Query         gi|254780846|ref|YP_003065259.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 324
No_of_seqs    148 out of 2493
Neff          6.2 
Searched_HMMs 13730
Date          Wed Jun  1 10:23:45 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780846.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1mrza2 c.26.1.3 (A:2-158) FMN 100.0 3.5E-44       0  305.2  11.2  155   21-188     1-157 (157)
  2 d1n08a_ b.43.5.1 (A:) Riboflav 100.0 2.6E-43       0  299.6   7.5  130  188-319    14-149 (154)
  3 d1mrza1 b.43.5.1 (A:159-288) R 100.0 3.5E-43       0  298.7   6.0  124  189-312     1-126 (130)
  4 d1nb9a_ b.43.5.1 (A:) Riboflav 100.0 1.8E-42       0  294.2   6.8  130  189-319     4-139 (147)
  5 d1coza_ c.26.1.2 (A:) CTP:glyc  99.3 3.5E-12 2.5E-16   97.1   7.7  123   20-174     3-126 (126)
  6 d1lw7a1 c.26.1.3 (A:57-219) Tr  99.2 9.6E-13   7E-17  100.8   2.8  151   18-175     2-155 (163)
  7 d1f9aa_ c.26.1.3 (A:) Nicotina  99.2 1.9E-11 1.4E-15   92.3   6.6  135   21-178     3-137 (164)
  8 d1ej2a_ c.26.1.3 (A:) Nicotina  98.9 5.7E-10 4.1E-14   82.7   4.9  132   21-178     3-140 (167)
  9 d1v8fa_ c.26.1.4 (A:) Pantothe  98.8 9.1E-09 6.6E-13   74.9   7.3  168    1-185     1-198 (276)
 10 d1ihoa_ c.26.1.4 (A:) Pantothe  98.6   4E-08 2.9E-12   70.7   5.3  168    1-185     1-204 (282)
 11 d1jhda2 c.26.1.5 (A:174-396) A  98.6 5.2E-07 3.8E-11   63.5  10.9  165   19-190    20-218 (223)
 12 d2a84a1 c.26.1.4 (A:3-288) Pan  98.5 4.8E-08 3.5E-12   70.2   5.1  169    1-185     9-211 (286)
 13 d1kama_ c.26.1.3 (A:) Nicotina  98.5 8.4E-07 6.1E-11   62.1  11.0  147   21-178     5-167 (189)
 14 d1nuua_ c.26.1.3 (A:) Cytosoli  98.4 8.3E-07 6.1E-11   62.1   8.1   70   21-95      7-81  (233)
 15 d1kr2a_ c.26.1.3 (A:) Nicotina  98.3 2.3E-06 1.7E-10   59.2   8.5   69   22-95      8-81  (271)
 16 d1tfua_ c.26.1.3 (A:) Phosphop  98.2 2.9E-06 2.1E-10   58.6   7.0   37   20-59      3-39  (157)
 17 d1o6ba_ c.26.1.3 (A:) Phosphop  98.1 5.9E-06 4.3E-10   56.6   8.0  133   21-178     4-139 (163)
 18 d1od6a_ c.26.1.3 (A:) Phosphop  98.1 6.1E-06 4.5E-10   56.5   7.4   26   21-46      3-28  (160)
 19 d1k4ma_ c.26.1.3 (A:) Nicotina  98.0   2E-05 1.5E-09   53.1   9.4   34   24-57      9-43  (213)
 20 d1qjca_ c.26.1.3 (A:) Phosphop  97.9 3.2E-06 2.4E-10   58.3   3.8   27   20-46      2-28  (157)
 21 d1vlha_ c.26.1.3 (A:) Phosphop  97.8 2.2E-05 1.6E-09   52.8   6.4   25   21-45      3-27  (157)
 22 d1x6va2 c.26.1.5 (A:390-624) A  97.6  0.0004 2.9E-08   44.7  10.4  151   19-179    24-211 (235)
 23 d1g8fa2 c.26.1.5 (A:169-389) A  97.4 0.00054 3.9E-08   43.8   8.8  150   19-178    21-201 (221)
 24 d1v47a2 c.26.1.5 (A:136-349) A  96.9   0.017 1.2E-06   34.1  12.5  148   19-179    21-196 (214)
 25 d1h5ya_ c.1.2.1 (A:) Cyclase s  51.4       5 0.00036   18.1   2.7   81   72-159    85-177 (252)
 26 d2cbia2 c.1.8.10 (A:179-495) H  48.3     5.5  0.0004   17.8   2.5  229   36-314    59-305 (317)
 27 d1lwha2 c.1.8.1 (A:1-391) 4-al  48.2     2.5 0.00018   20.0   0.8   27   31-57     65-92  (391)
 28 d1p5dx1 c.84.1.1 (X:9-154) Pho  46.2     4.6 0.00033   18.3   1.9   68   81-152     5-72  (146)
 29 d1xi3a_ c.1.3.1 (A:) Thiamin p  44.2     9.1 0.00066   16.3   3.1   14  185-198   117-130 (206)
 30 d1ud2a2 c.1.8.1 (A:1-390) Bact  43.0     9.6  0.0007   16.2   3.5   25   72-96     22-46  (390)
 31 d1thfd_ c.1.2.1 (D:) Cyclase s  40.8      10 0.00076   16.0   3.7   22  106-128   111-132 (253)
 32 d1mxga2 c.1.8.1 (A:1-361) Bact  35.5      13 0.00091   15.4   3.6   20   31-50     82-101 (361)
 33 d2gtia2 d.294.1.2 (A:217-369)   34.3     2.9 0.00021   19.5  -0.6   61   94-157    20-80  (153)
 34 d3c8ya1 c.96.1.1 (A:210-574) F  30.2      15  0.0011   14.9   4.0   67   45-111    10-78  (365)
 35 d2tpsa_ c.1.3.1 (A:) Thiamin p  25.7      18  0.0013   14.4   4.6   15  181-196   130-144 (226)
 36 d1e43a2 c.1.8.1 (A:1-393) Bact  25.5      18  0.0013   14.4   3.5   19   31-49     74-92  (393)
 37 d2h85a2 d.294.1.2 (A:191-345)   24.7     3.9 0.00029   18.7  -1.4   49   92-143    16-64  (155)
 38 d1z2aa1 c.37.1.8 (A:8-171) Rab  24.5      19  0.0014   14.2   4.7   52  105-156    94-145 (164)
 39 d1ex2a_ c.51.4.2 (A:) Maf prot  24.3      11 0.00083   15.7   0.9   39   73-111     9-49  (185)
 40 d1ka9f_ c.1.2.1 (F:) Cyclase s  23.5      20  0.0015   14.1   2.2   18   79-96     36-53  (251)
 41 d1vhca_ c.1.10.1 (A:) Hypothet  22.2      21  0.0015   14.0   5.4   91   72-178    73-176 (212)
 42 d1ht6a2 c.1.8.1 (A:1-347) Plan  22.1      21  0.0016   13.9   3.0   17   32-48     65-81  (347)
 43 d2nqra3 c.57.1.2 (A:178-326) M  20.7      19  0.0014   14.2   1.5   32  129-160    21-52  (149)

