HHsearch alignment for GI: 254780843 and conserved domain: PRK09952
>PRK09952 shikimate transporter; Provisional.
Probab=100.00 E-value=3.4e-32 Score=177.69 Aligned_cols=386 Identities=11% Similarity=0.008 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-CCCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 5999999999999999987389989999-9980-999899999999-----99999999999999999852628999999
Q gi|254780843|r 10 QCTKIYIFILFFLFGGITSLNSILVPKL-QNSF-SLTYLQAMLVEA-----IFFSCYFFFSIPAGMFIQRYGYIKGICTG 82 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~~~~~~~~~p~l-~~~~-~~s~~~~g~i~s-----~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~ 82 (420)
T Consensus 21 rr~~~a~~~G~~lE~yDf~iy~~~a~~i~~~~FFp~~~~~~~ll~~~~~fa~gfl~RPlGg~ifG~~gDr~GRk~~L~~s 100 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLT 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 59999999888999999999999999997872499999079999999999999998758999999999730339999999
Q ss_pred HHHHHHHHHCCHHCCCCCHHHH-----HHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 9976432100000013202467-----89998877756788876531000012303578877664431100003454788
Q gi|254780843|r 83 LLIMSLGCILFTATIEITTFKV-----FLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYI 157 (420)
Q Consensus 83 ~~~~~i~~ll~~~a~~~~~~~~-----~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 157 (420)
T Consensus 101 i~~m~~~T~lig~lPty~~IGi~ApilLv~~R~lQGl~~GGE~~~a~~~~~E~~p~~~Rg~~~s~~~~~~~~G~llas~~ 180 (438)
T PRK09952 101 VWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGL 180 (438)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
T ss_conf 99999999999974768988889999999999997888761288999999996887773244049999889999999999
Q ss_pred HHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 88864123-------42046776555557789888642001121100134555543210123101233210001111222
Q gi|254780843|r 158 GSVLMLGN-------LASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDI 230 (420)
Q Consensus 158 ~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
T Consensus 181 ~~~l~~~l~~~~~~~wGWRipFlig~l~~li~----l~iR~-----~l~Esp~f---~~-~~~~~~~~~~~~p~~e~~-- 245 (438)
T PRK09952 181 VSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA----LWVRN-----GMEESAEF---EQ-QQHEQAAAKKRIPVIEAL-- 245 (438)
T ss_pred HHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHH----HHHHH-----HCCCCHHH---HH-HHHHCCCCCCCCCHHHHH--
T ss_conf 99999836888885314299999999999999----99998-----27888789---99-876233443346699999--
Q ss_pred CCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH
Q ss_conf 11111110001-11000135567789999875420122210124688899998764310011111100000000012455
Q gi|254780843|r 231 LANPRFTMGAV-CIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFA 309 (420)
Q Consensus 231 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T Consensus 246 ~~~~~~~l~~~~l~~~~~~~~y~~~~~~~~y~~~~l--~~~~~~~~~~~~i~~~i~~~~~~~~G~LsDriGRr~~~~~~~ 323 (438)
T PRK09952 246 LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNL--GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGA 323 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 986599999999999999999999999999999872--888999999999999999999999999999836349999999
Q ss_pred HHHHHHHHH---HHHCCH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 554567689---962233-6899-99999999999999999999996301565699---999999999999999999999
Q gi|254780843|r 310 TTACSLVIL---SSYTTG-FISG-WSLIAVGLFNSIMFPTIFSLASASLEDQASGG---SGIICTTISGGVIIPLGVGYL 381 (420)
Q Consensus 310 ~~~~~~~~~---~~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~i~p~i~G~l 381 (420)
T Consensus 324 l~~~l~~~p~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ElFPt~vR~TG~g~~Ynig~~i~Gg~aP~i~~~L 403 (438)
T PRK09952 324 LIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAAL 403 (438)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998438689999999999999999998899999998688605576899999999999999999999999
Q ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9961237---99999999999999999985311102
Q gi|254780843|r 382 VDIASLR---DAMFVPAVCYIIIAIYGIYCCYKENN 414 (420)
Q Consensus 382 ~d~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (420)
T Consensus 404 ~~~~~~~~~~~a~y~~~--~~~i~l~~~l~~r~~~~ 437 (438)
T PRK09952 404 VTYFGGSWHSVAIYLLA--GCLISAMTALLMKDNQR 437 (438)
T ss_pred HHHHCCCCHHHHHHHHH--HHHHHHHHHHHCCCCCC
T ss_conf 99768994799999999--99999999998055579