HHsearch alignment for GI: 254780846 and conserved domain: COG0615
>COG0615 TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism].
Probab=98.58 E-value=6.5e-07 Score=65.78 Aligned_cols=133 Identities=21% Similarity=0.248 Sum_probs=87.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCCCHHHH
Q ss_conf 999931565028999999999995027977999837986898478886620000789999885113-1000225640577
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLET 99 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~G-id~vi~~~F~~~~ 99 (324)
T Consensus 4 V~~~GtFDilH~GHi~~L~~Ak~lGd~l-iVv~a----~de~~~~~~k~~pi~~~~qR~evl~s~ryVD~vi~~------ 72 (140)
T COG0615 4 VWADGTFDILHPGHIEFLRQAKKLGDEL-IVVVA----RDETVIKRKKRKPIMPEEQRAEVLESLRYVDEVILG------ 72 (140)
T ss_pred EEEEEEEEEECHHHHHHHHHHHHHCCEE-EEEEE----CCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHEEEEC------
T ss_conf 9980389985665999999999858969-99996----457888850899988889999999727625404208------
Q ss_pred HHCCCHHH-HHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHH
Q ss_conf 52283026-88862142780299983455303377556024677510126416761522302333023036899987
Q gi|254780846|r 100 ANYSAEQF-IQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175 (324)
Q Consensus 100 a~ls~e~F-i~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~ 175 (324)
T Consensus 73 ---~p~~~~~~~-i-~~~k~Div~lG~D~~------~d~~~l~~~~~k~G~~~~v~R~~g~~~~~~~st~~i~~~i~ 138 (140)
T COG0615 73 ---APWDIKFED-I-EEYKPDIVVLGDDQK------FDEDDLKYELVKRGLFVEVKRTEGVSTCELISTSDIIKRIL 138 (140)
T ss_pred ---CCCCCCHHH-H-HHHCCCEEEECCCCC------CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf ---965467689-9-995999999779876------77689999999769825898415745676456488999986