HHsearch alignment for GI: 254780845 and conserved domain: PRK13966
>PRK13966 nrdF2 ribonucleotide-diphosphate reductase subunit beta; Provisional.
Probab=100.00 E-value=0 Score=562.80 Aligned_cols=296 Identities=22% Similarity=0.342 Sum_probs=273.2
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
Q ss_conf 01786167999999999945798703674798998520268998999999999999986433334556664013305779
Q gi|254780845|r 33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112 (352)
Q Consensus 33 ~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E 112 (352)
T Consensus 15 Nwn~~~~~~~~~~y~~~~~nfW~PeEI~l~~D~~dw~~---Lt~~Ek~~~~~iL~~lt~lDs~q~~~~~~~~~~~~~~pE 91 (324)
T PRK13966 15 NWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGT---LTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIPDALTPH 91 (324)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCEECCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH
T ss_conf 78886568999999999968788710342412999976---999999999999999999999997652998988748899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
Q ss_conf 999999999999977899999999714646--999999972001898778899999740121010267774014999999
Q gi|254780845|r 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLF 190 (352)
Q Consensus 113 ~~~~l~~q~~~E~iH~~sYs~il~~l~~~~--~e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (352)
T Consensus 92 ~~~~l~~~a~~E~IHs~SYs~i~~tl~~~~e~~~~f~~~~~~~~l~~k~~~i~~~~~~-------------d~~-~~~~- 156 (324)
T PRK13966 92 EEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDDAFRWSEENRNLQRKAEIVLQYYRG-------------DEP-LKRK- 156 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC-------------CHH-HHHH-
T ss_conf 9999999999999999999999998089251899999985089999999999999618-------------789-9999-
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99740001444114788998997598012899999998566666999999999765537542206789999999999998
Q gi|254780845|r 191 VFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL 270 (352)
Q Consensus 191 ~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave 270 (352)
T Consensus 157 va~~~lEg~~FysgFa~~l~l~~~~kM~G~~~ii~~I~RDEs~H~~~~~~l~~~~~~~~~~~~~~e~~~~i~~~~~~~v~ 236 (324)
T PRK13966 157 VASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYD 236 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999985699867899999999837888879999999988854877689999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC---CCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76886887518884799989999999999999999788798899988---832578997178867555766711221058
Q gi|254780845|r 271 LEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQGA 347 (352)
Q Consensus 271 ~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~---nP~~W~~~~~~~~~~tnFFe~~~t~Y~k~~ 347 (352)
T Consensus 237 ~E~~~~~~l~~~--~GL~-~dv~~Yi~Y~ANrrL~~LGl~~~fp~~~~~~nP~~~~~~~~~~~~~~nFFE~r~t~Y~~g~ 313 (324)
T PRK13966 237 NEVEYTQDLYDE--VGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYVIGK 313 (324)
T ss_pred HHHHHHHHHHCC--CCCH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCC
T ss_conf 999999987523--7948-9999999999999999788998899745788946699862256753786788700214165
Q ss_pred CC
Q ss_conf 67
Q gi|254780845|r 348 EL 349 (352)
Q Consensus 348 ~~ 349 (352)
T Consensus 314 ~~ 315 (324)
T PRK13966 314 AV 315 (324)
T ss_pred CC
T ss_conf 66