No 1  
>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=100.00  E-value=3.5e-44  Score=305.22  Aligned_cols=155  Identities=28%  Similarity=0.468  Sum_probs=137.2

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf             99993156502899999999999502--7977999837986898478886620000789999885113100022564057
Q gi|254780846|r   21 VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLE   98 (324)
Q Consensus        21 vvtiG~FDGvH~GHq~Li~~~~~~a~--~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~   98 (324)
                      |+|||+|||+|+|||+||+++++.|+  +.+++|+||+|||..+ .++.+ ..+++.++|.++|+++|++  ++++|+ +
T Consensus         1 VvtiG~FDGvH~GHq~li~~~~~~a~~~~~~~~v~tf~~~p~~~-~~~~~-~~l~~~~~k~~~l~~~g~~--~~l~f~-~   75 (157)
T d1mrza2           1 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYF-LPDFP-GLLMTVESRVEMLSRYART--VVLDFF-R   75 (157)
T ss_dssp             CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGG-STTCC-CBSSCHHHHHHHHTTTSCE--EEECHH-H
T ss_pred             CEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHE-EECCC-CCCCCHHHHHHHHHCCCCE--EEEHHH-H
T ss_conf             98997261045899999999999999729985676427882314-74166-5444477765554303430--221256-6


Q ss_pred             HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf             75228302688862142780299983455303377556024677510126416761522302333023036899987258
Q gi|254780846|r   99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH  178 (324)
Q Consensus        99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd  178 (324)
                      +++|||++|++++|.   +++.||||+||+||++|+||+++|++    +|+++.+++++.. ++++||||+||++|.+||
T Consensus        76 ~~~ls~~~Fi~~~l~---~~~~ivvG~Df~FG~~r~G~~~~Lk~----~g~~v~~i~~~~~-~~~~ISST~IR~~l~~G~  147 (157)
T d1mrza2          76 IKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNASGNASFLRK----KGVEVYEIEDVVV-QGKRVSSSLIRNLVQEGR  147 (157)
T ss_dssp             HTTCCHHHHHHHHCT---TCCEEEEETTCCBSGGGCBCHHHHHH----TTCEEEEECCCEE-TTEECCHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHH---CCCEEEEECCCCCCCCCCCCHHHHCC----CEEEEEEECCEEE-CCCEECHHHHHHHHHCCC
T ss_conf             765406678998863---27389995574004444555455325----2058996145851-991895999999998499


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999985000
Q gi|254780846|r  179 VLNAAHLLGY  188 (324)
Q Consensus       179 i~~an~lLGr  188 (324)
                      |+.||+||||
T Consensus       148 i~~A~~lLGR  157 (157)
T d1mrza2         148 VEEIPAYLGR  157 (157)
T ss_dssp             TTTTHHHHSS
T ss_pred             HHHHHHHCCC
T ss_conf             9999985399


No 2  
>d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=2.6e-43  Score=299.55  Aligned_cols=130  Identities=24%  Similarity=0.339  Sum_probs=116.1

Q ss_pred             HCCHHHHHHHHCCCCC-CEEEEEEEEEEHHCC-C---CCCHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEE
Q ss_conf             0000000122100201-101111121100002-2---2310110002476305656211057899726779714999994
Q gi|254780846|r  188 YRFTIESDVIHGEKIG-RTLGFPTANMQLSPD-I---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI  262 (324)
Q Consensus       188 r~y~i~G~Vv~G~~~G-r~lGfPTaNi~~~~~-~---~p~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hi  262 (324)
                      +||+++|+|+||++|| |+||||||||.++.. .   .|+.|||++++.+ ++.+|+||+|||.||||++ ...++|+||
T Consensus        14 yPy~i~G~Vv~G~~~G~R~LGfPTANl~~~~~~~l~~~P~~GVYa~~v~i-~~~~y~~v~niG~rPTf~~-~~~~~Evhi   91 (154)
T d1n08a_          14 YPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMV-QKRVFPMVMSVGWNPYYKN-KLRSAEVHL   91 (154)
T ss_dssp             CCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTSCSEEEEEEEEE-TTEEEEEEEEEEECTTCSS-CCEEEEEEE
T ss_pred             CCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEE-ECEEEEEEEEECCCHHCCC-CCCEEEEEE
T ss_conf             88899999982895587655707862007513443235654327889864-0115777776536311044-563588898


Q ss_pred             ECCCC-CCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             06785-5189889999460000887468989999999997999999987448721134
Q gi|254780846|r  263 FDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD  319 (324)
Q Consensus       263 ldf~~-dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~~~~~~~d  319 (324)
                      |||++ ||||+.|+|+|++|||+|+||+|+|+|++||++|++.||++|+.......+.
T Consensus        92 ldf~~~dlYg~~i~V~~~~~iR~e~kF~s~e~L~~qI~~D~~~ar~~L~~~~~~~~~~  149 (154)
T d1n08a_          92 IERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKK  149 (154)
T ss_dssp             TTCCSCCCTTCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHTSHHHHGGGG
T ss_pred             ECCCCHHHCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
T ss_conf             3242221257899999814336984539999999999999999999986815776420


No 3  
>d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=100.00  E-value=3.5e-43  Score=298.70  Aligned_cols=124  Identities=37%  Similarity=0.638  Sum_probs=115.6

Q ss_pred             CCHHHHHHHHCCCCCCEEEEEEEEEEHHCC-CC-CCHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf             000000122100201101111121100002-22-3101100024763056562110578997267797149999940678
Q gi|254780846|r  189 RFTIESDVIHGEKIGRTLGFPTANMQLSPD-IL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFS  266 (324)
Q Consensus       189 ~y~i~G~Vv~G~~~Gr~lGfPTaNi~~~~~-~~-p~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hildf~  266 (324)
                      .|+|+|+|+||+++||+||||||||.+++. ++ |+.|||++++.+.++.+|+|++|||.||||+++...++|+||+||+
T Consensus         1 yy~i~G~V~~G~~~Gr~lGfPTANl~~~~~~~~~p~~GVY~~~v~~~~~~~~~~v~~iG~~PTf~~~~~~~~E~hi~df~   80 (130)
T d1mrza1           1 YFEIEGIVHKDREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNVKYEVYILDFE   80 (130)
T ss_dssp             CCEEEEEC-----------CCCEECBCCSSCBCCCCSEEEEEEEECGGGCEEEEEEEEEEC------CCEEEEEEETTCC
T ss_pred             CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEECCCC
T ss_conf             97999999808856523588778745566541034552668999986122231488998510316666504889971567


