVWDAVQAMRCHPY 80 (391)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 99999848999936999999999986699789994899876665579873389878899999998888487786256871
Q ss_pred CCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCC-CCEEEEEECCCCEEEEEECCCCCE
Q ss_conf 3418994257655454443450222875312011100000000123664798323-420565302687178983023201
Q gi|254780842|r 71 SSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHC-FDALANEIQIGEEEVTILLSTGQQ 149 (384)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~-~~~~v~~i~~~~~~v~v~~~dg~~ 149 (384)
T Consensus 81 ~~~~~~~~~~-----~~~~f~~~~~~~~~lg~~v~~~~l~~~L~~~l~~~~~v~~~~~~~v~~i~~~~~~~~v~l~~g~~ 155 (391)
T PRK08020 81 RRLETWEWET-----AHVVFDAAELKLPELGYMVENRVLQQALWQALEAHPNVTLRVPASLIALHRHDDGWELELADGET 155 (391)
T ss_pred EEEEEECCCC-----CEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCEEEEEECCCCE
T ss_conf 4898612788-----55872544328975401212699999999999838996999588026889749868999489999
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECHHHHH
Q ss_conf 21112353037543200037873322224304787641147886117887227875421000123201126750756732
Q gi|254780842|r 150 IVGQFLIGSDGRNSSVRRQMGYGENKWSYPQKALVLNFQHSMPHNGRCVEFHKSLGTITQIPLRENFSSLVWIMESQEAD 229 (384)
Q Consensus 150 i~adlvVgADG~~S~vR~~l~~~~~~~~y~~~~l~~~~~~~~~~~~~a~~~f~~~G~~a~lP~~~~~~~ivw~~~~~~~~ 229 (384)
T Consensus 156 i~a~lvIgADG~~S~vR~~~gi~~~~~~y~q~alv~~v~~~~~~~~~a~q~f~~~Gp~alLPl~~~~~slVw~~~~~~~~ 235 (391)
T PRK08020 156 IQAKLVIGADGANSQVRQMAGIGVHAWQYAQSCMLITVECENDPGDSTWQQFTPDGPRAFLPLFDNWASLVWYDSPARIR 235 (391)
T ss_pred EEECEEEEECCCCCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEECCHHHHH
T ss_conf 98379999079970544522788635787624899986146777763289980899778862589868999947877788
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 45532234678877630675467621110223202233430456537942101100113844565321121238999999
Q gi|254780842|r 230 FYYKLPVNEIARRLEQYLYPVIGKIEVVTDVQIFQLSGMISHCFGKKRVVLVGEAAHALPPICGQGLNLSMRDVIILLNL 309 (384)
Q Consensus 230 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~rv~liGDAAH~~~P~~GqG~n~ai~Da~~L~~~ 309 (384)
T Consensus 236 ~l~~~~~~~~~~~l~~~~~~~lg~i~~~~~-~~fpl~~~~a~~~~~~rvvLiGDAAH~ihP~aGQGlNlGl~Da~~La~~ 314 (391)
T PRK08020 236 QLQAMSMAQLQAEIAAHFPSRLGAVTPLAA-GAFPLTRRHALQYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDV 314 (391)
T ss_pred HHHCCCHHHHHHHHHHHHHHHCCEEEEEEE-EECHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 765199999999999873133260579753-0204765334364059888861423148954234142569999999999
Q ss_pred HHCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC
Q ss_conf 8525-----79907999999998679999999999999998636798999999999999850837899999986198
Q gi|254780842|r 310 FQSE-----HMSFRAIGNRYHAMRRGDIIKRIVGTDLFNRSLFSRYPLLQILRAGTFHLLKRVTPLRHQVMRQSLFL 381 (384)
Q Consensus 310 l~~~-----~~~~~~~l~~Y~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~~~R~~~l~~~~~~~~lk~~~~~~a~gl 381 (384)
T Consensus 315 L~~~~~~~~~~g~~~~L~~Y~~~R~~d~~~~~~~~d~l~~~f~~~~~~~~~~R~~gl~~~~~~~~lk~~~~~~a~Gl 391 (391)
T PRK08020 315 LVNARSYGEAWASYPVLKRYQRRRMADNFMMQSGMDLFYAGFSNNLPPLRFARNLGLMAAQRAGVLKRQALKYALGL 391 (391)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
T ss_conf 99998608996609999999999899999999999999999869967999999999999854999999999986699