HHsearch alignment for GI: 254780845 and conserved domain: PRK13966

>PRK13966 nrdF2 ribonucleotide-diphosphate reductase subunit beta; Provisional.
Probab=100.00  E-value=0  Score=562.80  Aligned_cols=296  Identities=22%  Similarity=0.342  Sum_probs=273.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
Q ss_conf             01786167999999999945798703674798998520268998999999999999986433334556664013305779
Q gi|254780845|r   33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE  112 (352)
Q Consensus        33 ~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E  112 (352)
T Consensus        15 Nwn~~~~~~~~~~y~~~~~nfW~PeEI~l~~D~~dw~~---Lt~~Ek~~~~~iL~~lt~lDs~q~~~~~~~~~~~~~~pE   91 (324)
T PRK13966         15 NWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGT---LTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIPDALTPH   91 (324)
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCEECCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH
T ss_conf             78886568999999999968788710342412999976---999999999999999999999997652998988748899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
Q ss_conf             999999999999977899999999714646--999999972001898778899999740121010267774014999999
Q gi|254780845|r  113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLF  190 (352)
Q Consensus       113 ~~~~l~~q~~~E~iH~~sYs~il~~l~~~~--~e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (352)
T Consensus        92 ~~~~l~~~a~~E~IHs~SYs~i~~tl~~~~e~~~~f~~~~~~~~l~~k~~~i~~~~~~-------------d~~-~~~~-  156 (324)
T PRK13966         92 EEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDDAFRWSEENRNLQRKAEIVLQYYRG-------------DEP-LKRK-  156 (324)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC-------------CHH-HHHH-
T ss_conf             9999999999999999999999998089251899999985089999999999999618-------------789-9999-


Q ss_pred             HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99740001444114788998997598012899999998566666999999999765537542206789999999999998
Q gi|254780845|r  191 VFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL  270 (352)
Q Consensus       191 ~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave  270 (352)
T Consensus       157 va~~~lEg~~FysgFa~~l~l~~~~kM~G~~~ii~~I~RDEs~H~~~~~~l~~~~~~~~~~~~~~e~~~~i~~~~~~~v~  236 (324)
T PRK13966        157 VASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYD  236 (324)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999985699867899999999837888879999999988854877689999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC---CCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             76886887518884799989999999999999999788798899988---832578997178867555766711221058
Q gi|254780845|r  271 LEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQGA  347 (352)
Q Consensus       271 ~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~---nP~~W~~~~~~~~~~tnFFe~~~t~Y~k~~  347 (352)
T Consensus       237 ~E~~~~~~l~~~--~GL~-~dv~~Yi~Y~ANrrL~~LGl~~~fp~~~~~~nP~~~~~~~~~~~~~~nFFE~r~t~Y~~g~  313 (324)
T PRK13966        237 NEVEYTQDLYDE--VGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYVIGK  313 (324)
T ss_pred             HHHHHHHHHHCC--CCCH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCC
T ss_conf             999999987523--7948-9999999999999999788998899745788946699862256753786788700214165


Q ss_pred             CC
Q ss_conf             67
Q gi|254780845|r  348 EL  349 (352)
Q Consensus       348 ~~  349 (352)
T Consensus       314 ~~  315 (324)
T PRK13966        314 AV  315 (324)
T ss_pred             CC
T ss_conf             66