HHsearch alignment for GI: 254780843 and conserved domain: PRK10504
>PRK10504 multidrug efflux system protein MdtE; Provisional.
Probab=100.00 E-value=2.2e-42 Score=228.74 Aligned_cols=378 Identities=16% Similarity=0.139 Sum_probs=263.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
Q ss_conf 97531120059999999999999999873899899999980999899999999999999999999999998526289999
Q gi|254780843|r 1 MKDTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGIC 80 (420)
Q Consensus 1 m~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~ 80 (420)
T Consensus 1 ~~~~p~-~~rW~l~iv~l~~Fm~~ld~TivnvALP~i~~~l~~s~~~~~Wv~taY~L~~a~~~p~~G~laDrfG~rrvf~ 79 (471)
T PRK10504 1 MTDLPD-STRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFF 79 (471)
T ss_pred CCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 999997-5379999999999999999979999999999986988737999999999999999999999999948779999
Q ss_pred HHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99997643210000001320246789998877756788876531000012303578877664431100003454788888
Q gi|254780843|r 81 TGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSV 160 (420)
Q Consensus 81 ~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 160 (420)
T Consensus 80 ~gl~~F~~gSllca~A---~s~~~Li~~R~lQGiG~a~~~P~~~~ii~~~~p~~~~~~a~g~~~~~~~~g~~lGP~lGG~ 156 (471)
T PRK10504 80 TAIVLFTLGSLFCALS---GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQIGPLLGPALGGL 156 (471)
T ss_pred HHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 9999999999999971---7789999999998527621023034103423776889999999999999998853121001
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH------------HHHHHHCCCCCCH-------------
Q ss_conf 641234204677655555778988864200112110013455------------5543210123101-------------
Q gi|254780843|r 161 LMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFL------------ATWLCWMQRNSFA------------- 215 (420)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~------------- 215 (420)
T Consensus 157 l~~~~~WrwiF~invPi~ii~~~~~~~~~p~~~~~~~~~D~~G~~l~~~~l~~l~~~l~~~~~~~~~~~~~~~l~~~~~~ 236 (471)
T PRK10504 157 LVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSKGTGLSPLAIAGLVAVGVV 236 (471)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 01101023598760699999999999948876655566782879999999999999992677777546999999999999
Q ss_pred ------HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf ------23321000111122211111110001110001355677899998754201222101246888999987643100
Q gi|254780843|r 216 ------DHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGR 289 (420)
Q Consensus 216 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (420)
T Consensus 237 ~~~~f~~~~~r~~~Pll~l~Lfr~r~f~~~~~~~~~~~~~~~~~~fl~pl~l--Q~~~G~Sp~~aGl~llP~~~~~~~~~ 314 (471)
T PRK10504 237 ALVLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFL--QIGLGFSPFHAGLMMIPMVLGSMGMK 314 (471)
T ss_pred HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999998189886498993631699999999999999999999999999--99659889999999999999999999
Q ss_pred CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf 111111000000000124555545676899622----3368999999999999999999999999630156-56999999
Q gi|254780843|r 290 FIGTWILSRFSAEKTLCAFATTACSLVILSSYT----TGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII 364 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 364 (420)
T Consensus 315 ~~~g~l~~r~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~g~~l~~~~~~~~~~~~vp~~~~g~as~l~ 394 (471)
T PRK10504 315 RIVVQVVNRFGYRRVLVATTLGLALVSLLFMTVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLL 394 (471)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHH
T ss_conf 99999988608358999999999999999998703454999999999999999999999999998639977416499999
Q ss_pred -HHHHHHHHHHHHHHHHHHHH
Q ss_conf -99999999999999999996
Q gi|254780843|r 365 -CTTISGGVIIPLGVGYLVDI 384 (420)
Q Consensus 365 -~~~~~g~~i~p~i~G~l~d~ 384 (420)
T Consensus 395 ~~~rqlg~slGvAv~g~~l~~ 415 (471)
T PRK10504 395 SMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998