HHsearch alignment for GI: 254780845 and conserved domain: PRK08326
>PRK08326 ribonucleotide-diphosphate reductase subunit beta; Validated.
Probab=100.00 E-value=0 Score=369.55 Aligned_cols=293 Identities=22% Similarity=0.311 Sum_probs=240.9
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 45788133748688998000178616799999999994579870367479899852026899899999999999998643
Q gi|254780845|r 14 EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93 (352)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D 93 (352)
T Consensus 6 ~~~~~~~~~~~~~~gl~w~~-~p------~~Ly~~~~~~FW~PeeId~SqD~~Dw~~---Lt~~ER~~~~~i~s~f~age 75 (318)
T PRK08326 6 EGMVRHRSFSLTAGGLNWNS-FP------MKLFAKGNRKFWNPADIDFSRDRADWEK---LSDDERDYATRLCSQFIAGE 75 (318)
T ss_pred CCCEEECCCCCCCCCCCCCC-HH------HHHHHHHHHCCCCHHHCCCCCCHHHHHH---CCHHHHHHHHHHHHHHHHHH
T ss_conf 65533125420247758550-46------8999986306888775787330898876---89999999999999998607
Q ss_pred HHHHHHHHHHCCHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 33345566640133057---799999999999999778999999997146469999999720018987788999997401
Q gi|254780845|r 94 SLVANNIVLAIYRHLSN---PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLS 170 (352)
Q Consensus 94 ~~v~~~~~~~i~~~~~~---~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~e~f~~~~~~~~i~~k~~~~~~~~~~~~ 170 (352)
T Consensus 76 ~~Vt~nl~p-~~~~~~~~~~~e~~l~Lt~qafeEAvHtqsys~~ldtv~~~~d-l~~~~~d~p~~~~~------f~e~l~ 147 (318)
T PRK08326 76 EAVTLDIQP-LMAAMRAEGRLEDEMYLTQFAFEEAKHTEAFRRWLDAVGVTED-LHVYTTDLPSYRQI------FYEELP 147 (318)
T ss_pred HHHHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHH------HHHHHH
T ss_conf 899976377-8998861584346899999999999999999999999568577-89987513688999------999999
Q ss_pred CCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 21010267774014999999997400014441147889989-97598012899999998566666999999999765537
Q gi|254780845|r 171 SPSFTTGTKDADQEFLQDLFVFYVVFEGMWFYTGFAQILSL-GRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIEN 249 (352)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~l-~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~ 249 (352)
T Consensus 148 ~~l~~l~~dpsp~~~~~A~v~yn~ilEGilfySGf~~~~~~l~~rg~lPG~a~~Ir~I~RDE~rHi~~g~~~~~rlv~e~ 227 (318)
T PRK08326 148 AALNALDADPSPEAQVRASVTYNHVVEGILAETGYYAWHKICVRRGILPGLQEGVRRIGDDESRHIAFGTYTCRRLVAAD 227 (318)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99998761999799999999999999999999999999999987688987899999986159999999999999998608
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC---CCCCCCCC--CCCHHHHH
Q ss_conf 54220678999999999999876886887518884799989999999999999999788---79889998--88325789
Q gi|254780845|r 250 PHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIG---LEPLFKYT--ENPFPWMS 324 (352)
Q Consensus 250 p~l~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG---~~~~f~~~--~nP~~W~~ 324 (352)
T Consensus 228 ~~~~-~~~~e~~~el~~~a~~~-~~~~~~~~~~~~~~l~~~~~~~ya~~~~~~Rl~~i~~ar~~~~~~~~~~~~~~~~~~ 305 (318)
T PRK08326 228 DSNW-DVFEERMNELIPLALGL-IDEGFALYDVIPFGLSKDEFMQYAADKGQRRLGTISRARGRPLAEIDLDYSPLQLED 305 (318)
T ss_pred HHHH-HHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHH
T ss_conf 8889-99999999999999877-524410366688899989999999999988899999741997003057789899998
Q ss_pred HH
Q ss_conf 97
Q gi|254780845|r 325 EV 326 (352)
Q Consensus 325 ~~ 326 (352)
T Consensus 306 ~~ 307 (318)
T PRK08326 306 TF 307 (318)
T ss_pred HH
T ss_conf 86