Q ss_pred             CCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             5518988999946000088746898999999999799999998744
Q gi|254780846|r  267 QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS  312 (324)
Q Consensus       267 ~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~  312 (324)
                      +||||+.++|+|++|||+|+||+|+|+|++||++|++.||++|++.
T Consensus        81 ~dlYg~~i~v~f~~~lR~e~kF~s~~eL~~qI~~Di~~ar~~l~~~  126 (130)
T d1mrza1          81 GDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMIDDI  126 (130)
T ss_dssp             SCCTTCEEEEEEEEEEECCCC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             5658979999988876798373999999999999999999999876


No 4  
>d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-42  Score=294.16  Aligned_cols=130  Identities=28%  Similarity=0.405  Sum_probs=117.3

Q ss_pred             CCHHHHHHHHCCCCC-CEEEEEEEEEEHHC-CCCC---CHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf             000000122100201-10111112110000-2223---101100024763056562110578997267797149999940
Q gi|254780846|r  189 RFTIESDVIHGEKIG-RTLGFPTANMQLSP-DILL---KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF  263 (324)
Q Consensus       189 ~y~i~G~Vv~G~~~G-r~lGfPTaNi~~~~-~~~p---~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hil  263 (324)
                      ||+++|.|+||+++| |+||||||||.++. ..+|   +.|||++++.+.++.+|+||+|||.||||++ ...++|+|+|
T Consensus         4 Py~i~G~Vv~G~~~G~r~LGfPTANl~~~~~~~lp~~~~~GVY~~~v~i~~~~~y~gi~niG~rPTf~~-~~~~~E~h~l   82 (147)
T d1nb9a_           4 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKN-TKKSMETHIM   82 (147)
T ss_dssp             SEEEEEECBCCSSSCGGGGTCCCEECCHHHHHTSCTTSCSEEEEEEEEETTCCCEEEEEEEEECTTSSS-CCEEEEEEES
T ss_pred             CEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCC-CCCEEEEEEE
T ss_conf             889999998589548775372884774755642444345574699999507974310788612200025-5625899982


Q ss_pred             -CCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             -67855189889999460000887468989999999997999999987448721134
Q gi|254780846|r  264 -DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD  319 (324)
Q Consensus       264 -df~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~~~~~~~d  319 (324)
                       ||++||||+.++|+|++|||+|+||+|+|+|++||++|++.||++|+....+..++
T Consensus        83 ~dF~~dlYG~~i~V~~~~~iR~e~KF~s~~~L~~qI~~Di~~ar~~l~~~~~~~~~~  139 (147)
T d1nb9a_          83 HTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKE  139 (147)
T ss_dssp             SCCSSCCTTSEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHTTSHHHHGGGG
T ss_pred             CCCCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
T ss_conf             457875001589999986726984849999999999999999999978814656323


No 5  
>d1coza_ c.26.1.2 (A:) CTP:glycerol-3-phosphate cytidylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=99.30  E-value=3.5e-12  Score=97.11  Aligned_cols=123  Identities=18%  Similarity=0.293  Sum_probs=79.9

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCCCHHH
Q ss_conf             499993156502899999999999502797799983798689847888662000078999988511-3100022564057
Q gi|254780846|r   20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM-GFSALIRYKFTLE   98 (324)
Q Consensus        20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~-Gid~vi~~~F~~~   98 (324)
                      .|++.|.||++|.||+.+|++|.+.+... .+.++-|  +.... .+.+  .+.+.++|...|+++ .+|.++....   
T Consensus         3 ~V~~~G~FD~lH~GH~~~l~~Ak~~gd~l-iV~v~sD--~~~~~-~k~~--pi~~~~eR~~~l~~~~~Vd~v~~~~~---   73 (126)
T d1coza_           3 KVITYGTFDLLHWGHIKLLERAKQLGDYL-VVAISTD--EFNLQ-KQKK--AYHSYEHRKLILETIRYVDEVIPEKN---   73 (126)
T ss_dssp             EEEEEECCCSCCHHHHHHHHHHHTTSSEE-EEEEECH--HHHHH-HTCC--CSSCHHHHHHHHTTBTTCCEEEEECC---
T ss_pred             EEEEEEEECCCCHHHHHHHHHHHHHCCEE-EEEEECC--CHHHH-CCCC--CCCCHHHHHHHHHHHCCCCEEEECCC---
T ss_conf             99991175889989999999998609552-5554033--01120-1475--65778999987543225661465155---


Q ss_pred             HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHH
Q ss_conf             7522830268886214278029998345530337755602467751012641676152230233302303689998
Q gi|254780846|r   99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL  174 (324)
Q Consensus        99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l  174 (324)
                            +++....+ ..+++..+++|+||.      +....++.     +.++..++.  .   ..+|||.||+.|
T Consensus        74 ------~~~~~~~i-~~~~~d~~v~G~D~~------~~~~~~~~-----~~~~i~~~~--~---~~iSST~i~~~I  126 (126)
T d1coza_          74 ------WEQKKQDI-IDHNIDVFVMGDDWE------GKFDFLKD-----QCEVVYLPR--T---EGISTTKIKEEI  126 (126)
T ss_dssp             ------STTHHHHH-HHTTCSEEEEEGGGT------TTTGGGTT-----TSEEEEECC--C---TTCCHHHHHHTC
T ss_pred             ------CCCCHHHH-HCCCCCEEEECCCCC------CCHHHHHC-----CCEEEEECC--C---CCCCHHHHHHHC
T ss_conf             ------31107665-144898766665355------65388873-----988999799--9---984479999749


No 6  
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]}
Probab=99.25  E-value=9.6e-13  Score=100.76  Aligned_cols=151  Identities=13%  Similarity=0.058  Sum_probs=81.7

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC---CCCCC
Q ss_conf             884999931565028999999999995027977999837986898478886620000789999885113100---02256
Q gi|254780846|r   18 KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA---LIRYK   94 (324)
Q Consensus        18 ~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~---vi~~~   94 (324)
                      +..++..|+||.+|+||+.|++.+.+.++..-+++.+..+.|.... +......+.+.++|.++++.+..+.   ++...
T Consensus         2 kkigl~~G~FdP~H~GH~~l~~~a~~~~d~v~v~i~~~~~~~~~~~-~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~   80 (163)
T d1lw7a1           2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLF-YDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHH   80 (163)
T ss_dssp             CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHH-HHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEE
T ss_pred             CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             7699995247989999999999999968944999978998644456-555656789999999999983766784599973


