HHsearch alignment for GI: 254780842 and conserved domain: TIGR02032
>TIGR02032 GG-red-SF geranylgeranyl reductase family; InterPro: IPR011777 This entry includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates..
Probab=99.94 E-value=8e-26 Score=208.53 Aligned_cols=295 Identities=20% Similarity=0.202 Sum_probs=187.4
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC--C-CEEEECHHHHHHHHHCCCHH-HHHH-----CCCCCC---
Q ss_conf 0299997908999999999978985999828855557--8-36888788999999889947-8886-----047123---
Q gi|254780842|r 4 FDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQD--L-RTTMLMGEGIDFLKEINVWD-FLQD-----IAEPVS--- 71 (384)
Q Consensus 4 ~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~~--~-r~~~l~~~s~~~L~~lGl~~-~l~~-----~~~~~~--- 71 (384)
T Consensus 1 yDVvvvGaGPaG~~aA~~~A~~G~~Vllle~~~~~r~P~k~CGg~~~~~~~~~~~~~~~d~~~L~~~P~~~~~~~~~~~~ 80 (343)
T TIGR02032 1 YDVVVVGAGPAGSSAAYRLAKKGLRVLLLEKKSFPRYPGKPCGGALSPRVLEELVLPGPDEYALKDIPKELIVNEVRTLF 80 (343)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEE
T ss_conf 93899827746899999999569738898504507988600577667001311367888861301477434542001100
Q ss_pred -CEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCC----
Q ss_conf -418994257655454443450222875312011100000000123664798323420565302687178983023----
Q gi|254780842|r 72 -SFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFDALANEIQIGEEEVTILLST---- 146 (384)
Q Consensus 72 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~~~v~~i~~~~~~v~v~~~d---- 146 (384)
T Consensus 81 ~~~~~~~~~~~~-~~----~~~~~~~~~~~~~v~~R~~fD~~L~~~A~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~dd~ 154 (343)
T TIGR02032 81 NGARIISPNGDK-VE----IPIEELAFTEEAYVIDRDAFDEFLAERAQEAGAELRLGTTVLDVEIED-KVVVEVRGGDDE 154 (343)
T ss_pred CCCEEEECCCCE-EE----ECCHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEECCEEEEEEECC-CEEEEEECCCCC
T ss_conf 143388078632-21----022211247437898526741899999975780675263761127618-368997268675
Q ss_pred -CCEEEEEEEEEECCCCCCCCC-CCC----CCCCCCCCCEEE--EEEEECCC--CC-CCEEEE---EE-CC---CCCCCC
Q ss_conf -201211123530375432000-378----733222243047--87641147--88-611788---72-27---875421
Q gi|254780842|r 147 -GQQIVGQFLIGSDGRNSSVRR-QMG----YGENKWSYPQKA--LVLNFQHS--MP-HNGRCV---EF-HK---SLGTIT 208 (384)
Q Consensus 147 -g~~i~adlvVgADG~~S~vR~-~l~----~~~~~~~y~~~~--l~~~~~~~--~~-~~~~a~---~~-f~---~~G~~a 208 (384)
T Consensus 155 ~~~~~~a~~vigADG~~S~~~~~~lg~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~D~v~v~~~~~~~qrv~ggY~W 233 (343)
T TIGR02032 155 SKGEVTAKIVIGADGARSIVAKKKLGSSATLRENK-EKRELGVALRAEVEMPVEEEVDEDFVEVYIDRGLSQRVPGGYGW 233 (343)
T ss_pred CCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCC-CHHHEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCEEE
T ss_conf 66046255899716887843212478778777775-41202455467730676762357458999788013323787068
Q ss_pred CCCCCCCCEEEEEEECH--HHHHHHHHHHHHHHHHHHHHCCC---CCCCC--CCCCEEEEEEC---CCCCC-CHHHHHCC
Q ss_conf 00012320112675075--67324553223467887763067---54676--21110223202---23343-04565379
Q gi|254780842|r 209 QIPLRENFSSLVWIMES--QEADFYYKLPVNEIARRLEQYLY---PVIGK--IEVVTDVQIFQ---LSGMI-SHCFGKKR 277 (384)
Q Consensus 209 ~lP~~~~~~~ivw~~~~--~~~~~~~~~~~~~~~~~l~~~~~---~~~~~--~~~~~~~~~~p---l~~~~-~~~~~~~r 277 (384)
T Consensus 234 ~FP~G~~~~nvG~g~~~~~~~~~~~--~~~~~~l~~f~~~~~~~~~~l~~~D~~~~~-~~~~~~WliP~~~~~~~~~~~~ 310 (343)
T TIGR02032 234 VFPKGDGTANVGVGSLPETDAAEEG--EDLKKYLKDFLAARPVAKEDLKNEDAVEVE-VIGAPKWLIPIRRPDEKLVRGN 310 (343)
T ss_pred EECCCCCEEEEEEEECCCCCCCCCC--CCHHHHHHHHHHHCCCCHHHHHCCCCCCCC-CCCCCEEEEECCCCCCCCCCCC
T ss_conf 8548886899998753651123355--667899999999648861365304770000-0133134541486322113488
Q ss_pred CCEECCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 4210110011384456532112123899999
Q gi|254780842|r 278 VVLVGEAAHALPPICGQGLNLSMRDVIILLN 308 (384)
Q Consensus 278 v~liGDAAH~~~P~~GqG~n~ai~Da~~L~~ 308 (384)
T Consensus 311 ~ll~GDAAg~V~P~~GgGI~yA~~~G~~Aa~ 341 (343)
T TIGR02032 311 VLLVGDAAGFVKPLTGGGIYYAMRAGRVAAE 341 (343)
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 8999337672267556717899999998621