HHsearch alignment for GI: 254780843 and conserved domain: PRK10473
>PRK10473 multidrug efflux system protein MdtL; Provisional.
Probab=100.00 E-value=1.4e-45 Score=244.69 Aligned_cols=379 Identities=13% Similarity=0.074 Sum_probs=260.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999873899899999980999899999999999999999999999998526289999999976432100000
Q gi|254780843|r 16 IFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILFTA 95 (420)
Q Consensus 16 i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~~~ 95 (420)
T Consensus 8 ~~~l~~l~plaiD~ylPalP~i~~~f~~s~~~~qltis~f~~g~a~~ql~~GplsD~~GRr~vll~gl~l~~i~s~~~~~ 87 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGALLFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999996199999997979999999999999999999999899999848839999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 01320246789998877756788876531000012303578877664431100003454788888641234204677655
Q gi|254780843|r 96 TIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSMLA 175 (420)
Q Consensus 96 a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 175 (420)
T Consensus 88 a---~~~~~ll~~R~lqG~g~~~~~v~~~aii~D~~~~~~~~~~~s~~~~~~~~~p~~aP~lGg~l~~~~gW~~~F~~l~ 164 (392)
T PRK10473 88 A---ETSSLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMA 164 (392)
T ss_pred H---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 6---3699999999999968877999999999997699999799899999999988888889999998749499999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 55577898886420011211001345555432101231012332100011112221111111000111000135567789
Q gi|254780843|r 176 DTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGS 255 (420)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (420)
T Consensus 165 ~~~~l~~l~~~~~lp---------------ET~~~~~-----~~~~~~~~~~~~~l~~r~fl~~~l~~~l~~~~~f~fis 224 (392)
T PRK10473 165 AMGIAVLLLSLFILK---------------ETRPARA-----PAASSKPRENSESLLNRFFLSRLVITTLSVSVILTFVN 224 (392)
T ss_pred HHHHHHHHHHHHHCC---------------CCCCCCC-----CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999687---------------8899876-----64024899999998082379999999999999999998
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHH
Q ss_conf 999875420122210124688899998764310011111100000000012455554567689962-2336899999999
Q gi|254780843|r 256 IMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSY-TTGFISGWSLIAV 334 (420)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 334 (420)
T Consensus 225 ~sp~i--~~~~~gls~~~fg~~f~~~~~~~~~gs~l~~~l~~r~g~~~ll~~g~~l~l~~~~~l~~~~~~~~~l~~~~l~ 302 (392)
T PRK10473 225 TSPVL--LMEQMGFERGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGFTLI 302 (392)
T ss_pred HCHHH--HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 07999--9999189889999999999999999999999999995799999999999999999999988888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q ss_conf 99999999999999996301565699999999-9999999999999999961237999999999999999-999853111
Q gi|254780843|r 335 GLFNSIMFPTIFSLASASLEDQASGGSGIICT-TISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIAI-YGIYCCYKE 412 (420)
Q Consensus 335 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~ 412 (420)
T Consensus 303 ~~g~~~~~~~~~a~Al~~~~~~AGtASal~G~~q~~~~al~~~l~~~l~~~~~-~~~~~~m~~~s~lal~~~l~v~~~~~ 381 (392)
T PRK10473 303 CAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGISAW-NMLIGILIACSIVSLLLILFVAPGRP 381 (392)
T ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999966575141199999999999999999999998678847-89999999999999999999818987
Q ss_pred HCCCCCCC
Q ss_conf 02012797
Q gi|254780843|r 413 NNFEQNTP 420 (420)
Q Consensus 413 ~~~~~~~P 420 (420)
T Consensus 382 ~~~~~~~~ 389 (392)
T PRK10473 382 VAAHEEIP 389 (392)
T ss_pred CCCCCCCC
T ss_conf 86767899