HHsearch alignment for GI: 254780843 and conserved domain: pfam02487
>pfam02487 CLN3 CLN3 protein. This is a family of proteins from the CLN3 gene. A missense mutation of glutamic acid (E) to lysine (K) at position 295 in the human protein has been implicated in Juvenile neuronal ceroid lipofuscinosis (Batten disease).
Probab=95.87 E-value=0.03 Score=27.59 Aligned_cols=33 Identities=9% Similarity=0.093 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999996301565699
Q gi|254780843|r 328 GWSLIAVGLFNSIMFPTIFSLASASLEDQASGG 360 (420)
Q Consensus 328 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (420)
T Consensus 346 f~lif~eGLlGGa~YVNtF~~I~~~v~~~~rEF 378 (409)
T pfam02487 346 FLLILFEGLLGGASYVNTFHNIHKEVDPDVREF 378 (409)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHEEE
T ss_conf 999999874352677748898750298767130