HHsearch alignment for GI: 254780846 and conserved domain: COG0196
>COG0196 RibF FAD synthase [Coenzyme metabolism].
Probab=100.00 E-value=0 Score=655.56 Aligned_cols=302 Identities=41% Similarity=0.758 Sum_probs=285.9
Q ss_pred CEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHCCCCCCCCCCHHHHH
Q ss_conf 9422488521127610188499993156502899999999999502--79779998379868984788866200007899
Q gi|254780846|r 1 MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~--~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k 78 (324)
T Consensus 1 m~~~~~~---~~~~~~~~~~~l~IG~FDGvHlGHq~ll~~a~~~a~~~~~~~~VitF~p~P~~~~~~~~~~~~Lt~~~~k 77 (304)
T COG0196 1 MKIIRGT---HNIPEDLRGCVLTIGNFDGVHLGHQKLLAQALEAAEKRGLPVVVITFEPHPRELLKPDKPPTRLTPLREK 77 (304)
T ss_pred CCEEECC---CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCCCCCHHHH
T ss_conf 9368635---6787445785899974776156699999999999987289669999369978870877772003798999
Q ss_pred HHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHH
Q ss_conf 99885113100022564057752283026888621427802999834553033775560246775101264167615223
Q gi|254780846|r 79 EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR 158 (324)
Q Consensus 79 ~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~ 158 (324)
T Consensus 78 ~~~l~~~gvd~~~v~~F~~~fa~ls~~~Fv~-~lv~~l~~k~ivvG~DF~FGk~~~g~~~~L~~~~~~-gf~v~~v~~~~ 155 (304)
T COG0196 78 IRLLAGYGVDALVVLDFDLEFANLSAEEFVE-LLVEKLNVKHIVVGFDFRFGKGRQGNAELLRELGQK-GFEVTIVPKIN 155 (304)
T ss_pred HHHHHHCCCCEEEEEECCHHHHHCCHHHHHH-HHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCC-CCEEEEECCEE
T ss_conf 9999866996899996786576399789999-998445872899933641688888989999973557-85399945472
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEEEEHHCCCCCCHHHHEEEEEEEECCCC
Q ss_conf 02333023036899987258999998500000000012210020110111112110000222310110002476305656
Q gi|254780846|r 159 NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238 (324)
Q Consensus 159 ~~~~~~ISSt~IR~~l~~Gdi~~an~lLGr~y~i~G~Vv~G~~~Gr~lGfPTaNi~~~~~~~p~~GVY~~~v~~~~~~~~ 238 (324)
T Consensus 156 ~-~~~~iSSt~IR~~L~~gdl~~A~~lLG~py~i~G~Vv~G~~~Gr~lGfPTaNi~~~~~~~~~~GVYav~v~~~~~~-~ 233 (304)
T COG0196 156 E-EGIRISSTAIRQALREGDLEEANKLLGRPYSIEGKVVHGQKLGRTLGFPTANIYLKDNVLPAFGVYAVRVKLDGGV-Y 233 (304)
T ss_pred C-CCCEECHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC-C
T ss_conf 2-7957825999998764898899986199858998997253035604877316566665155770699999978864-2
Q ss_pred CHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 211057899726779714999994067855189889999460000887468989999999997999999987
Q gi|254780846|r 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310 (324)
Q Consensus 239 ~~v~niG~~PT~~~~~~~~iE~hildf~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~ 310 (324)
T Consensus 234 ~gv~~vG~rpt~~~~-~~~lEvhi~Df~~dlYG~~i~v~~~~~iR~e~kF~s~d~L~~qi~~D~~~Ar~~~~ 304 (304)
T COG0196 234 PGVANVGYRPTVDGS-ERSLEVHILDFNGDLYGERVKVRFLKFIRDEKKFDSLDELKEQIEKDIERARKLLA 304 (304)
T ss_pred CCEEEECCCCCCCCC-EEEEEEEEECCCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 116885216501687-06899997325642367369999864225566788899999999999999999749