HHsearch alignment for GI: 254780843 and conserved domain: TIGR00805
>TIGR00805 oat sodium-independent organic anion transporter; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced . Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane.
Probab=99.31 E-value=2e-11 Score=73.56 Aligned_cols=160 Identities=16% Similarity=0.160 Sum_probs=132.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 31120059999999999999999873899899999980999899999999999999999999999998526289999999
Q gi|254780843|r 4 TIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTGL 83 (420)
Q Consensus 4 ~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~ 83 (420)
T Consensus 26 ~~~~~~~~~~l~~~~~~~~~~l~~~l~~~~l~~IE~~F~~~~s~~G~I~~~~e~gn~~l~I~vsyFg~~~~~p~~ig~G~ 105 (723)
T TIGR00805 26 SLFSKIKVFVLLLTLAQLQGLLVNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPKVIGIGC 105 (723)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 76401269999999987625676120011203334310587677763010002301123210556303114689999868
Q ss_pred HHHHHHHHCCHHCC-------------------------------------------------CCCHHHHHHHHHHHHHH
Q ss_conf 97643210000001-------------------------------------------------32024678999887775
Q gi|254780843|r 84 LIMSLGCILFTATI-------------------------------------------------EITTFKVFLIALCILAI 114 (420)
Q Consensus 84 ~~~~i~~ll~~~a~-------------------------------------------------~~~~~~~~~~~~~i~g~ 114 (420)
T Consensus 106 ~~~~~G~l~~slPhf~~~~Y~~~~~~~~~~~~S~~~~~~c~~~~~~~L~~~~~~S~~~~~~~~~S~~~~~~~~~~~l~GI 185 (723)
T TIGR00805 106 VIMGLGSLLLSLPHFLSGRYEYSTTVSSTGNLSSANSFLCMENSTQALRPTQDPSECQKEHKETSLMWLLVLVAQLLRGI 185 (723)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99988799999778747872235212021000243045532576234201034423311222224789999999997414
Q ss_pred HHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 6788876531000012303578877664431100003454788888641
Q gi|254780843|r 115 GVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLML 163 (420)
Q Consensus 115 g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 163 (420)
T Consensus 186 G~tP~~~lGisy~ddf~~~~~sply~gi~~~~~v~GP~~G~llgS~~~~ 234 (723)
T TIGR00805 186 GETPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ 234 (723)
T ss_pred CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8876545676411125664442379999999999889999999877675