HHsearch alignment for GI: 254780843 and conserved domain: TIGR00891
>TIGR00891 2A0112 MFS transporter, sialate:H+ symporter (SHS) family; InterPro: IPR004742 The sugar transporters belong to a family of membrane proteins responsible for the transport of various sugars in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . Proteins transporting sugars and other substrates are related in this broader family. Sialic acid transporters belong to this group.; GO: 0015144 carbohydrate transmembrane transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.97 E-value=5e-30 Score=166.82 Aligned_cols=376 Identities=10% Similarity=-0.003 Sum_probs=265.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 53112005999999999999999987389989999998099989999999999999999999999999852628999999
Q gi|254780843|r 3 DTIARNIQCTKIYIFILFFLFGGITSLNSILVPKLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKGICTG 82 (420)
Q Consensus 3 ~~~~k~~~~~~i~i~~~ff~~g~~~~~~~~~~p~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~ 82 (420)
T Consensus 4 r~lt~~qwnaF~a~~lgwl~dafdfflv~lv~a~~a~~f~~t~~d~a~l~~a~l~~R~~Gal~fGlw~Dr~gRr~p~~t~ 83 (453)
T TIGR00891 4 RKLTRDQWNAFFAAYLGWLLDAFDFFLVALVLAEVAEEFDRTTKDVAFLLSAVLIVRSVGALLFGLWADRVGRRLPLVTS 83 (453)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 66567888999999999998545300123565010420068447899999999999758899998874225560378888
Q ss_pred HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99764321000000132024678999887775678887653100001230357887766443110000345478888864
Q gi|254780843|r 83 LLIMSLGCILFTATIEITTFKVFLIALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLM 162 (420)
Q Consensus 83 ~~~~~i~~ll~~~a~~~~~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 162 (420)
T Consensus 84 ~~lfs~~~l~c~fa---p~y~~~~i~Rl~~GigMgG~yG~~aa~~iE~~P~~~R~~~SGll~sgya~G~~~A~~~y~~v~ 160 (453)
T TIGR00891 84 VVLFSVATLLCAFA---PTYEKLLIVRLVIGIGMGGEYGLAAALAIEKVPAKLRSVLSGLLISGYAVGYVLAAVVYRVVV 160 (453)
T ss_pred HHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999750557---607889999999964410046679989998403876223325888899999999999999888
Q ss_pred HCCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC--------------
Q ss_conf 1234-2046776555557789888642001121100134555543210123101233210001111--------------
Q gi|254780843|r 163 LGNL-ASPNTSMLADTMKDYQTDTARVISQMYLVLAIILFLATWLCWMQRNSFADHKRNHISFLKT-------------- 227 (420)
Q Consensus 163 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 227 (420)
T Consensus 161 ~~~g~~Wr~LF~~sI-~p~i~~l~~R~~~p----E~e~w~~~~~~~~l~~t~~~~~~gge~~~~~~~~~~~~~talWfCf 235 (453)
T TIGR00891 161 NFLGLSWRILFFLSI-LPAILALFLRLRVP----EAEVWKKALKAKKLVKTRVDKVLGGEALVKAIVKTKAVATALWFCF 235 (453)
T ss_pred HHHCCHHHHHHHHHH-HHHHHHHHHHCCCC----CCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 762325899999999-99999999850386----2067999984036416689986278602799999999999999988
Q ss_pred ---------------------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCHHHHHHHH
Q ss_conf ---------------------------2221111111000111000135567789999875420--12221012468889
Q gi|254780843|r 228 ---------------------------LDILANPRFTMGAVCIFLYVGAEVAIGSIMANYLMRH--DTLHLDGISAGQHT 278 (420)
Q Consensus 228 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 278 (420)
T Consensus 236 aGnlqnaaivavlGllCaaifisfM~~~~~KrW~~fvyLvvl~~~~n~~sh~~QdllPT~L~a~tdhGlgls~~tv~~iv 315 (453)
T TIGR00891 236 AGNLQNAAIVAVLGLLCAAIFISFMKRSVQKRWLLFVYLVVLLVAANYLSHAIQDLLPTYLKADTDHGLGLSKDTVAVIV 315 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEE
T ss_conf 41013689999999999999999987740312478999999999988752104553220121354201345731416877
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHH-HHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9998764310011111100000000012455554-5676899622--336899999999999999999999999963015
Q gi|254780843|r 279 AIYWGSAMIGRFIGTWILSRFSAEKTLCAFATTA-CSLVILSSYT--TGFISGWSLIAVGLFNSIMFPTIFSLASASLED 355 (420)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 355 (420)
T Consensus 316 v~~niGAi~Gg~~fG~l~~~~grR~~~v~~~~~g~l~i~P~Fa~~G~~~a~Lglg~F~~q~~vqG~wGilP~hl~e~~p~ 395 (453)
T TIGR00891 316 VVSNIGAIVGGLVFGTLSEVLGRRLALVIALLLGQLLIVPVFALSGAEAAVLGLGLFLLQVLVQGVWGILPKHLAELAPA 395 (453)
T ss_pred EEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCH
T ss_conf 87262468775530215566668999999998601233025652141799999999999998415765579886045903
Q ss_pred HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 656999-99-99999999999999999999612
Q gi|254780843|r 356 QASGGS-GI-ICTTISGGVIIPLGVGYLVDIAS 386 (420)
Q Consensus 356 ~~~~~~-~~-~~~~~~g~~i~p~i~G~l~d~~g 386 (420)
T Consensus 396 d~Ra~~~G~tYqlGnL~~A~a~~I~~~lA~r~~ 428 (453)
T TIGR00891 396 DARAVVAGLTYQLGNLAAALASIIEERLAERYD 428 (453)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 324644363145777898762378887563157