HHsearch alignment for GI: 254780842 and conserved domain: PRK08849
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.
Probab=100.00 E-value=0 Score=569.61 Aligned_cols=375 Identities=26% Similarity=0.466 Sum_probs=340.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC-C------CCCCCEEEECHHHHHHHHHCCCHHHHHHC-CCCCCC
Q ss_conf 970029999790899999999997898599982885-5------55783688878899999988994788860-471234
Q gi|254780842|r 1 MNHFDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRS-F------LQDLRTTMLMGEGIDFLKEINVWDFLQDI-AEPVSS 72 (384)
Q Consensus 1 M~~~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~-~------~~~~r~~~l~~~s~~~L~~lGl~~~l~~~-~~~~~~ 72 (384)
T Consensus 1 M~~~DV~IvGaG~vGl~lAl~La~~G~~V~iiE~~~p~~~~~~~~~~~R~~al~~~s~~~L~~lG~~~~i~~~~~~~~~~ 80 (384)
T PRK08849 1 MNKYDIAVVGGGMVGAATAIGFAKQGRSVAVIEGFEPKAFEASQPMDIRVSAISQNSVDLLESLGAWSSIVAMRVCPYKR 80 (384)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHCCCCCCCE
T ss_conf 98189999992499999999999579959999689987666667877056786799999999879864687614786002
Q ss_pred EEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCC-CCEEEEEECCCCEEEEEECCCCCEEE
Q ss_conf 18994257655454443450222875312011100000000123664798323-42056530268717898302320121
Q gi|254780842|r 73 FRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHC-FDALANEIQIGEEEVTILLSTGQQIV 151 (384)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~-~~~~v~~i~~~~~~v~v~~~dg~~i~ 151 (384)
T Consensus 81 ~~~~~~~-----~~~~~f~~~~~~~~~lg~iv~~~~l~~~L~~~~~~~~~i~~~~~~~v~~~~~~~~~~~v~l~~g~~i~ 155 (384)
T PRK08849 81 LETWEHP-----ECRTRFHSDELNLDQLGYIVENRLIQLGLWQQFAQYPNLTLLCPEKLKDLEFSAEGNRVTLESGAEIE 155 (384)
T ss_pred EEEECCC-----CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCEEEEEECCCCEEE
T ss_conf 5530177-----64412485343863000034379999999999984899199838778898853881499978999998
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHHH
Q ss_conf 11235303754320003787332222430478764114788611788722787542100012320112675075673245
Q gi|254780842|r 152 GQFLIGSDGRNSSVRRQMGYGENKWSYPQKALVLNFQHSMPHNGRCVEFHKSLGTITQIPLRENFSSLVWIMESQEADFY 231 (384)
Q Consensus 152 adlvVgADG~~S~vR~~l~~~~~~~~y~~~~l~~~~~~~~~~~~~a~~~f~~~G~~a~lP~~~~~~~ivw~~~~~~~~~~ 231 (384)
T Consensus 156 a~llIgADG~~S~vR~~~gi~~~~~~y~q~~~v~~v~~~~~~~~~a~q~f~~~gp~a~lPl~~~~~s~vw~~~~~~~~~~ 235 (384)
T PRK08849 156 AKWVIGADGANSQVRQLAGIGITAWDYRQHCMLINVETEQPQQDITWQQFTPSGPRSFLPLQGNQGSLVWYDSPKRIKQL 235 (384)
T ss_pred EEEEEEEECCCHHHHHHCCCCEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEECCHHHHHHH
T ss_conf 54799920786466773388545047745899999852688777508998499972798627996689996587779875
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 53223467887763067546762111022320223343045653794210110011384456532112123899999985
Q gi|254780842|r 232 YKLPVNEIARRLEQYLYPVIGKIEVVTDVQIFQLSGMISHCFGKKRVVLVGEAAHALPPICGQGLNLSMRDVIILLNLFQ 311 (384)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~rv~liGDAAH~~~P~~GqG~n~ai~Da~~L~~~l~ 311 (384)
T Consensus 236 ~~~~~~~~~~~l~~~~~~~l~~~~-~~~~~~~pl~~~~a~~~~~~rv~LiGDAAH~~~P~aGQG~N~gi~Da~~L~~~l~ 314 (384)
T PRK08849 236 SAMSPEQLRSEILRHFPAELGEFK-VLQFGSFPLTRRHAQQYVKNNCVLLGDAAHTINPLAGQGVNLGFKDVDVLLEETE 314 (384)
T ss_pred HCCCHHHHHHHHHHHHHHHCCCEE-EEEEECCHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 439989999999987303207569-9985033555333355236888997252334697212524046999999999998
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC
Q ss_conf 2579907999999998679999999999999998636798999999999999850837899999986198
Q gi|254780842|r 312 SEHMSFRAIGNRYHAMRRGDIIKRIVGTDLFNRSLFSRYPLLQILRAGTFHLLKRVTPLRHQVMRQSLFL 381 (384)
Q Consensus 312 ~~~~~~~~~l~~Y~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~~~R~~~l~~~~~~~~lk~~~~~~a~gl 381 (384)
T Consensus 315 ~~~~~~~~~L~~Y~~~R~~~~~~~~~~~d~l~~~f~~~~~~~~~~R~~~l~~~~~~~~lk~~~~~~a~Gl 384 (384)
T PRK08849 315 KQGALNDAAFARYERRRRPDNLLMQTGMDLFYKTFSNDLTPLKLLRNAALKLAEHSGPLKTQVLKYALGL 384 (384)
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC
T ss_conf 4688779999999999989999999999999999769957999999999999850889999999986699