HHsearch alignment for GI: 254780843 and conserved domain: PRK10077
>PRK10077 xylE D-xylose transporter XylE; Provisional.
Probab=100.00 E-value=1.8e-32 Score=179.08 Aligned_cols=411 Identities=12% Similarity=0.003 Sum_probs=214.4
Q ss_pred CCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH----CC----CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97531120059999999-999999999873899899999980----99----9899999999999999999999999998
Q gi|254780843|r 1 MKDTIARNIQCTKIYIF-ILFFLFGGITSLNSILVPKLQNSF----SL----TYLQAMLVEAIFFSCYFFFSIPAGMFIQ 71 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~-~~ff~~g~~~~~~~~~~p~l~~~~----~~----s~~~~g~i~s~~~~~~~i~~~~~G~l~D 71 (420)
T Consensus 1 ~~~~~~~~~~~~~~~~a~lg~~~fGYd~~~is~~~~~~~~~~~~~~~~~~~~~~~~~g~i~s~~~iG~~iGal~~g~l~D 80 (486)
T PRK10077 1 MNTQYNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSS 80 (486)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98765769999999999999999998371684689989998436667885305789999999999999999999999987
Q ss_pred HHCHHHHHHHHHHHHHHHHHCCHH---------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHH
Q ss_conf 526289999999976432100000---------------01320246789998877756788876531000012303578
Q gi|254780843|r 72 RYGYIKGICTGLLIMSLGCILFTA---------------TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTA 136 (420)
Q Consensus 72 r~Grr~~l~~~~~~~~i~~ll~~~---------------a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r 136 (420)
T Consensus 81 r~GRk~~l~~~~~~~~i~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~R~i~G~g~G~~~~~~p~yisE~ap~~~R 160 (486)
T PRK10077 81 RFGRRDSLKIAAVLFFISAVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIR 160 (486)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 74559999999999999999987665555530312578888875799999999999855987888999999984878674
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH---HHHHHHHHH
Q ss_conf 87766443110000345478888864123-------42046776555557789888642001121100---134555543
Q gi|254780843|r 137 VSRLTFAQFFNSLGTAIFPYIGSVLMLGN-------LASPNTSMLADTMKDYQTDTARVISQMYLVLA---IILFLATWL 206 (420)
Q Consensus 137 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 206 (420)
T Consensus 161 G~~~~~~~~~~~~G~l~~~~v~~~~~~~~~~~~~~~~~WR~~~~~~~ipa~~~~~~~~~lPESPrwL~~kgr~eeA~~~l 240 (486)
T PRK10077 161 GKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYFVPESPRWLMSRGKQEQAESIL 240 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHH
T ss_conf 14756999999999999999999986078721257733899999899999999999996786709999869999999999
Q ss_pred HHCCCCCCHHH--HHH----HCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 21012310123--321----000111122211111110001110001----35567789999875420122210124688
Q gi|254780843|r 207 CWMQRNSFADH--KRN----HISFLKTLDILANPRFTMGAVCIFLYV----GAEVAIGSIMANYLMRHDTLHLDGISAGQ 276 (420)
Q Consensus 207 ~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (420)
T Consensus 241 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~q~~Gi~~i~~y~~~i~~-~--~g~~~~~~~~ 316 (486)
T PRK10077 241 RKIMGNTLATQALQEIKHSLDHGRKTGGRLLMFG-VGVIVIGVLLSVFQQFVGINVVLYYAPEIFK-T--LGASTDIALL 316 (486)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--CCCCCCHHHH
T ss_conf 9983983078999999999999887544777514-2999999999999999815459963999999-8--3998746999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH---C--CHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 899998764310011111100000000012455554567689962---2--336899999999999-9999999999999
Q gi|254780843|r 277 HTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSY---T--TGFISGWSLIAVGLF-NSIMFPTIFSLAS 350 (420)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~g~~-~~~~~~~~~~~~~ 350 (420)
T Consensus 317 ~~~~~~~~~~~~~~~~~~lvdr~GRR~lli~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~gp~~~~~~s 396 (486)
T PRK10077 317 QTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLS 396 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998877999999987253877999999999999999999998853141899999999999999879899884238
Q ss_pred HHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 63015656999-999-99999999999999999------9961237999999999999999999853111020
Q gi|254780843|r 351 ASLEDQASGGS-GII-CTTISGGVIIPLGVGYL------VDIASLRDAMFVPAVCYIIIAIYGIYCCYKENNF 415 (420)
Q Consensus 351 ~~~~~~~~~~~-~~~-~~~~~g~~i~p~i~G~l------~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (420)
T Consensus 397 EifPt~iR~~g~~i~~~~~~~~~~iv~~~~p~l~~~~~~~~~~~~~~~~~if~~~~~i~~~~~~~~~PETKGr 469 (486)
T PRK10077 397 EIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGK 469 (486)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCC
T ss_conf 4166607999999999999999999999999999877677761316999999999999999986041279789