HHsearch alignment for GI: 254780843 and conserved domain: TIGR00889

>TIGR00889 2A0110 nucleoside transporter; InterPro: IPR004740 This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease (NupG) and xanthosine permease (XapB) from Escherichia coli.; GO: 0005337 nucleoside transmembrane transporter activity, 0015858 nucleoside transport, 0016021 integral to membrane.

Probab=98.55  E-value=7.4e-07  Score=50.67  Aligned_cols=159  Identities=14%  Similarity=0.221  Sum_probs=115.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf             1200599999999999999998738998999999809998--------99999999999999999999999998526289
Q gi|254780843|r    6 ARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTY--------LQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIK   77 (420)
Q Consensus         6 ~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~--------~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~   77 (420)
T Consensus       212 fknkr~~iFF~fs--~llga~L~i~n~FgN~fL~~~~~~P~FA~SF~vk~asi~ms~sQ~sE~~FiLtiPFFlkRfGIK~  289 (435)
T TIGR00889       212 FKNKRMAIFFLFS--MLLGAELQITNIFGNGFLHEFGKDPEFADSFVVKNASILMSLSQFSEILFILTIPFFLKRFGIKK  289 (435)
T ss_pred             HCCCCHHHHHHHH--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             5088546789999--99756888765304521011257886201123213288774889999999985225531344789


Q ss_pred             HHHHHHHHHHHHHHCC--HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHH-HCCCHHHHH
Q ss_conf             9999999764321000--0001320246789998877756788876531000012303578877664431-100003454
Q gi|254780843|r   78 GICTGLLIMSLGCILF--TATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQF-FNSLGTAIF  154 (420)
Q Consensus        78 ~l~~~~~~~~i~~ll~--~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g  154 (420)
T Consensus       290 V~l~s~Vaw~lRfgfF~YGsdp~~fg~~LL~Ls~ivyG~afDFfnisgsvfVek~v~~~iRasAQGl~~~~~~GfG~~lG  369 (435)
T TIGR00889       290 VLLLSLVAWALRFGFFAYGSDPEYFGYVLLLLSMIVYGCAFDFFNISGSVFVEKEVPVAIRASAQGLFLLMVNGFGSLLG  369 (435)
T ss_pred             HHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999876503078985489999999999986544103445789960027866667888999999701777775


Q ss_pred             HHHHHHHHHCCC
Q ss_conf             788888641234
Q gi|254780843|r  155 PYIGSVLMLGNL  166 (420)
Q Consensus       155 ~~~~~~l~~~~~  166 (420)
T Consensus       370 ~~lsG~~ve~~~  381 (435)
T TIGR00889       370 YILSGVVVEKYF  381 (435)
T ss_pred             HHHHHHHHHHHH
T ss_conf             445636664331