HHsearch alignment for GI: 254780843 and conserved domain: TIGR00880

>TIGR00880 2_A_01_02 Multidrug resistance protein; InterPro: IPR004734 Multidrug resistance proteins are molecular pumps that participate in a low energy shock adaptive response in some bacteria. They mediate cellular resistance to toxicants such as cycloheximide (CYH), 4-nitroquinoline N-oxide (4-NQO), cadmium, and hydrogen peroxide in yeast .; GO: 0015238 drug transporter activity, 0015893 drug transport, 0016021 integral to membrane.
Probab=98.94  E-value=6.8e-08  Score=55.87  Aligned_cols=134  Identities=13%  Similarity=0.045  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC---CHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88999987643100111111000000000124555545676899622---3368999-9999999999999999999996
Q gi|254780843|r  276 QHTAIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTACSLVILSSYT---TGFISGW-SLIAVGLFNSIMFPTIFSLASA  351 (420)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~  351 (420)
T Consensus         2 ~~~~~yAl~q~~~~P~~~~l~~r~GRk~~~~~g~~~f~~~~~~~al~nPh~~~~~L~i~R~~~G~~~~~~~~~g~a~~aD   81 (148)
T TIGR00880         2 LLVAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSQALFALSNPHSNITVLIISRFLQGFGAAAALVAGAALIAD   81 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             79999999999999999998842162899999999999999998844872379999999999999888999989888877


Q ss_pred             HHHHH-HHH-HHHHH-HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             30156-569-99999-999999999999999999---961237999999999999999999853
Q gi|254780843|r  352 SLEDQ-ASG-GSGII-CTTISGGVIIPLGVGYLV---DIASLRDAMFVPAVCYIIIAIYGIYCC  409 (420)
Q Consensus       352 ~~~~~-~~~-~~~~~-~~~~~g~~i~p~i~G~l~---d~~g~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
T Consensus        82 ~~~~~~~~~~a~g~~~~~~~~g~~lgP~~G~~~~~~~~~~~wr~~F~~~~~~~~~~~~~~~~~~  145 (148)
T TIGR00880        82 IYPPEEERSVALGLMSAGIALGPILGPPLGGVLANVKQALGWRAPFLILAALALAAFILLAFLL  145 (148)
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             4264047889999999999999999999989998755401765899999999999999998860