HHsearch alignment for GI: 254780843 and conserved domain: PRK11663
>PRK11663 regulatory protein UhpC; Provisional.
Probab=99.61 E-value=6e-14 Score=86.22 Aligned_cols=130 Identities=15% Similarity=0.077 Sum_probs=67.1
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CHHHHHHH-HHH--HHHHHHHCCHHCCCCCHHHHHHHHH
Q ss_conf 999998099989999999999999999999999999852--62899999-999--7643210000001320246789998
Q gi|254780843|r 35 PKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRY--GYIKGICT-GLL--IMSLGCILFTATIEITTFKVFLIAL 109 (420)
Q Consensus 35 p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~--Grr~~l~~-~~~--~~~i~~ll~~~a~~~~~~~~~~~~~ 109 (420)
T Consensus 268 ~yL~~~~g~s~~~a~~~~~l~~ig~~iG~l~~G~lSDrl~~~~r~~~~~~~~~~~~~~~~~l--~~~-~~~~~~~~~~~l 344 (434)
T PRK11663 268 LYLSETLGYDLVTANSAVSMFELGGFIGSLVAGWGSDKLFNGNRGPMNLIFAAGIFLSVGSL--WLM-PFASYVMQAACF 344 (434)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH--HHC-CCCHHHHHHHHH
T ss_conf 88887608889999999999999999999988899998734773189999999999999999--983-631299999999
Q ss_pred HHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 8777567888765310000123035788776644311000034547888886412342
Q gi|254780843|r 110 CILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLA 167 (420)
Q Consensus 110 ~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 167 (420)
T Consensus 345 ~~~G~~~~g~~~l~~~~~~~~~~~~~~gta~G~~n~~g~lG~~l~~~~~G~i~~~~gw 402 (434)
T PRK11663 345 FTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALAGYPLAKVLETWHW 402 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999989999999999836821023798998899999999999999999970385