HHSEARCH alignment of GI: 254780845 and SCOP domain: d2oc5a1

Alignment
>d2oc5a1 a.25.1.6 (A:20-241) Hypothetical protein PMT1231 {Prochlorococcus marinus [TaxId: 1219]}
Probab=98.03  E-value=0.00055  Score=43.37  Aligned_cols=202  Identities=17%  Similarity=0.130  Sum_probs=118.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             99899999999999998643333455666401330577999999999999997789999999971464699999997200
Q gi|254780845|r   74 LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP  153 (352)
Q Consensus        74 Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~e~f~~~~~~~  153 (352)
                      -|+.-|+.|.++=+.-.-++...-+|+. .+...+  |+-+-=+.+.+-||+.|.+.|.-+=++|+..++-         
T Consensus         7 ~se~YkdAYSRINaIVIEGEqeA~~Nyi-~la~ll--P~~~dEL~rLakME~rH~kgF~aCGrNL~V~~Dm---------   74 (222)
T d2oc5a1           7 TSDRYKDAYSRINAIVIEGEQEAHDNYI-AIGTLL--PDHVEELKRLAKMEMRHKKGFTACGKNLGVEADM---------   74 (222)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHC--GGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH---------
T ss_pred             CCHHHHHHHHHHHEEEEECHHHHHHHHH-HHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------
T ss_conf             4078899998740155735087888699-999878--2218999999999988876888872277588793---------


Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             189877889999974012101026777401499999999740001444114788998-9975980128999999985666
Q gi|254780845|r  154 SITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLFVFYVVFEGMWFYTGFAQILS-LGRANKMVGIAEQYQYIMRDES  232 (352)
Q Consensus       154 ~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~-l~~~g~m~g~~~~i~~I~RDE~  232 (352)
                            .|..++...+... +..  -...-..+..+++.++++|.      ||+--+ .--.=-=|=-.++-.-+.+||.
T Consensus        75 ------~fA~~fF~~Lh~n-Fq~--A~~egk~~tCLlIQaliIE~------FAIaAY~iYipVAD~FARkITegVVkDEY  139 (222)
T d2oc5a1          75 ------DFAREFFAPLRDN-FQT--ALGQGKTPTCLLIQALLIEA------FAISAYHTYIPVSDPFARKITEGVVKDEY  139 (222)
T ss_dssp             ------HHHHHHHHHHHHH-HHH--HHHTTCHHHHHHHHHTHHHH------HHHHHHHHHGGGSCHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHH-HHH--HHHCCCEEEHHHHHHHHHHH------HHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf             ------8999999999899-999--98659932149899999999------99998773110366777888776774477


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             669999999997655375422067899999999999987688688751888-479998999999999999999978879
Q gi|254780845|r  233 LHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE  310 (352)
Q Consensus       233 lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave~E~~~~~~~~~~~-~~Gl~~~~~~~yi~y~an~rL~~lG~~  310 (352)
                      .|..||..-++.-..        .+++++.+--++.+-+-..-.+.+-++. ++||..+.+.+=---.-...|.+||+.
T Consensus       140 ~HLN~Ge~WLk~~f~--------~~k~el~~AN~~nLPlv~~ML~qV~~Da~vL~Meke~lvedFmi~Y~eAL~~IGf~  210 (222)
T d2oc5a1         140 THLNYGEAWLKANLE--------SCREELLEANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLIAYQESLTEIGFN  210 (222)
T ss_dssp             HHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHH--------HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             760158999999999--------99999999888616399999999997899976889999999999999999975975


SCOP domain information

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: PMT1231-like
domain: Hypothetical protein PMT1231
species: Prochlorococcus marinus [TaxId: 1219]