Q ss_pred             CHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHH
Q ss_conf             40577522830268886214278029998345530337755602467751012641676152230233302303689998
Q gi|254780846|r   95 FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL  174 (324)
Q Consensus        95 F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l  174 (324)
                      +........+..+................+.+..|+.+..+    ...+.+.++.++..++.-  ..+..||||.||+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~ISST~IR~~~  154 (163)
T d1lw7a1          81 LVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD----KAPYEKYLGLEVSLVDPD--RTFFNVSATKIRTTP  154 (163)
T ss_dssp             EECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG----HHHHHHHTCCEEECCCSS--CCSSCCCHHHHHHCG
T ss_pred             CCHHCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCHHC----HHHHHHHCCCEEEEEECC--CCCCEECHHHHHHHH
T ss_conf             22111413748899999873134359973677899544212----188998649838999628--899847699999989


Q ss_pred             H
Q ss_conf             7
Q gi|254780846|r  175 T  175 (324)
Q Consensus       175 ~  175 (324)
                      .
T Consensus       155 ~  155 (163)
T d1lw7a1         155 F  155 (163)
T ss_dssp             G
T ss_pred             H
T ss_conf             9


No 7  
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.18  E-value=1.9e-11  Score=92.27  Aligned_cols=135  Identities=13%  Similarity=0.109  Sum_probs=73.7

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf             99993156502899999999999502797799983798689847888662000078999988511310002256405775
Q gi|254780846|r   21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA  100 (324)
Q Consensus        21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a  100 (324)
                      ++..|.||++|+||+.|++++.+.+..  ..|+.-.++      +........+.++|.++++....+.-....+.....
T Consensus         3 gl~~G~FdP~H~GH~~li~~a~~~~d~--v~v~i~~~~------~~~~~~~~~s~~~R~~~i~~~~~~~~~~~~~~~~~~   74 (164)
T d1f9aa_           3 GFIIGRFQPFHKGHLEVIKKIAEEVDE--IIIGIGSAQ------KSHTLENPFTAGERILMITQSLKDYDLTYYPIPIKD   74 (164)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHTTTCSE--EEEEECSTT------CCSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCC
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCC--EEEEECCCC------CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf             999615699988999999999996897--499954776------445767778899999999997533476245213354


Q ss_pred             HCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf             228302688862142780299983455303377556024677510126416761522302333023036899987258
Q gi|254780846|r  101 NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH  178 (324)
Q Consensus       101 ~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd  178 (324)
                      ...+..... .+ +.+...     .++.|+.+     .....+.+..|+++..++..   ....||||.||+++..|+
T Consensus        75 ~~~~~~~~~-~~-~~~~~~-----~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~---~~~~ISST~IR~~i~~g~  137 (164)
T d1f9aa_          75 IEFNSIWVS-YV-ESLTPP-----FDIVYSGN-----PLVRVLFEERGYEVKRPEMF---NRKEYSGTEIRRRMLNGE  137 (164)
T ss_dssp             CSCGGGHHH-HH-HHHSCC-----CSEEECCC-----HHHHHHHHHTTCEEECCCCC---STTTSSHHHHHHHHHHTC
T ss_pred             CCHHHHHHH-HH-HHHCCC-----EEEEECCH-----HHHHHHHHHCCCEEEEECCC---CCCCCCHHHHHHHHHCCC
T ss_conf             320777999-99-752586-----69998284-----99999988269828981476---777767899999999599


No 8  
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.91  E-value=5.7e-10  Score=82.74  Aligned_cols=132  Identities=13%  Similarity=0.139  Sum_probs=70.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC----CCCCCCCCCCH
Q ss_conf             99993156502899999999999502797799983798689847888662000078999988511----31000225640
Q gi|254780846|r   21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM----GFSALIRYKFT   96 (324)
Q Consensus        21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~----Gid~vi~~~F~   96 (324)
                      ++..|.||.+|.||+.+++++.+.+... .+.++..+.|     +.+  ..+.+.++|.++++..    +++........
T Consensus         3 gi~~G~FdP~H~GH~~ii~~a~~~~d~v-~v~i~~~~~~-----~~~--~~~~~~~~R~~mi~~~~~~~~~~~~~~~~~~   74 (167)
T d1ej2a_           3 GLLVGRMQPFHRGHLQVIKSILEEVDEL-IICIGSAQLS-----HSI--RDPFTAGERVMMLTKALSENGIPASRYYIIP   74 (167)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHTTTCSEE-EEEECSTTCC-----SSS--SSCSCHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCCCE-EEEEECCCCC-----CCC--CCCCCHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             9996445999989999999999977963-9997058777-----775--5446689999999997887088703577514


Q ss_pred             HH--HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHH
Q ss_conf             57--7522830268886214278029998345530337755602467751012641676152230233302303689998
Q gi|254780846|r   97 LE--TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL  174 (324)
Q Consensus        97 ~~--~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l  174 (324)
                      ..  .........++.          ++.+.+..|+.+     .....+.+..|+.+..++..   ....||||.||+.+
T Consensus        75 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~---~~~~ISST~IR~~i  136 (167)
T d1ej2a_          75 VQDIECNALWVGHIKM----------LTPPFDRVYSGN-----PLVQRLFSEDGYEVTAPPLF---YRDRYSGTEVRRRM  136 (167)
T ss_dssp             CCCCSCHHHHHHHHHH----------HSCCCSEEECCC-----HHHHHHHHHTTCCEECCCCS---STTTSSHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHE----------EEECEEEEECCH-----HHHHHHHHCCCCEEEECCCC---CCCCCCHHHHHHHH
T ss_conf             2033357879988762----------031204898536-----99988777179769964621---24655689999999


Q ss_pred             HHHH
Q ss_conf             7258
Q gi|254780846|r  175 TKGH  178 (324)
Q Consensus       175 ~~Gd  178 (324)
                      ..|+
T Consensus       137 ~~g~  140 (167)
T d1ej2a_         137 LDDG  140 (167)
T ss_dssp             HHTC
T ss_pred             HCCC
T ss_conf             8599


No 9  
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]}
Probab=98.78  E-value=9.1e-09  Score=74.88  Aligned_cols=168  Identities=18%  Similarity=0.233  Sum_probs=107.7

Q ss_pred             CEEECCCCCCC-CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             94224885211-27610188499993156502899999999999502797799983798689847888662000078999
Q gi|254780846|r    1 MHVFHNIEINQ-SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE   79 (324)
Q Consensus         1 Mki~~~~~~~~-~~p~~~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~   79 (324)
                      |++++++.... .++...=+.|-|+|   ++|-||..|++++.+.+   ..+|+|.--+|..|-.++.-..+-.++++-+
T Consensus         1 M~~i~~~~el~~~l~~~~i~~VPTMG---aLH~GHlsLi~~a~~~~---~~vvvSIFVNP~QF~~~eD~~~YPr~~~~D~   74 (276)
T d1v8fa_           1 MRTVSTVAELRAALPREGVGFVPTMG---YLHRGHLALVERARREN---PFVVVSVFVNPLQFGPGEDYHRYPRDLERDR   74 (276)
T ss_dssp             CEEECSHHHHHHHCCSSCEEEEEECS---SCCHHHHHHHHHHHHHC---SEEEEEECCCGGGCCTTSSTTTSCCCHHHHH
T ss_pred             CEEECCHHHHHHHHCCCCEEEECCCC---CHHHHHHHHHHHHHHHC---CCEEEEEEECCCCCCCCCHHHCCCCCHHHHH
T ss_conf             96974099999986059889985876---07489999999999758---9789999866766787101220564256349


