HHsearch alignment for GI: 254780842 and conserved domain: TIGR01811

>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit; InterPro: IPR011280 This entry represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes..

Probab=95.74  E-value=0.0093  Score=39.12  Aligned_cols=30  Identities=43%  Similarity=0.645  Sum_probs=27.2

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             999979089999999999789859998288
Q gi|254780842|r    6 VIIIGSGLAGSVAAIGAAKKGFLTALVSPR   35 (384)
Q Consensus         6 V~IvGaG~aGl~lA~~L~~~g~~v~iiE~~   35 (384)
T Consensus         1 viVVGtGLaG~~A~~~lae~G~~V~~F~~~   30 (620)
T TIGR01811         1 VIVVGTGLAGGSAAAKLAELGYHVKLFSYQ   30 (620)
T ss_pred             CEEECCCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             968556534789999998648851254405