HHsearch alignment for GI: 254780842 and conserved domain: TIGR03169
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=96.34 E-value=0.057 Score=33.37 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=17.5
Q ss_pred HHCCCCEECCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 537942101100113---844565321121238999999852
Q gi|254780842|r 274 GKKRVVLVGEAAHAL---PPICGQGLNLSMRDVIILLNLFQS 312 (384)
Q Consensus 274 ~~~rv~liGDAAH~~---~P~~GqG~n~ai~Da~~L~~~l~~ 312 (384)
T Consensus 270 ~~~~VfAiGD~a~~~~~p~pk~g~---~A~~qa~~~a~Ni~~ 308 (364)
T TIGR03169 270 SHPHVFAAGDCAVITDAPRPKAGV---YAVRQAPILAANLRA 308 (364)
T ss_pred CCCCEEEECCEECCCCCCCCCCCH---HHHHHHHHHHHHHHH
T ss_conf 999999971543688999997438---899999999999999