Q ss_pred             HHHHHCCCCCCCCCCCHHHHH---------------HC-----CCHHH------HHHHHCCCCCEEEEEEC-CCCCCCCC
Q ss_conf             988511310002256405775---------------22-----83026------88862142780299983-45530337
Q gi|254780846|r   80 KILEKMGFSALIRYKFTLETA---------------NY-----SAEQF------IQKVLVEWLEVKTVITG-TKFRFGKD  132 (324)
Q Consensus        80 ~~l~~~Gid~vi~~~F~~~~a---------------~l-----s~e~F------i~~iL~~~l~~k~ivVG-~Df~FG~~  132 (324)
                      ++|++.|+|.++..+-+ ++.               ++     -|..|      +.+ |.+..++...+-| .||.    
T Consensus        75 ~~l~~~~vd~vf~P~~~-e~yp~~~~~~~~~~~~l~~~leG~~RPgHF~GV~tVV~k-Lf~ii~P~~a~fGeKD~Q----  148 (276)
T d1v8fa_          75 ALLQEAGVDLLFAPGVE-EMYPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVAR-LFLLVQPQRAYFGEKDYQ----  148 (276)
T ss_dssp             HHHHHTTCSEEECCCHH-HHSCTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEEGGGHH----
T ss_pred             HHHHHCCCCEEEECCCC-CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCEEEEEECCHH----
T ss_conf             99985799799833533-456655532799635335556689897137789999999-996457650145400235----


Q ss_pred             CCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             7556024677510126--4167615223023330230368999872589999985
Q gi|254780846|r  133 RAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL  185 (324)
Q Consensus       133 r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l  185 (324)
                         -...++++.+.++  ++++.+|.++..+|-..||.+.  +|..-+.+.|..+
T Consensus       149 ---Ql~iIk~mv~~l~~~i~Ii~~ptvRe~dGLAlSSRN~--~Ls~~er~~A~~i  198 (276)
T d1v8fa_         149 ---QLLVVRRMVRDLGFPVEVVGVPTVREEDGLALSSRNV--YLSPETRKKAPVL  198 (276)
T ss_dssp             ---HHHHHHHHHHHHTCCCEEEEECCCBCTTSCBCCGGGG--GCCHHHHHHTTHH
T ss_pred             ---HHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEHHHH--HCCCHHHHHHHHH
T ss_conf             ---8999999999828980799876675036402102455--5252145567888


No 10 
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]}
Probab=98.55  E-value=4e-08  Score=70.69  Aligned_cols=168  Identities=18%  Similarity=0.191  Sum_probs=106.8

Q ss_pred             CEEECCCCCCCCCCCCC---C---CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCH
Q ss_conf             94224885211276101---8---84999931565028999999999995027977999837986898478886620000
Q gi|254780846|r    1 MHVFHNIEINQSLPNHL---K---GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP   74 (324)
Q Consensus         1 Mki~~~~~~~~~~p~~~---~---~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~   74 (324)
                      |+|++++..-...-...   .   +.|-|+|   ++|-||..|++++.+.   ...+|+|.--+|..|-.++.-..+-.+
T Consensus         1 M~ii~~~~~l~~~~~~~r~~g~~ig~VPTMG---aLH~GHlsLi~~A~~~---~~~vvvSIFVNP~QF~~~eD~~~YPr~   74 (282)
T d1ihoa_           1 MLIIETLPLLRQQIRRLRMEGKRVALVPTMG---NLHDGHMKLVDEAKAR---ADVVVVSIFVNPMQFDRPEDLARYPRT   74 (282)
T ss_dssp             CEEECSHHHHHHHHHHHHHTTCCEEEEEECS---CCCHHHHHHHHHHHHH---CSEEEEEECCCGGGCSSHHHHHHSCCC
T ss_pred             CEEECCHHHHHHHHHHHHHCCCCEEEECCCC---CHHHHHHHHHHHHHHH---CCCEEEEEEECCCCCCCCCHHHCCCCC
T ss_conf             9788149999999999997499099982875---0548999999999874---896899997367657642112126763


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCHHHHHH--------CC-------------CHHH------HHHHHCCCCCEEEEEEC-CC
Q ss_conf             789999885113100022564057752--------28-------------3026------88862142780299983-45
Q gi|254780846|r   75 PSIQEKILEKMGFSALIRYKFTLETAN--------YS-------------AEQF------IQKVLVEWLEVKTVITG-TK  126 (324)
Q Consensus        75 ~~~k~~~l~~~Gid~vi~~~F~~~~a~--------ls-------------~e~F------i~~iL~~~l~~k~ivVG-~D  126 (324)
                      ++.-+++|++.|+|.++..+-. ++..        .+             |..|      +.+ |.+..++...+-| .|
T Consensus        75 l~~D~~~l~~~~vd~vf~P~~~-e~yp~~~~~~~~i~~~~l~~~leG~~RPgHF~GV~tVV~k-Lf~iv~P~~a~FGeKD  152 (282)
T d1ihoa_          75 LQEDCEKLNKRKVDLVFAPSVK-EIYPNGTETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSK-LFNLVQPDIACFGEKD  152 (282)
T ss_dssp             HHHHHHHHHHTTCSEEECCCHH-HHCTTCSTTSCEEECTTGGGSTHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEETTS
T ss_pred             HHHHHHHHHHCCCCEEEECCCC-CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCEEEEEEEC
T ss_conf             8888999975499589963741-1223445520366145210135788786057889999999-9986676357998716


Q ss_pred             CCCCCCCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             5303377556024677510126--4167615223023330230368999872589999985
Q gi|254780846|r  127 FRFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL  185 (324)
Q Consensus       127 f~FG~~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l  185 (324)
                      |.       -...++++.+.++  ++++.+|.++..+|-..||.+.  .|..-+.+.|..+
T Consensus       153 ~Q-------Ql~iIk~mv~~~~~~i~Ii~~ptvRe~dGLAlSSRN~--~Ls~~er~~A~~i  204 (282)
T d1ihoa_         153 FQ-------QLALIRKMVADMGFDIEIVGVPIMRAKDGLALSSRNG--YLTAEQRKIAPGL  204 (282)
T ss_dssp             HH-------HHHHHHHHHHHHTCCCEEEEECCCBCTTSCBCCGGGG--GSCHHHHHHTTHH
T ss_pred             CC-------EEEEHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHH--HCCHHHHHHHHHH
T ss_conf             66-------0221999998607984687533341236711124556--5011356778899


