HHSEARCH alignment of GI: 254780845 and SCOP domain: d1r2fa_

Alignment
>d1r2fa_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Salmonella typhimurium [TaxId: 90371]}
Probab=100.00  E-value=0  Score=472.10  Aligned_cols=273  Identities=19%  Similarity=0.270  Sum_probs=246.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
Q ss_conf             01786167999999999945798703674798998520268998999999999999986433334556664013305779
Q gi|254780845|r   33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE  112 (352)
Q Consensus        33 ~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E  112 (352)
                      +++-++|+|++++|+|++++||+|+||||++|++||++   ||+.||++++++|++|+++|++|++++...+++.++.||
T Consensus         5 nwn~~~d~~~~~~y~k~~~~fW~peEi~l~~D~~dw~~---Lt~~Er~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~~~E   81 (283)
T d1r2fa_           5 NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPH   81 (283)
T ss_dssp             CTTSCSCHHHHHHHHHHHHTCCCGGGSCGGGGHHHHHT---SCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCSSHH
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH
T ss_conf             67888858899999999967999735282744998852---999999999999999999999997533441323015689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
Q ss_conf             999999999999977899999999714646--999999972001898778899999740121010267774014999999
Q gi|254780845|r  113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLF  190 (352)
Q Consensus       113 ~~~~l~~q~~~E~iH~~sYs~il~~l~~~~--~e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (352)
                      +++++++|+++|+||+++||+++++++.++  .++|+++.+.|.+++|++|+.+++..             ++.+. ++ 
T Consensus        82 ~~~~~~~q~~~E~iH~~~Ys~il~~l~~~~e~~~~~~~~~~~~~l~~k~~~~~~~~~~-------------~~~l~-~~-  146 (283)
T d1r2fa_          82 EEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVS-------------DEPLK-KK-  146 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHS-------------SCHHH-HH-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CHHHH-HH-
T ss_conf             9999999999998889999999998742444789999986168999988999888501-------------20899-99-


Q ss_pred             HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99740001444114788998997598012899999998566666999999999765537542206789999999999998
Q gi|254780845|r  191 VFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL  270 (352)
Q Consensus       191 ~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave  270 (352)
                      ++++++||++|||||+++++|+++|+|+|++++|++|+|||++|+.|++.++++++.|.|+.++++++++++++++++|+
T Consensus       147 i~~~~lEGi~F~s~F~~~~~~~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~e~~~~~~~~~~~~v~~~~~e~v~  226 (283)
T d1r2fa_         147 IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYD  226 (283)
T ss_dssp             HHHHHHHHTTTHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999866999999987575034999999999988753568999999998733588886689999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHH
Q ss_conf             76886887518884799989999999999999999788798899988-832578997
Q gi|254780845|r  271 LEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEV  326 (352)
Q Consensus       271 ~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~-nP~~W~~~~  326 (352)
                      +|++|++++++++..   .+++++||+|+||+||++||++|+|++.. ++-||+-..
T Consensus       227 ~E~~~~~~~~~~~~~---~~~~~~yiky~an~~L~~lG~~~~f~~~~~~~NP~~~~~  280 (283)
T d1r2fa_         227 NEIRYTEALYAETGW---VNDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAA  280 (283)
T ss_dssp             HHHHHHHHHTTTTSC---HHHHHHHHHHHHHHHHHHTTCCCCSCTTTSCCCHHHHHH
T ss_pred             HHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCC
T ss_conf             999999997116787---999999999999999997889989998778999135415


SCOP domain information

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Salmonella typhimurium [TaxId: 90371]