HHsearch alignment for GI: 254780843 and conserved domain: TIGR00897

>TIGR00897 2A0118 polyol permease; InterPro: IPR004748 Proteins in this entry are mostly known or predicted polyol transporters. The best characterised of these proteins are DalT and RbtT from Klebsiella pneumoniae, which tranpsort D-arabinatol and ribotol respectively. Like other members of the Major Facilitator Superfamily (MFS), DalT and RbtT appear to be secondary transporters capable only of transporting solutes in response to chemiosmotic ion gradients . They contain a total of twelve predicted transmembrane helices; six in the N-terminal portion of the protein, and six in the C-terminal portion. Residues defining substrate specificity lie in the N-terminal region of these proteins.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.84  E-value=2.9e-08  Score=57.74  Aligned_cols=138  Identities=13%  Similarity=0.124  Sum_probs=107.6

Q ss_pred             HHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHHCCHHCCCC--CHHHHHH
Q ss_conf             99899-9999809998999999999999999999999999985262899-999999764321000000132--0246789
Q gi|254780843|r   31 SILVP-KLQNSFSLTYLQAMLVEAIFFSCYFFFSIPAGMFIQRYGYIKG-ICTGLLIMSLGCILFTATIEI--TTFKVFL  106 (420)
Q Consensus        31 ~~~~p-~l~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~Grr~~-l~~~~~~~~i~~ll~~~a~~~--~~~~~~~  106 (420)
T Consensus       250 avflPmm~~a~~G~StseWLQiWg~~Ff~nIvfN~ifGivGdKlGW~~~V~WFGgvG~giftlalYY~P~~~Ghs~av~~  329 (411)
T TIGR00897       250 AVFLPMMFLAELGFSTSEWLQIWGTLFFTNIVFNVIFGIVGDKLGWKNTVIWFGGVGCGIFTLALYYIPQFIGHSFAVVL  329 (411)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             67635899976387402589999999999999999997541446873166763764589999999865665225899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
Q ss_conf             9988777567888765310000123035788776644311000034547888886412342046
Q gi|254780843|r  107 IALCILAIGVVIIQVALNPFISLLGDPNTAVSRLTFAQFFNSLGTAIFPYIGSVLMLGNLASPN  170 (420)
Q Consensus       107 ~~~~i~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~  170 (420)
T Consensus       330 iia~~~G~~lAgyVPl~-A-~~Ptlapk~KGAA~SVlNL~aGlsaF~aPaia~lfig~~ga~GV  391 (411)
T TIGR00897       330 IIAIIYGILLAGYVPLA-A-VLPTLAPKDKGAAMSVLNLSAGLSAFVAPAIAVLFIGLLGAIGV  391 (411)
T ss_pred             HHHHHHHHHHHHHHHHH-H-HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf             99999999998663488-7-42234899873156488888628878889999999850020279