HHsearch alignment for GI: 254780846 and conserved domain: TIGR00125
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain; InterPro: IPR004821 Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate.; GO: 0003824 catalytic activity, 0009058 biosynthetic process.
Probab=96.85 E-value=0.0022 Score=42.85 Aligned_cols=56 Identities=23% Similarity=0.376 Sum_probs=40.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511
Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85 (324)
Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~ 85 (324)
T Consensus 2 ~~~~G~fdp~h~GH~~~~~~~~~~~~--~~~~~~~~~----~~~~~~---~~~~~~~r~~~~~~~ 57 (63)
T TIGR00125 2 VIFGGTFDPLHLGHLDLLERAKELGD--LIVGVGSDE----FVNPLK---PVFSLEERLELLKAL 57 (63)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCC--EEEEECCCC----CCCCCC---CCCCHHHHHHHHHHH
T ss_conf 34067755555547999999997589--367533620----112457---767988999999876