HHsearch alignment for GI: 254780846 and conserved domain: COG1056
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism].
Probab=96.64 E-value=0.012 Score=38.04 Aligned_cols=160 Identities=15% Similarity=0.179 Sum_probs=86.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC--CCCCCCHHH
Q ss_conf 999931565028999999999995027977999837986898478886620000789999885113100--022564057
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA--LIRYKFTLE 98 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~--vi~~~F~~~ 98 (324)
T Consensus 6 gv~~GRFqP~H~GHl~vi~~al~~vdeliI-~iGSa~~~~t~~nPfTagER~~mi~~---~L~~~~~~~r~~~~~v~d~~ 81 (172)
T COG1056 6 GVYFGRFQPLHTGHLYVIKRALSKVDELII-VIGSAQESHTLKNPFTAGERIPMIRD---RLREAGLDLRVYLRPVFDIE 81 (172)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCEEEE-EECCCCCCCCCCCCCCCCCHHHHHHH---HHHHCCCCCEEEEEECCCCC
T ss_conf 899865679647699999999975897999-97627645544699975400699999---99865877428999647620
Q ss_pred HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 75228302688862142780299983455303377556024677510126416761522302333023036899987258
Q gi|254780846|r 99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178 (324)
Q Consensus 99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd 178 (324)
T Consensus 82 ~n~i~v-~~v~~~~-p----~~~~~-----~~----~n-~~v~~lf~~~~~~~~~p-~~f-~~~e-~~~t~ir~~~~~~e 142 (172)
T COG1056 82 YNDIWV-AYVEDLV-P----PFDVV-----YT----WN-PWVARLFHEKGEKVYYP-PMF-PRWE-YSGTAIRRKMLGGE 142 (172)
T ss_pred CCHHHH-HHHHHCC-C----CCCCC-----CC----CC-HHHHHHHHHCCCEEECC-CCC-CCCC-CCCCHHHHHHHCCC
T ss_conf 111558-8886128-8----75536-----77----87-79999876617606358-851-3643-35616777763676
Q ss_pred HHHHHHHHHHCCHHHHHHHHCCCCCC
Q ss_conf 99999850000000001221002011
Q gi|254780846|r 179 VLNAAHLLGYRFTIESDVIHGEKIGR 204 (324)
Q Consensus 179 i~~an~lLGr~y~i~G~Vv~G~~~Gr 204 (324)
T Consensus 143 ~~-w~~~~~~~v~~~i~eI~g~~r~~ 167 (172)
T COG1056 143 DV-WEDLVPTFVAESITEIRGVPRLR 167 (172)
T ss_pred CC-HHHCCCCHHHHHHHHCCCCHHHH
T ss_conf 33-13336705767777558746778