No 11 
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]}
Probab=98.55  E-value=5.2e-07  Score=63.49  Aligned_cols=165  Identities=10%  Similarity=0.108  Sum_probs=84.5

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE-EEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHH--CCCCCCCCCCC
Q ss_conf             849999315650289999999999950279779-998379868984788866200007899998851--13100022564
Q gi|254780846|r   19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK--MGFSALIRYKF   95 (324)
Q Consensus        19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~-viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~--~Gid~vi~~~F   95 (324)
                      ..|++.|+||-+|.||..|.+.+.+..+-.... +.+..|       +.+......+..++..++..  .+.+.+.+-+|
T Consensus        20 ~~v~~f~TfnP~H~GHl~ia~~a~~~~~ld~v~~iP~~~~-------p~K~~~~~~~~~~r~~m~~~a~~~~~~~~is~~   92 (223)
T d1jhda2          20 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK-------LKKGDIPAPVRDAAIRTMAEVYFPPNTVMVTGY   92 (223)
T ss_dssp             SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC-------CCTTCCCHHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCC-------CCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCC
T ss_conf             8898862789998999999999999727585698326677-------776777644499999999986357884364351


Q ss_pred             HHHHHHCCCH-HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHC-----CCCEEEECCH-------------
Q ss_conf             0577522830-26888621427802999834553033775560246775101-----2641676152-------------
Q gi|254780846|r   96 TLETANYSAE-QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK-----YGFHTVFIDE-------------  156 (324)
Q Consensus        96 ~~~~a~ls~e-~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~-----~g~~v~~i~~-------------  156 (324)
                      ......-|+. +-++.+-....+...+++|.|.....+.-...+.+..++..     .+......+.             
T Consensus        93 E~~~~~~syt~~tl~~l~~~~~~~~~~iiG~D~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (223)
T d1jhda2          93 GFDMLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNKIVMM  172 (223)
T ss_dssp             ECCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTTEEEEG
T ss_pred             CCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEH
T ss_conf             11025787199999999985885607888615301335767078888998613123556543342167776552230005


Q ss_pred             --HHCCC---CCCCCHHHHHHHHHHHH-H------HHHHHHHHHCC
Q ss_conf             --23023---33023036899987258-9------99998500000
Q gi|254780846|r  157 --LRNNK---SQIVSSSNIRTALTKGH-V------LNAAHLLGYRF  190 (324)
Q Consensus       157 --~~~~~---~~~ISSt~IR~~l~~Gd-i------~~an~lLGr~y  190 (324)
                        .....   -..||||.||+.|++|. +      .++.+++-..|
T Consensus       173 ~~~~~~~~~~~i~ISST~IR~~l~~G~~ip~~l~~p~V~~yI~~~y  218 (223)
T d1jhda2         173 RDVPDHTKEDFVLLSGTKVREMLGQGIAPPPEFSRPEVAKILMDYY  218 (223)
T ss_dssp             GGCTTCCGGGEECCCHHHHHHHHHTTCCCCTTTCCHHHHHHHHHHH
T ss_pred             HHHHCCCCCCCCEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             4301005788614378999999987379984557889999999999


No 12 
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.53  E-value=4.8e-08  Score=70.18  Aligned_cols=169  Identities=16%  Similarity=0.189  Sum_probs=104.1

Q ss_pred             CEEECCCCCCCCCCCCC---CC---EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCH
Q ss_conf             94224885211276101---88---4999931565028999999999995027977999837986898478886620000
Q gi|254780846|r    1 MHVFHNIEINQSLPNHL---KG---GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP   74 (324)
Q Consensus         1 Mki~~~~~~~~~~p~~~---~~---~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~   74 (324)
                      |+||++...-...-...   ..   .|-|+|   ++|.||..|++++.+.  ....+|+|.--+|..|-.++.-..+-.+
T Consensus         9 m~i~~~~~~l~~~~~~~~~~g~~i~~VPTMG---aLH~GHlsLi~~a~~~--~~~~vvvSIFVNP~QF~~~eD~~~YPr~   83 (286)
T d2a84a1           9 LNVYSAPGDVADVSRALRLTGRRVMLVPTMG---ALHEGHLALVRAAKRV--PGSVVVVSIFVNPMQFGAGGDLDAYPRT   83 (286)
T ss_dssp             CEEECSHHHHHHHHHHHHHTTCCEEEEEECS---SCCHHHHHHHHHHHTS--TTCEEEEEECCCCCCTTC----------
T ss_pred             EEEECCHHHHHHHHHHHHHHCCEEEEEECCC---CHHHHHHHHHHHHHHC--CCCEEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf             0999189999999999998299089993886---3418999999998643--7987999986466556755657669965


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCHHHHHH------CCC-------------HHH------HHHHHCCCCCEEEEEEC-CCCC
Q ss_conf             789999885113100022564057752------283-------------026------88862142780299983-4553
Q gi|254780846|r   75 PSIQEKILEKMGFSALIRYKFTLETAN------YSA-------------EQF------IQKVLVEWLEVKTVITG-TKFR  128 (324)
Q Consensus        75 ~~~k~~~l~~~Gid~vi~~~F~~~~a~------ls~-------------e~F------i~~iL~~~l~~k~ivVG-~Df~  128 (324)
                      +++-+++|++.|+|.++..+-+ ++-.      .++             ..|      +.+ |.+..++...+.| .||.
T Consensus        84 ~~~D~~~l~~~~vd~vf~P~~~-~iyp~~~~~~v~~~~~~~~leG~~RpgHF~GV~tVV~k-Lf~ii~P~~a~fGeKD~Q  161 (286)
T d2a84a1          84 PDDDLAQLRAEGVEIAFTPTTA-AMYPDGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVLK-LLQIVRPDRVFFGEKDYQ  161 (286)
T ss_dssp             CCSHHHHHHHTTCCEEECCCHH-HHCTTCSCSCCCCCGGGGSGGGTTCTTHHHHHHHHHHH-HHHHHCCSEEEEETTSHH
T ss_pred             HHHHHHHHHCCCCCEEECCCHH-HHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHCCCCEEEEEECCCH
T ss_conf             5554677760687425325312-21257850257345202201467770778889999999-998626655787631417


Q ss_pred             CCCCCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             03377556024677510126--4167615223023330230368999872589999985
Q gi|254780846|r  129 FGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL  185 (324)
Q Consensus       129 FG~~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l  185 (324)
                             -...++++.+.++  ++++.+|.++..+|-..||.+-  +|..-+-..|..+
T Consensus       162 -------Ql~iIk~~v~~l~~~i~Ii~~pTvRe~dGLAlSSRN~--~Ls~~er~~A~~i  211 (286)
T d2a84a1         162 -------QLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNR--YLDPAQRAAAVAL  211 (286)
T ss_dssp             -------HHHHHHHHHHHTTCCCEEEEECCCBCTTSCBCCGGGG--GCCHHHHHHTHHH
T ss_pred             -------HHHHHHHHHHHHCCCCEEEECCHHHHCCCEEHHHHHH--HCCCCHHHHHHHH
T ss_conf             -------9999999999846664178615212103111133545--2242014678999


