HHsearch alignment for GI: 254780846 and conserved domain: COG2870

>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane].
Probab=97.50  E-value=0.00056  Score=46.72  Aligned_cols=130  Identities=16%  Similarity=0.255  Sum_probs=86.5

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCCCHHH
Q ss_conf             4999931565028999999999995027977999837986898478886620000789999885113-100022564057
Q gi|254780846|r   20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLE   98 (324)
Q Consensus        20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~G-id~vi~~~F~~~   98 (324)
T Consensus       334 vvfTNGcFDIlH~GHvsyL~~Ar~lgd~Livg-~NsDaSvkrL-KG~--~RPin~~~~Ra~vLa~L~~VD~vV--~F~--  405 (467)
T COG2870         334 VVFTNGCFDILHAGHVTYLAQARALGDRLIVG-VNSDASVKRL-KGE--SRPINSEEDRAAVLAALESVDLVV--IFD--  405 (467)
T ss_pred             EEEECCHHHHCCCCHHHHHHHHHHHCCEEEEE-ECCCHHHHHH-CCC--CCCCCCHHHHHHHHHHCCCCEEEE--EEC--
T ss_conf             88733403323453788999998638859999-5371244552-399--988882787899986315400899--827--


Q ss_pred             HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHH--HHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHH
Q ss_conf             7522830268886214278029998345530337755602467--75101264167615223023330230368999872
Q gi|254780846|r   99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ--KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK  176 (324)
Q Consensus        99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~--~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~  176 (324)
T Consensus       406 --EdTP~~LI~-----~~~PdilVKGgDy~--------~~~i~g~~~v~~~GG~v~~i~f~---~g--~STt~ii~ki~~  465 (467)
T COG2870         406 --EDTPEELIE-----AVKPDILVKGGDYK--------IEKIVGADIVEAYGGEVLLIPFE---EG--KSTTKIIEKIRA  465 (467)
T ss_pred             --CCCHHHHHH-----HHCCCEEECCCCCC--------HHHCCCHHHHHHCCCEEEEEECC---CC--CCHHHHHHHHHC
T ss_conf             --999899998-----73866587068887--------24403236655339759998644---68--738999999861


Q ss_pred             H
Q ss_conf             5
Q gi|254780846|r  177 G  177 (324)
Q Consensus       177 G  177 (324)
T Consensus       466 ~  466 (467)
T COG2870         466 K  466 (467)
T ss_pred             C
T ss_conf             5