HHSEARCH alignment of GI: 254780846 and SCOP domain: d1lw7a1

Alignment
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]}
Probab=99.25  E-value=9.6e-13  Score=100.76  Aligned_cols=151  Identities=13%  Similarity=0.058  Sum_probs=81.7

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC---CCCCC
Q ss_conf             884999931565028999999999995027977999837986898478886620000789999885113100---02256
Q gi|254780846|r   18 KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA---LIRYK   94 (324)
Q Consensus        18 ~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~---vi~~~   94 (324)
                      +..++..|+||.+|+||+.|++.+.+.++..-+++.+..+.|.... +......+.+.++|.++++.+..+.   ++...
T Consensus         2 kkigl~~G~FdP~H~GH~~l~~~a~~~~d~v~v~i~~~~~~~~~~~-~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~   80 (163)
T d1lw7a1           2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLF-YDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHH   80 (163)
T ss_dssp             CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHH-HHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEE
T ss_pred             CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             7699995247989999999999999968944999978998644456-555656789999999999983766784599973


Q ss_pred             CHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHH
Q ss_conf             40577522830268886214278029998345530337755602467751012641676152230233302303689998
Q gi|254780846|r   95 FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL  174 (324)
Q Consensus        95 F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l  174 (324)
                      +........+..+................+.+..|+.+..+    ...+.+.++.++..++.-  ..+..||||.||+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~ISST~IR~~~  154 (163)
T d1lw7a1          81 LVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD----KAPYEKYLGLEVSLVDPD--RTFFNVSATKIRTTP  154 (163)
T ss_dssp             EECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG----HHHHHHHTCCEEECCCSS--CCSSCCCHHHHHHCG
T ss_pred             CCHHCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCHHC----HHHHHHHCCCEEEEEECC--CCCCEECHHHHHHHH
T ss_conf             22111413748899999873134359973677899544212----188998649838999628--899847699999989


Q ss_pred             H
Q ss_conf             7
Q gi|254780846|r  175 T  175 (324)
Q Consensus       175 ~  175 (324)
                      .
T Consensus       155 ~  155 (163)
T d1lw7a1         155 F  155 (163)
T ss_dssp             G
T ss_pred             H
T ss_conf             9


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Transcriptional regulator NadR, NMN-adenylyltransferase domain
species: Haemophilus influenzae [TaxId: 727]