No 13 
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=98.51  E-value=8.4e-07  Score=62.11  Aligned_cols=147  Identities=16%  Similarity=0.003  Sum_probs=73.8

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf             99993156502899999999999502797799983798689847888662000078999988511310002256405775
Q gi|254780846|r   21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA  100 (324)
Q Consensus        21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a  100 (324)
                      ++--|.||.+|+||+++++.|.+..+ ...++++..+.|..-...     ......++.......-.+......++.+..
T Consensus         5 alfgGSFdP~H~GH~~ii~~a~~~~~-~~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~   78 (189)
T d1kama_           5 GIFGGTFDPPHNGHLLMANEVLYQAG-LDEIWFMPNQIPPHKQNE-----DYTDSFHRVEMLKLAIQSNPSFKLELVEME   78 (189)
T ss_dssp             EEEEECCSSCCHHHHHHHHHHHHHTT-CSEEEEEECCCC--------------CHHHHHHHHHHHHTTCTTEEECCGGGS
T ss_pred             EEECCCCCCCCHHHHHHHHHHHHHCC-CCEEEEEECCCCCCCCCC-----HHHHHHHHHHHHHHHHCCCCCEEECHHHHC
T ss_conf             99663769898899999999999829-998999963577632110-----146789888887765036762122012230


Q ss_pred             HCCCH------HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCH----------HHCCCCCC
Q ss_conf             22830------268886214278029998345530337755602467751012641676152----------23023330
Q gi|254780846|r  101 NYSAE------QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE----------LRNNKSQI  164 (324)
Q Consensus       101 ~ls~e------~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~----------~~~~~~~~  164 (324)
                      ...+.      .++...  ........++|.|...........+.+...+.   ..+.....          ........
T Consensus        79 ~~~~~~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (189)
T d1kama_          79 REGPSYTFDTVSLLKQR--YPNDQLFFIIGADMIEYLPKWYKLDELLNLIQ---FIGVKRPGFHVETPYPLLFADVPEFE  153 (189)
T ss_dssp             TTCCCSHHHHHHHHHHH--STTSEEEEEEETTTTTTCCCCHHHHHHHHHSE---EEEEECSSCCCCCSSCCEEEECCCBC
T ss_pred             CCCCCEEHHHHHHHHHC--CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCC---EEECCCCCCCCCCCHHHHCCCCCCCC
T ss_conf             67860205556677632--77630222110000112121000354431123---11104632111100132102365576


Q ss_pred             CCHHHHHHHHHHHH
Q ss_conf             23036899987258
Q gi|254780846|r  165 VSSSNIRTALTKGH  178 (324)
Q Consensus       165 ISSt~IR~~l~~Gd  178 (324)
                      ||||.||+++..|.
T Consensus       154 ISST~IR~~i~~~~  167 (189)
T d1kama_         154 VSSTMIRERFKSKK  167 (189)
T ss_dssp             CCHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHCCC
T ss_conf             87599999998399


No 14 
>d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]}
Probab=98.37  E-value=8.3e-07  Score=62.13  Aligned_cols=70  Identities=14%  Similarity=0.101  Sum_probs=39.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCC-CCEEEE--EECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCC
Q ss_conf             999931565028999999999995027-977999--83798689847888662000078999988511--3100022564
Q gi|254780846|r   21 VVAIGNFDGIHLGHHLILEQAIKIANN-SPITVL--SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GFSALIRYKF   95 (324)
Q Consensus        21 vvtiG~FDGvH~GHq~Li~~~~~~a~~-~~~~vi--TF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~--Gid~vi~~~F   95 (324)
                      ++.-|.||-+|.||..+++.+.+.-+. ....++  -+.|+     ++......+.+.++|..+++..  +.+.+.+-++
T Consensus         7 l~~~GSFdP~H~GHl~i~~~a~~~~~~~~~~~~~~~~~~p~-----~~~~~~~~~~~~~~R~~M~~la~~~~~~~~v~~~   81 (233)
T d1nuua_           7 LLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPV-----NDTYGKKDLAASHHRVAMARLALQTSDWIRVDPW   81 (233)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHHHHHSSEEEEEEEEEEC-----CTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCH
T ss_pred             EEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC-----CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHH
T ss_conf             99830428428999999999999867102311103798367-----7875567668999999999999844587787369


No 15 
>d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.27  E-value=2.3e-06  Score=59.24  Aligned_cols=69  Identities=17%  Similarity=0.113  Sum_probs=40.4

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHC-CCC--EEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCC
Q ss_conf             9993156502899999999999502-797--799983798689847888662000078999988511--3100022564
Q gi|254780846|r   22 VAIGNFDGIHLGHHLILEQAIKIAN-NSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GFSALIRYKF   95 (324)
Q Consensus        22 vtiG~FDGvH~GHq~Li~~~~~~a~-~~~--~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~--Gid~vi~~~F   95 (324)
                      +.-|+||-+|.||..+++.+.+.-. ...  ..-+-|.|....   +.++  .+++.++|+++++.+  +.+.+.+-++
T Consensus         8 l~~GSFdP~H~GHl~ia~~a~~~l~~~~~~~~~~~~~~P~~~~---~~k~--~~~s~~~Rl~Ml~la~~~~~~~~vs~~   81 (271)
T d1kr2a_           8 LACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDA---YKKK--GLIPAYHRVIMAELATKNSKWVEVDTW   81 (271)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGG---GCCT--TCCCHHHHHHHHHHHTTTCSSEEECCH
T ss_pred             EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC---CCCC--CCCCHHHHHHHHHHHHHCCCCEEEEEH
T ss_conf             9704467423999999999999974425615467999648998---7677--889999999999999856998899521


No 16 
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.15  E-value=2.9e-06  Score=58.63  Aligned_cols=37  Identities=35%  Similarity=0.496  Sum_probs=26.9

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCH
Q ss_conf             4999931565028999999999995027977999837986
Q gi|254780846|r   20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP   59 (324)
Q Consensus        20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P   59 (324)
                      .+|..|.||-+|+||..+++++.+..   ..+++.+.+.|
T Consensus         3 ~Av~~GsFdPiH~GHl~i~~~a~~~~---d~~~v~~~~~~   39 (157)
T d1tfua_           3 GAVCPGSFDPVTLGHVDIFERAAAQF---DEVVVAILVNP   39 (157)
T ss_dssp             EEEEEECCTTCCHHHHHHHHHHHHHS---SEEEEEEECCS
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHC---CHHHHHCCCCC
T ss_conf             76848478988789999999999845---86774125567


