HHsearch alignment for GI: 254780843 and conserved domain: PRK10504

>PRK10504 multidrug efflux system protein MdtE; Provisional.
Probab=100.00  E-value=2.2e-42  Score=228.74  Aligned_cols=378  Identities=16%  Similarity=0.139  Sum_probs=263.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
Q ss_conf             97531120059999999999999999873899899999980999899999999999999999999999998526289999
Q gi|254780843|r    1 MKDTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGIC   80 (420)
Q Consensus         1 m~~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~   80 (420)
T Consensus         1 ~~~~p~-~~rW~l~iv~l~~Fm~~ld~TivnvALP~i~~~l~~s~~~~~Wv~taY~L~~a~~~p~~G~laDrfG~rrvf~   79 (471)
T PRK10504          1 MTDLPD-STRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFF   79 (471)
T ss_pred             CCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf             999997-5379999999999999999979999999999986988737999999999999999999999999948779999


Q ss_pred             HHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             99997643210000001320246789998877756788876531000012303578877664431100003454788888
Q gi|254780843|r   81 TGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSV  160 (420)
Q Consensus        81 ~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~  160 (420)
T Consensus        80 ~gl~~F~~gSllca~A---~s~~~Li~~R~lQGiG~a~~~P~~~~ii~~~~p~~~~~~a~g~~~~~~~~g~~lGP~lGG~  156 (471)
T PRK10504         80 TAIVLFTLGSLFCALS---GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQIGPLLGPALGGL  156 (471)
T ss_pred             HHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf             9999999999999971---7789999999998527621023034103423776889999999999999998853121001


Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH------------HHHHHHCCCCCCH-------------
Q ss_conf             641234204677655555778988864200112110013455------------5543210123101-------------
Q gi|254780843|r  161 LMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFL------------ATWLCWMQRNSFA-------------  215 (420)
Q Consensus       161 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~-------------  215 (420)
T Consensus       157 l~~~~~WrwiF~invPi~ii~~~~~~~~~p~~~~~~~~~D~~G~~l~~~~l~~l~~~l~~~~~~~~~~~~~~~l~~~~~~  236 (471)
T PRK10504        157 LVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSKGTGLSPLAIAGLVAVGVV  236 (471)
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf             01101023598760699999999999948876655566782879999999999999992677777546999999999999


Q ss_pred             ------HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             ------23321000111122211111110001110001355677899998754201222101246888999987643100
Q gi|254780843|r  216 ------DHKRNHISFLKTLDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGR  289 (420)
Q Consensus       216 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (420)
T Consensus       237 ~~~~f~~~~~r~~~Pll~l~Lfr~r~f~~~~~~~~~~~~~~~~~~fl~pl~l--Q~~~G~Sp~~aGl~llP~~~~~~~~~  314 (471)
T PRK10504        237 ALVLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFL--QIGLGFSPFHAGLMMIPMVLGSMGMK  314 (471)
T ss_pred             HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999998189886498993631699999999999999999999999999--99659889999999999999999999


Q ss_pred             CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf             111111000000000124555545676899622----3368999999999999999999999999630156-56999999
Q gi|254780843|r  290 FIGTWILSRFSAEKTLCAFATTACSLVILSSYT----TGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII  364 (420)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  364 (420)
T Consensus       315 ~~~g~l~~r~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~g~~l~~~~~~~~~~~~vp~~~~g~as~l~  394 (471)
T PRK10504        315 RIVVQVVNRFGYRRVLVATTLGLALVSLLFMTVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLL  394 (471)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHH
T ss_conf             99999988608358999999999999999998703454999999999999999999999999998639977416499999


Q ss_pred             -HHHHHHHHHHHHHHHHHHHH
Q ss_conf             -99999999999999999996
Q gi|254780843|r  365 -CTTISGGVIIPLGVGYLVDI  384 (420)
Q Consensus       365 -~~~~~g~~i~p~i~G~l~d~  384 (420)
T Consensus       395 ~~~rqlg~slGvAv~g~~l~~  415 (471)
T PRK10504        395 SMIMQLSMSIGVTIAGLLLGL  415 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999998