HHsearch alignment for GI: 254780843 and conserved domain: PRK11043
>PRK11043 inner membrane transport protein YdhC; Provisional.
Probab=100.00 E-value=3e-43 Score=233.10 Aligned_cols=376 Identities=14% Similarity=0.080 Sum_probs=259.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 59999999999999999873899899999980999899999999999999999999999998526289999999976432
Q gi|254780843|r 10 QCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLG 89 (420)
Q Consensus 10 ~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~ 89 (420)
T Consensus 5 ~~~l~lLa~l~algplaiDiyLPalP~ia~~f~~~~~~~qltls~fl~g~a~gql~~GplsD~~GRr~~ll~gl~~~~~~ 84 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSIFALG 84 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 68999999999999999999984299999996969999999999999999999999999998827879999999999999
Q ss_pred HHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 10000001320246789998877756788876531000012303578877664431100003454788888641234204
Q gi|254780843|r 90 CILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASP 169 (420)
Q Consensus 90 ~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 169 (420)
T Consensus 85 s~~~~~a---~~~~~li~~R~lQg~g~~~~~v~~~aiirD~~~~~~~~~~~s~~~~~~~i~p~laP~iGg~l~~~~gWr~ 161 (401)
T PRK11043 85 SLGMLWV---ESAAMLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKAQRIFATIMPLVALSPALAPLLGAWLLNHFGWQA 161 (401)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 9999988---8999999999998731014678888999841789999999999999999999999889999970478699
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 67765555577898886420011211001345555432101231012332100011112221111111000111000135
Q gi|254780843|r 170 NTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKTLDILANPRFTMGAVCIFLYVGA 249 (420)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (420)
T Consensus 162 iF~~l~~~gvll~l~~~-------------------~~~~e~~~----~~~~~~~~~y~~lL~~r~F~~~~l~~~~~~~~ 218 (401)
T PRK11043 162 IFATLFAITLLLILPTL-------------------WLKPSKKA----RNNSQDGLTFKQLLKSKTYLGNVLIFAACSAA 218 (401)
T ss_pred HHHHHHHHHHHHHHHHH-------------------HCCCCCCC----CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998-------------------65887788----87542356899998086889999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH---HHHC---C
Q ss_conf 567789999875420122210124688899998764310011111100000000012455554567689---9622---3
Q gi|254780843|r 250 EVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVIL---SSYT---T 323 (420)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~ 323 (420)
T Consensus 219 ~fayis~spfi-l~--~~G~s~~~fGl~f~~~~l~~i~Gs~l~~rl~~r~g~~~~l~~g~~l~~l~~~~l~~~~~~~~~~ 295 (401)
T PRK11043 219 FFAWLTGSPFI-ME--QMGYSPAVIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIFLAGLLSHVS 295 (401)
T ss_pred HHHHHHHHHHH-HH--HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999966999-99--9299999999999999999999999999999880899999999999999999999999870424
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3689999999999999999999999996301565699999999-999999999999999996123799999999999999
Q gi|254780843|r 324 GFISGWSLIAVGLFNSIMFPTIFSLASASLEDQASGGSGIICT-TISGGVIIPLGVGYLVDIASLRDAMFVPAVCYIIIA 402 (420)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~p~i~G~l~d~~g~~~~~~~~~~~~~~~~ 402 (420)
T Consensus 296 ~~~l~~~~~l~~~g~G~i~pn~~a~Al~~f~~~AGtASaL~G~lQ~~~gal~s~lv~~~~~~~~~~m~~~m-~~~~-~~~ 373 (401)
T PRK11043 296 IVPILIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAGLQNTLQLGLCFLASLLVSALISTPLLTTGSVM-LSTV-VLV 373 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHH-HHH
T ss_conf 99999999999999999999999999734813060999999999999999999999965369837999999-9999-999
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 999985311102012
Q gi|254780843|r 403 IYGIYCCYKENNFEQ 417 (420)
Q Consensus 403 ~~~~~~~~~~~~~~~ 417 (420)
T Consensus 374 ~l~~~-l~r~~~~~~ 387 (401)
T PRK11043 374 ALGYK-LQRHAEWGE 387 (401)
T ss_pred HHHHH-HHHHHHHHH
T ss_conf 99999-986177503