HHsearch alignment for GI: 254780843 and conserved domain: TIGR00710

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily; InterPro: IPR004812 The drug resistance transporter Bcr/CflA proteins are predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in Escherichia coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.42  E-value=3e-11  Score=72.72  Aligned_cols=174  Identities=11%  Similarity=0.028  Sum_probs=137.6

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             13556778999987542012221012468889999876431001111110000000001245555456768996223368
Q gi|254780843|r  247 VGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGFI  326 (420)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (420)
T Consensus        15 ~L~pl~~DMYLPa~p~i~~~L~~~as~vQ~tLt~yl~G~a~GQL~~GPlSD~~GRrPvlL~G~~~fa~~Sl~~~~~~ni~   94 (400)
T TIGR00710        15 ILGPLGIDMYLPAFPEIAKDLSVSASLVQLTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLLIFALSSLGLALSNNIE   94 (400)
T ss_pred             HHCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             63202112521207898986287866899999999999999898652333203672388999999999999999985199


Q ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999-9999999999999999996301-565--6999999999999999999999--999961237999999999999
Q gi|254780843|r  327 SGWSLI-AVGLFNSIMFPTIFSLASASLE-DQA--SGGSGIICTTISGGVIIPLGVG--YLVDIASLRDAMFVPAVCYII  400 (420)
Q Consensus       327 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~g~~i~p~i~G--~l~d~~g~~~~~~~~~~~~~~  400 (420)
T Consensus        95 ~L~~lRF~Qa~gasA~~V~~~AlvRD~Y~G~~e~s~~~s~l~~~~~~~P~~aP~~Ggai~~~~~l~WhaIF~~L~l~~~~  174 (400)
T TIGR00710        95 TLLVLRFLQAFGASAALVISQALVRDIYPGREELSKIYSILMLVLALAPAVAPLIGGAIYVLVFLSWHAIFAVLSLIGIL  174 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999998999999988850203257899999999999999987888886999999852099999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCC
Q ss_conf             99999985311102012797
Q gi|254780843|r  401 IAIYGIYCCYKENNFEQNTP  420 (420)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~P  420 (420)
T Consensus       175 l~a~~f~~~pET~~~~~r~P  194 (400)
T TIGR00710       175 LSALIFFLLPETLPKEKRIP  194 (400)
T ss_pred             HHHHHHHHCCCCCCHHCCCC
T ss_conf             99999985512274010374