HHsearch results for GI: 254780846 and protein with PDBid: 3op1_A
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=100.00 E-value=0 Score=676.44 Aligned_cols=299 Identities=28% Similarity=0.505 Sum_probs=266.8
Q ss_pred CEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHCCCCCCC--CCCHHH
Q ss_conf 9422488521127610188499993156502899999999999502--797799983798689847888662--000078
Q gi|254780846|r 1 MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF--TLSPPS 76 (324)
Q Consensus 1 Mki~~~~~~~~~~p~~~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~--~~~~~viTF~p~P~~~~~~~~~~~--~l~~~~ 76 (324)
|-+...+....++.. ..+||||||+|||||+|||+||+++++.|+ +.+++|+||+|||+.++.+..+.. .+++.+
T Consensus 4 ~~i~~~i~~~~~~~~-~~~sVvtIG~FDGvHlGHq~li~~~~~~a~~~~~~~~v~TF~phP~~~~~~~~~~~~~~l~~~~ 82 (308)
T 3op1_A 4 MIITIPIKNQKDIGT-PSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 82 (308)
T ss_dssp CCEEEECSSGGGCCC-CSCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHH
T ss_pred EEEEEECCCHHHCCC-CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCHHCCCCCHH
T ss_conf 799996458777589-9994999971721118999999999999998199789997679989983967852311258989
Q ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCH
Q ss_conf 99998851131000225640577522830268886214278029998345530337755602467751012641676152
Q gi|254780846|r 77 IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE 156 (324)
Q Consensus 77 ~k~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~ 156 (324)
+|.++|+++|+|++++++||+++++|||++|++. |.++++++.||||+|||||++|+|+.+ +++.+++++.++++
T Consensus 83 ek~~~l~~~Gid~~~~~~F~~~~a~ls~e~Fi~~-L~~~l~~~~ivvG~DF~FG~~r~g~~~----~~~~~~~~v~~v~~ 157 (308)
T 3op1_A 83 ERERKLKREGVEELYLLDFSSQFASLTAQEFFAT-YIKAMNAKIIVAGFDYTFGSDKKTAED----LKNYFDGEVIIVPP 157 (308)
T ss_dssp HHHHHHHHHTCCEEEEECCCHHHHTCCHHHHHHH-HHHHHTEEEEEEETTCCBTTTTBCSTT----HHHHCSSEEEEECC
T ss_pred HHHHHHHHCCCCEEEEEECCHHHHHCCHHHHHHH-HHHHCCCCEEEECCCCCCCCCHHHHHH----HHHHCCCEEEEECE
T ss_conf 9999998729978999846888850899999999-998558889998888577751034899----98755952898220
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEEEEHHC-CCCCCHHHHEEEEEEEEC
Q ss_conf 2302333023036899987258999998500000000012210020110111112110000-222310110002476305
Q gi|254780846|r 157 LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQ 235 (324)
Q Consensus 157 ~~~~~~~~ISSt~IR~~l~~Gdi~~an~lLGr~y~i~G~Vv~G~~~Gr~lGfPTaNi~~~~-~~~p~~GVY~~~v~~~~~ 235 (324)
+.. ++++||||+||++|++||++.||+||||||+++|+|+||+++||+||||||||.+++ .++|++||||++|.+ ++
T Consensus 158 ~~~-~~~~ISST~IR~~l~~G~i~~A~~lLGr~y~i~G~Vv~G~~~Gr~lGfPTaNl~~~~~~~~P~~GVYa~~v~~-~~ 235 (308)
T 3op1_A 158 VED-EKGKISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEI-QR 235 (308)
T ss_dssp CBC-SSCBCCHHHHHHHHHHTCHHHHHHHHSSCCEEEEEEEBCC------CCCCEEEEECSSBCCCCSEEEEEEEEE-TT
T ss_pred EEC-CCCCEEHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCCCCCHHHCCCCCCCEEEEEEEE-CC
T ss_conf 321-6861217999999984869899998487874257899677311120877623112131247887189999874-47
Q ss_pred CCCCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 6562110578997267797149999940678551898899994600008874689899999999979999999
Q gi|254780846|r 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308 (324)
Q Consensus 236 ~~~~~v~niG~~PT~~~~~~~~iE~hildf~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~ 308 (324)
.+|+||+|||.||||++ .+.++|+|||||++||||+.++|+|++|||+|+||+|+|+|++||++|++.||+|
T Consensus 236 ~~y~gv~niG~rPTf~~-~~~~lE~hildf~~dlYg~~i~V~f~~~iR~E~KF~s~eeL~~QI~~D~~~ar~y 307 (308)
T 3op1_A 236 QKYRAMASVGKNVTFDG-EEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTRNW 307 (308)
T ss_dssp EEEEEEEEECBTTTBC---CCEEEEEETTCCCCCTTCEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEECCCCCCCC-CCEEEEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 64156731036885379-7068999974689300698799991782168888199999999999999998666