HHsearch alignment for GI: 254780843 and conserved domain: PRK03612
>PRK03612 spermidine synthase; Provisional.
Probab=97.57 E-value=0.0025 Score=33.02 Aligned_cols=157 Identities=11% Similarity=0.002 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH---HHHHHHHHHH
Q ss_conf 9999999999998738998999999-80999899999999999999999999999998526289999---9999764321
Q gi|254780843|r 15 YIFILFFLFGGITSLNSILVPKLQN-SFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGIC---TGLLIMSLGC 90 (420)
Q Consensus 15 ~i~~~ff~~g~~~~~~~~~~p~l~~-~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~---~~~~~~~i~~ 90 (420)
T Consensus 18 lLl~~vfv~a~cgLvYEl~~~~l~s~llG~sv~qfsivIg~~L~~mGlGs~lar~~~~~~~~~F~~iEl~laligg~s~~ 97 (516)
T PRK03612 18 LLLASVAVCAACGLVYELLLSTLASYLLGDSVLQFSLIIGLYLFAMGVGALLSKYIRDDAAAGFVAVELLLALLGGLSAL 97 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999954099999999999999999999998663000678899999999999887999
Q ss_pred HCCH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 0000-001320246789998877756788876531000012303578877664431100003454788888641234204
Q gi|254780843|r 91 ILFT-ATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 91 ll~~-~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
T Consensus 98 ~l~~~fa~~~~~~~~l~~~~~~iG~LiG~EiPLl~rl~~~~~-~~~~~~~vg~v~a~DylGaliGsl~f~flLlP~lGl~ 176 (516)
T PRK03612 98 ILYAVFAFLGGQQLPLVLATLLIGLLIGMEIPLLMRILQRGR-DAHAGHNVATVLAADYLGALVGGLAFPFLLLPRLGLL 176 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999976568999999999999998527899999998622-0022246788886764678899999999998763267
Q ss_pred HHH
Q ss_conf 677
Q gi|254780843|r 170 NTS 172 (420)
Q Consensus 170 ~~~ 172 (420)
T Consensus 177 ~~~ 179 (516)
T PRK03612 177 RTA 179 (516)
T ss_pred HHH
T ss_conf 899