HHsearch alignment for GI: 254780843 and conserved domain: PRK11663
>PRK11663 regulatory protein UhpC; Provisional.
Probab=100.00 E-value=0 Score=275.94 Aligned_cols=403 Identities=13% Similarity=0.066 Sum_probs=270.9
Q ss_pred CCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 7531120059999999999----999999873899899999980999899999999999999999999999998526289
Q gi|254780843|r 2 KDTIARNIQCTKIYIFILF----FLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIK 77 (420)
Q Consensus 2 ~~~~~k~~~~~~i~i~~~f----f~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~ 77 (420)
T Consensus 10 ~~~~~~~yr~~r~~i~~~~fl~Y~~~y~~R~~~s~~~p~i~~e~glt~~q~G~i~s~f~~~Yal~q~~~G~L~Dr~g~r~ 89 (434)
T PRK11663 10 KHEIDARYRYWRRHIMITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNPRY 89 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 89999999999999999999999999986057998699999884979989999999999999999976799998706449
Q ss_pred HHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 99999997643210000001320246789998877756788876531000012303578877664431100003454788
Q gi|254780843|r 78 GICTGLLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYI 157 (420)
Q Consensus 78 ~l~~~~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 157 (420)
T Consensus 90 ~l~~~~~~~~~~~~~~g~~---~~~~~~~~~r~l~G~~~~~~~p~~~~~i~~Wfp~~eRg~a~gi~~~~~~vG~~l~~~l 166 (434)
T PRK11663 90 FMGIGLIATGIINILFGFS---SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLV 166 (434)
T ss_pred HHHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999974---3289999999999998560168999999998488889999999999987778888999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH-HH--CCCCCCCCCCCCC
Q ss_conf 88864123420467765555577898886420011211001345555432101231012332-10--0011112221111
Q gi|254780843|r 158 GSVLMLGNLASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKR-NH--ISFLKTLDILANP 234 (420)
Q Consensus 158 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~ 234 (420)
T Consensus 167 ~~~i~~~~gWr-~~F~~~g~~~~v~~~~~~~~~~d--~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (434)
T PRK11663 167 VGAIALHYGWR-YGMIIAGIIAIVVGLFLCWRLRD--RPQAMGLPSVGEWRHDALELAQEQEGAGLSRKEILTKYVLLNP 243 (434)
T ss_pred HHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHCCC--CHHHCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCH
T ss_conf 99999980629-99999999999999999983268--8766499971121023455543302457758999999996488
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH--CCCHHHHHHHHH
Q ss_conf 111000111000135567789999875420122210124688899998764310011111100000--000012455554
Q gi|254780843|r 235 RFTMGAVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFS--AEKTLCAFATTA 312 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 312 (420)
T Consensus 244 ~~w~~~~~~~~~~~~~~~~~~WlP~yL~~~~--g~s~~~a~~~~~l~~ig~~iG~l~~G~lSDrl~~~~r~~~~~~~~~~ 321 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYLSETL--GYDLVTANSAVSMFELGGFIGSLVAGWGSDKLFNGNRGPMNLIFAAG 321 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 9999999999999999999832658888760--88899999999999999999999888999987347731899999999
Q ss_pred H-HHH-HHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5-676-8996--223368999999999999999999999999630156-56999999-9999999999999999999612
Q gi|254780843|r 313 C-SLV-ILSS--YTTGFISGWSLIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII-CTTISGGVIIPLGVGYLVDIAS 386 (420)
Q Consensus 313 ~-~~~-~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~g~~i~p~i~G~l~d~~g 386 (420)
T Consensus 322 ~~~~~~~l~~~~~~~~~~~~~~l~~~G~~~~g~~~l~~~~~~~~~~~~~~gta~G~~n~~g~lG~~l~~~~~G~i~~~~g 401 (434)
T PRK11663 322 IFLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALAGYPLAKVLETWH 401 (434)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999983631299999999999999998999999999983682102379899889999999999999999997038
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 37999999999999999999853111
Q gi|254780843|r 387 LRDAMFVPAVCYIIIAIYGIYCCYKE 412 (420)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
T Consensus 402 w~~~f~~l~~~a~v~~~illp~~~~~ 427 (434)
T PRK11663 402 WTGFFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 58999999999999999999981767