HHsearch alignment for GI: 254780843 and conserved domain: TIGR00711

>TIGR00711 efflux_EmrB drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family; InterPro: IPR004638 This subfamily of drug efflux proteins, a part of the major facilitator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in Escherichia coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.; GO: 0006810 transport, 0016021 integral to membrane.
Probab=100.00  E-value=1.1e-34  Score=190.22  Aligned_cols=365  Identities=13%  Similarity=0.081  Sum_probs=278.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999999998738998999999809998999999999999999999999999985262899999999764321000
Q gi|254780843|r   14 IYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGLLIMSLGCILF   93 (420)
Q Consensus        14 i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ll~   93 (420)
T Consensus         5 ~~l~~g~FMa~LD~Tiv~va~p~~~~~lg~s~~~~~Wv~TsY~~A~a~~IPl~gwLa~R~G~r~lFl~~~~~Ft~~S~~C   84 (501)
T TIGR00711         5 IVLMLGTFMAVLDSTIVNVAIPTLAGDLGASLSQVQWVITSYMLANAIVIPLTGWLAKRFGTRKLFLISTLAFTLGSLLC   84 (501)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999987763211441002323146788899999889999987084478999999999999999


Q ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             00013202467899988777567888765310000123035788776644311000034547888886412342046776
Q gi|254780843|r   94 TATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPNTSM  173 (420)
Q Consensus        94 ~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~  173 (420)
T Consensus        85 g~A---~nl~~lIifR~~QG~~gG~l~Pl~~~~l~~~~PP~~Rg~~~~~~Gl~v~~AP~~GP~LGGwI~e~~~Wrw~F~~  161 (501)
T TIGR00711        85 GVA---NNLELLIIFRVIQGFGGGLLIPLSFSLLLNIYPPEKRGLAMAIWGLTVLVAPALGPTLGGWIIENYEWRWIFYI  161 (501)
T ss_pred             HHH---HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHCCCCHHEEEH
T ss_conf             985---20899999999988622048999999999747912158356421066874202353104688732622220212


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCHHHHHHH------------HHHH-HCCCCCCHH----------------------H-
Q ss_conf             555557789888642001121100134555------------5432-101231012----------------------3-
Q gi|254780843|r  174 LADTMKDYQTDTARVISQMYLVLAIILFLA------------TWLC-WMQRNSFAD----------------------H-  217 (420)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~----------------------~-  217 (420)
T Consensus       162 NvPiG~~v~~~a~~~l~~d~~~~~~~~~~D~~G~~L~~~g~~~Ll~~ls~g~~~GW~~~~~il~~~i~~~~~~~~fv~~s  241 (501)
T TIGR00711       162 NVPIGIIVVVVALFILPEDREKEKASKNLDFLGLLLLSVGLGSLLYVLSEGQEEGWFDSNLILILSIVGLVAIIAFVVRS  241 (501)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             57899999999999844666661666311278899999999999987521566889986315699999999999999978


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC-C
Q ss_conf             3210001111222111111100-0111000135567789999875420122210124688899998764310011111-1
Q gi|254780843|r  218 KRNHISFLKTLDILANPRFTMG-AVCIFLYVGAEVAIGSIMANYLMRHDTLHLDGISAGQHTAIYWGSAMIGRFIGTW-I  295 (420)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  295 (420)
T Consensus       242 el~~~nP~~D~~~F~~~~Ft~~f~~~~~~~~~~lyg~~~LLP~~Lq~~--~~~~~~~~Gl~~~P~gl~~~l~sPIaG~~~  319 (501)
T TIGR00711       242 ELTDDNPLVDLRLFKYRNFTIGFCVYSLLLGLGLYGAVYLLPLYLQQV--LGYTALQAGLHILPVGLAPLLSSPIAGRML  319 (501)
T ss_pred             HHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             741468800443402025788999999999999999999999999986--279978999999889999999707999998


Q ss_pred             CCHHHCCCHHHHHHHHHHHHHHHHHHC-----CHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHH
Q ss_conf             000000000124555545676899622-----33689999-99999999999999999999630156-56999999-999
Q gi|254780843|r  296 LSRFSAEKTLCAFATTACSLVILSSYT-----TGFISGWS-LIAVGLFNSIMFPTIFSLASASLEDQ-ASGGSGII-CTT  367 (420)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~  367 (420)
T Consensus       320 ~~k~~~R~l~~ig~~~~a~~~y~~~~~~~~~~~f~~~~~~G~~i~G~g~~~~fmP~~~~al~~Lp~~~~~~gs~L~n~~R  399 (501)
T TIGR00711       320 GDKIDPRLLVTIGLILYAVGFYLRAFTLTPDTDFLAIALPGQFIRGFGMGCFFMPLTTIALSKLPAEKVARGSSLSNFLR  399 (501)
T ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             41468068999999999999988852215578618888677999999999999875577761252357622689999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999
Q gi|254780843|r  368 ISGGVIIPLGVGYLVD  383 (420)
Q Consensus       368 ~~g~~i~p~i~G~l~d  383 (420)
T Consensus       400 ~~gGSiGTal~t~~~~  415 (501)
T TIGR00711       400 QLGGSIGTALITTILT  415 (501)
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             9888999999999998