HHsearch alignment for GI: 254780843 and conserved domain: TIGR00879
>TIGR00879 SP MFS transporter, sugar porter (SP) family; InterPro: IPR003663 The sugar transporters belong to a superfamily of membrane proteins responsible for the binding and transport of various carbohydrates, organic alcohols, and acids in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . This family includes just the sugar transporters. ; GO: 0005351 sugar:hydrogen ion symporter activity, 0008643 carbohydrate transport, 0016020 membrane.
Probab=98.83 E-value=2.9e-07 Score=52.73 Aligned_cols=84 Identities=18% Similarity=0.155 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 246888999987643100111111000000000124555545676899622336----8999999999999999999999
Q gi|254780843|r 272 ISAGQHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYTTGF----ISGWSLIAVGLFNSIMFPTIFS 347 (420)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~ 347 (420)
T Consensus 134 ~~~~~~v~~~~~G~~~g~l~~g~~~~~~GRk~~l~~~~~~~v~g~~~~~~~~~~~~~~~~~~gR~l~G~g~G~~s~~~P~ 213 (572)
T TIGR00879 134 SLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIVALLFVIGAILMGAAATALSVEMLIVGRVLLGIGVGIASALVPM 213 (572)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88999999999999999987556777533626889999999999999997531020588999999999853189998999
Q ss_pred HHHHHHHH
Q ss_conf 99963015
Q gi|254780843|r 348 LASASLED 355 (420)
Q Consensus 348 ~~~~~~~~ 355 (420)
T Consensus 214 Y~sE~AP~ 221 (572)
T TIGR00879 214 YISEIAPK 221 (572)
T ss_pred HHHHCCCH
T ss_conf 89733856