HHsearch alignment for GI: 254780842 and conserved domain: TIGR02352
>TIGR02352 thiamin_ThiO glycine oxidase ThiO; InterPro: IPR012727 This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as Escherichia coli that instead use tyrosine and the ThiH protein .; GO: 0016491 oxidoreductase activity, 0050660 FAD binding.
Probab=99.07 E-value=2.5e-09 Score=87.41 Aligned_cols=214 Identities=14% Similarity=0.150 Sum_probs=117.5
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC----CCEEEECHHH---------HH-HHHHCCCHHHHHHCCCCCC
Q ss_conf 99997908999999999978985999828855557----8368887889---------99-9998899478886047123
Q gi|254780842|r 6 VIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQD----LRTTMLMGEG---------ID-FLKEINVWDFLQDIAEPVS 71 (384)
Q Consensus 6 V~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~~----~r~~~l~~~s---------~~-~L~~lGl~~~l~~~~~~~~ 71 (384)
T Consensus 1 ~~ViGGGvIGL~~A~~L~~~G~~V~l~~~~~~~g~~AS~~AaGMLAP~aE~~~~~~~~f~L~~~S~~~yp~~~~~l~~~t 80 (357)
T TIGR02352 1 VLVIGGGVIGLSVAVELAERGHSVTLLDRDPTVGGGASWAAAGMLAPVAEVEYAEDPLFDLALESLRLYPEWLEALKELT 80 (357)
T ss_pred CEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 97845318789999999974993899965860456778866433243266746767478999999997599999987317
Q ss_pred ---------CEEEEECC-------------CCCCCCCCCCCCCHHC--CCCCC------C------CHHHHCCHHHHHHH
Q ss_conf ---------41899425-------------7655454443450222--87531------2------01110000000012
Q gi|254780842|r 72 ---------SFRLVDIT-------------DRLITAPDAIFHSSEI--GLDAF------G------YNIPNHVLMESFAE 115 (384)
Q Consensus 72 ---------~~~~~~~~-------------~~~~~~~~~~~~~~~~--~~~~~------g------~~i~r~~L~~~L~~ 115 (384)
T Consensus 81 g~~~~y~~~G~l~vA~~~~d~~~l~~~~~~~~~~G~~~~~l~~~~~r~~EP~L~~~~~~a~~~p~d~~v~~r~l~~AL~~ 160 (357)
T TIGR02352 81 GLDTGYRQCGTLVVAFDEDDVEKLRQLADLQSATGMELEWLSGRALRRLEPYLSPGIRGAVYYPDDAHVDPRELLKALVK 160 (357)
T ss_pred CCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHH
T ss_conf 99512740525894078711688899999987528604650779999844252422033457486523371899999999
Q ss_pred HHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCC---CCCCCCCCCEEEEEEEEC-CCC
Q ss_conf 3664798323420565302687178983023201211123530375432000378---733222243047876411-478
Q gi|254780842|r 116 KISQDPLIHCFDALANEIQIGEEEVTILLSTGQQIVGQFLIGSDGRNSSVRRQMG---YGENKWSYPQKALVLNFQ-HSM 191 (384)
Q Consensus 116 ~~~~~~~~~~~~~~v~~i~~~~~~v~v~~~dg~~i~adlvVgADG~~S~vR~~l~---~~~~~~~y~~~~l~~~~~-~~~ 191 (384)
T Consensus 161 ~~~~lGv~i~~~~~v~~~~~~~~~~~~~~~~~~~~~ad~vV~A~G~wa~--~l~~p~~~~~rpV~-G~-~l~~~~~~~~~ 236 (357)
T TIGR02352 161 ALEKLGVEIIEEVEVQEIEARGEKVTAVVTSSGDVQADQVVLAAGAWAG--ELLGPGNLPLRPVK-GQ-MLRLEVPATLV 236 (357)
T ss_pred HHHHCCCEEEECCCEEEEECCCCEEEEECCCCCCEECCEEEEECCCCHH--HHHCCCCCCCCCCC-EE-EEEEEEECCCC
T ss_conf 9985694798625335643267669885288542655747993573334--43010102556534-05-89986407665
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 86117887227875421000123201126750
Q gi|254780842|r 192 PHNGRCVEFHKSLGTITQIPLRENFSSLVWIM 223 (384)
Q Consensus 192 ~~~~~a~~~f~~~G~~a~lP~~~~~~~ivw~~ 223 (384)
T Consensus 237 ~~~~~~~r~~v~~~~~YivPR~~G~l~vGAT~ 268 (357)
T TIGR02352 237 PLLNRPVRAVVYGRRVYIVPRRDGRLVVGATS 268 (357)
T ss_pred CCCCCCEEEEECCCCEEEEECCCCEEEEEEEC
T ss_conf 55774425641388345877589758998632