>TIGR01377 soxA_mon sarcosine oxidase, monomeric form; InterPro: IPR006281 This set of sequences describe the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members share the same function. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate . Bacterial sarcosine oxidases have been isolated from over a dozen different organisms and fall into two major classes (1) monomeric form that contains only covalent flavin and (2) heterotetrameric (alpha, beta, gamma, delta) form that contain a covalent and noncovalent flavin, this entry represents the monomeric form.; GO: 0008115 sarcosine oxidase activity, 0046653 tetrahydrofolate metabolic process.

Probab=98.62 E-value=1.4e-06 Score=67.32 Aligned_cols=313 Identities=18% Similarity=0.170 Sum_probs=155.8 Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC-------CCCEE--EECHH---HHHHHHHCCCHHHHHHC-CCCC Q ss_conf 029999790899999999997898599982885555-------78368--88788---99999988994788860-4712 Q gi|254780842|r 4 FDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQ-------DLRTT--MLMGE---GIDFLKEINVWDFLQDI-AEPV 70 (384) Q Consensus 4 ~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~-------~~r~~--~l~~~---s~~~L~~lGl~~~l~~~-~~~~ 70 (384) T Consensus 1 fDvIVvGAG~~G~~aaY~LAK~~~~~LLleqFd~pH~rGSsHG~sRiIR~aY~Edr~Y~~m~~e~~~lWa~le~E~g~k~ 80 (401) T TIGR01377 1 FDVIVVGAGIMGCFAAYHLAKRGKKTLLLEQFDLPHSRGSSHGQSRIIRKAYPEDRFYTSMVSECYQLWAQLEKEAGTKL 80 (401) T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE T ss_conf 95799817613568999987538617887515677678887877100010267863578899999999999862147264 Q ss_pred C-CEEEEECCCCCC----------------------------CCC-CCCCCCHHCCC-CCCCCHHHHCCHHHHHHHHHHH Q ss_conf 3-418994257655----------------------------454-44345022287-5312011100000000123664 Q gi|254780842|r 71 S-SFRLVDITDRLI----------------------------TAP-DAIFHSSEIGL-DAFGYNIPNHVLMESFAEKISQ 119 (384) Q Consensus 71 ~-~~~~~~~~~~~~----------------------------~~~-~~~~~~~~~~~-~~~g~~i~r~~L~~~L~~~~~~ 119 (384) T Consensus 81 h~qT~~l~~G~k~~s~~l~~~~a~~~~~~l~H~~~~s~~l~~rf~G~i~~p~n~~g~~~~~gGvl~~~ka~~a~q~l~~~ 160 (401) T TIGR01377 81 HRQTGLLLLGPKENSQSLKTIVATLSRHGLEHELLSSKQLKQRFPGNIRVPRNEVGLLDELGGVLYAEKALRALQELAEA 160 (401) T ss_pred ECCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCEECCCCEEEEEECCCCEECHHHHHHHHHHHHHH T ss_conf 31345156315778605899999886255230331641232004762340686078874688746227899999999987 Q ss_pred CCCCCCCCEEEEEECCC----CEEEEEECCCCCEEEEEEEEEECCCCC--CCCCCCC-CCCCCCCCCEEEEEEEECCCCC Q ss_conf 79832342056530268----717898302320121112353037543--2000378-7332222430478764114788 Q gi|254780842|r 120 DPLIHCFDALANEIQIG----EEEVTILLSTGQQIVGQFLIGSDGRNS--SVRRQMG-YGENKWSYPQKALVLNFQHSMP 192 (384) Q Consensus 120 ~~~~~~~~~~v~~i~~~----~~~v~v~~~dg~~i~adlvVgADG~~S--~vR~~l~-~~~~~~~y~~~~l~~~~~~~~~ 192 (384) T Consensus 161 ~Ga~v~d~~kV~~i~~~GesGe~~vt~kt~~-~sy~a~~lvvtaGaW~s~kLl~~l~Gie~Plqplr~~--Vcywr~~~~ 237 (401) T TIGR01377 161 HGAIVRDGTKVVEIKPDGESGELLVTVKTTK-DSYQAKKLVVTAGAWTSNKLLKKLGGIELPLQPLRIN--VCYWREKEP 237 (401) T ss_pred CCCEEECCCEEEEEEECCCCCCCEEEEEEEC-CEEECCEEEEECCCCHHHHHCCCCCCEECCCCCCEEE--EEEEEEECC T ss_conf 4968734860366542676789548999727-7032135789538861234313014232676421013--647874227 Q ss_pred CCE-EE-EEEC---C---CCC-CCCC-CCCCCC--CEEEE----EEECHHHHHHHHH----HHHHHHHHHHHHCCCCCC- Q ss_conf 611-78-8722---7---875-4210-001232--01126----7507567324553----223467887763067546- Q gi|254780842|r 193 HNG-RC-VEFH---K---SLG-TITQ-IPLREN--FSSLV----WIMESQEADFYYK----LPVNEIARRLEQYLYPVI- 251 (384) Q Consensus 193 ~~~-~a-~~~f---~---~~G-~~a~-lP~~~~--~~~iv----w~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~- 251 (384) T Consensus 238 ~~~~~~id~~fP~f~~~~~~~H~iYgG~Ps~eypGL~k~~~h~G~~~DPd~r~~~~g~~~~~d~~~L~~f~~~~~pg~~d 317 (401) T TIGR01377 238 KSEGVSIDQAFPCFLVLGLNPHHIYGGLPSLEYPGLMKVAYHHGQQIDPDERDCEFGFADIEDVQILKKFVRDHLPGLKD 317 (401) T ss_pred CCCCCEECCCCCEEEEECCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC T ss_conf 64362223557735653588844741537888984068987068735865467888856788999999999985788656 Q ss_pred -CCCCCCEEEEEEC---CCCCCCHHHH--H-CCCCE-ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHH Q ss_conf -7621110223202---2334304565--3-79421-01100113844565321121238999999852579-9079999 Q gi|254780842|r 252 -GKIEVVTDVQIFQ---LSGMISHCFG--K-KRVVL-VGEAAHALPPICGQGLNLSMRDVIILLNLFQSEHM-SFRAIGN 322 (384) Q Consensus 252 -~~~~~~~~~~~~p---l~~~~~~~~~--~-~rv~l-iGDAAH~~~P~~GqG~n~ai~Da~~L~~~l~~~~~-~~~~~l~ 322 (384) T Consensus 318 s~ep~-~~~~CMYt~TPDE~FviD~hpG~~~~nvvigaG--------FSGHGFk~apvVG~iLa~lam~~~~GGG~~d~~ 388 (401) T TIGR01377 318 SEEPK-ATEVCMYTKTPDEHFVIDLHPGKYYDNVVIGAG--------FSGHGFKLAPVVGKILAELAMKLKPGGGSYDLA 388 (401) T ss_pred CCCCC-CEEECCCCCCCCCCEEEECCCCCCCCCEEEECC--------CCCCCCEECHHHHHHHHHHHCCCCCCCCCEEHH T ss_conf 65640-100046788666044651478820372379635--------677541405478889998751246898620113 Q ss_pred HHHHHH Q ss_conf 999986 Q gi|254780842|r 323 RYHAMR 328 (384) Q Consensus 323 ~Y~~~R 328 (384) T Consensus 389 ~Fs~~r 394 (401) T TIGR01377 389 IFSLRR 394 (401) T ss_pred HHCCCC T ss_conf 210686

HHsearch alignment for GI: 254780842 and conserved domain: TIGR01377