No 17 
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=98.12  E-value=5.9e-06  Score=56.62  Aligned_cols=133  Identities=13%  Similarity=0.053  Sum_probs=60.5

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCHHH
Q ss_conf             999931565028999999999995027977999837986898478886620000789999885113--100022564057
Q gi|254780846|r   21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--FSALIRYKFTLE   98 (324)
Q Consensus        21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~G--id~vi~~~F~~~   98 (324)
                      +|-.|.||-+|.||..+++.+.+...   -+++.-.+.|.     .   ....+.++|.+++...-  ........|   
T Consensus         4 aifgGsFdPiH~GHl~i~~~a~~~~D---~v~v~~~~~~~-----~---~~~~~~~~r~~~~~~~~~~~~~~~~~~~---   69 (163)
T d1o6ba_           4 AVCPGSFDPVTYGHLDIIKRGAHIFE---QVYVCVLNNSS-----K---KPLFSVEERCELLREVTKDIPNITVETS---   69 (163)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHSS---EEEEEECCCCS-----S---CCSSCHHHHHHHHHHHHTTCTTEEEEEC---
T ss_pred             EEECCCCCCCCHHHHHHHHHHHHHCC---EEEECCCCCCC-----C---CCCCCHHHHHHHHHHHCCCCCCCEECCC---
T ss_conf             99660669888899999999998689---77870353222-----2---2358999999987641035675300134---


Q ss_pred             HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC-HHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             75228302688862142780299983455303377556-02467751012641676152230233302303689998725
Q gi|254780846|r   99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD-RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG  177 (324)
Q Consensus        99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd-~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~G  177 (324)
                         .....+....... ..  ......++.-. ..... ...-+.+.  ..++...+..  ......||||.||+.+..|
T Consensus        70 ---~~~~~~~~~~~~~-~~--~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~ISST~IR~~i~~g  138 (163)
T d1o6ba_          70 ---QGLLIDYARRKNA-KA--ILRGLRAVSDF-EYEMQGTSVNRVLD--ESIETFFMMA--NNQYSFLSSSIVKEVARYD  138 (163)
T ss_dssp             ---SSCHHHHHHHTTC-SE--EEEEECSGGGH-HHHHHHHHHHHHHC--TTSEEEEEEC--CSTTTTCCHHHHHHHHHTT
T ss_pred             ---CCCCCCCCEECCC-CE--EEEEECCCCHH-HHHHHHHHHHHHHC--CCCCEEECCC--CCHHHCCCHHHHHHHHHCC
T ss_conf             ---4543322200275-03--45420374124-66778999999858--5653675234--2000001779999999929


Q ss_pred             H
Q ss_conf             8
Q gi|254780846|r  178 H  178 (324)
Q Consensus       178 d  178 (324)
                      .
T Consensus       139 ~  139 (163)
T d1o6ba_         139 G  139 (163)
T ss_dssp             C
T ss_pred             C
T ss_conf             9


No 18 
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]}
Probab=98.07  E-value=6.1e-06  Score=56.48  Aligned_cols=26  Identities=31%  Similarity=0.508  Sum_probs=22.1

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf             99993156502899999999999502
Q gi|254780846|r   21 VVAIGNFDGIHLGHHLILEQAIKIAN   46 (324)
Q Consensus        21 vvtiG~FDGvH~GHq~Li~~~~~~a~   46 (324)
                      ++--|.||-+|+||+.+++++.+..+
T Consensus         3 ~ifgGsFdP~H~GHl~ii~~a~~~~D   28 (160)
T d1od6a_           3 VVYPGSFDPLTNGHLDVIQRASRLFE   28 (160)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHSS
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf             99423268767999999999998488


No 19 
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]}
Probab=98.04  E-value=2e-05  Score=53.14  Aligned_cols=34  Identities=24%  Similarity=0.379  Sum_probs=24.8

Q ss_pred             EECCCCCCHHHHHHHHHHHHHHCCCCE-EEEEECC
Q ss_conf             931565028999999999995027977-9998379
Q gi|254780846|r   24 IGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNP   57 (324)
Q Consensus        24 iG~FDGvH~GHq~Li~~~~~~a~~~~~-~viTF~p   57 (324)
                      =|.||-+|.||..+++.+.+..+.... ++.+.+|
T Consensus         9 gGSFnP~h~GHl~~~~~a~~~~~~d~v~~~p~~~~   43 (213)
T d1k4ma_           9 GGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVP   43 (213)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSC
T ss_pred             ECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf             04758484999999999999709998999992888


No 20 
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]}
Probab=97.93  E-value=3.2e-06  Score=58.29  Aligned_cols=27  Identities=30%  Similarity=0.428  Sum_probs=22.2

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf             499993156502899999999999502
Q gi|254780846|r   20 GVVAIGNFDGIHLGHHLILEQAIKIAN   46 (324)
Q Consensus        20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~   46 (324)
                      -++=.|.||-+|.||+.+++.+.+...
T Consensus         2 ~AifgGsFdP~H~GHl~li~~a~~~~D   28 (157)
T d1qjca_           2 RAIYPGTFDPITNGHIDIVTRATQMFD   28 (157)
T ss_dssp             EEEEEECCTTCCHHHHHHHHHHHTTSS
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf             799802468788999999999998579


No 21 
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=97.81  E-value=2.2e-05  Score=52.83  Aligned_cols=25  Identities=44%  Similarity=0.628  Sum_probs=21.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             9999315650289999999999950
Q gi|254780846|r   21 VVAIGNFDGIHLGHHLILEQAIKIA   45 (324)
Q Consensus        21 vvtiG~FDGvH~GHq~Li~~~~~~a   45 (324)
                      ++=.|.||-+|.||..+++++.+..
T Consensus         3 aifgGsFdPiH~GHl~i~~~a~~~~   27 (157)
T d1vlha_           3 AVYPGSFDPITLGHVDIIKRALSIF   27 (157)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf             8972337988689999999999853


No 22 
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.62  E-value=0.0004  Score=44.69  Aligned_cols=151  Identities=17%  Similarity=0.143  Sum_probs=88.4

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHC--C--CCEEEEEECCCHHHHHCCCCCCCCCCHHHHHH----HHHHH--CCCC
Q ss_conf             8499993156502899999999999502--7--97799983798689847888662000078999----98851--1310
Q gi|254780846|r   19 GGVVAIGNFDGIHLGHHLILEQAIKIAN--N--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE----KILEK--MGFS   88 (324)
Q Consensus        19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~--~--~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~----~~l~~--~Gid   88 (324)
                      .+|++.=+=.-+|+||..|++.+.+...  .  ...+++.    |.  ..+.++...  +.+-+.    .++.+  +.-+
T Consensus        24 ~~VvaFqTRNp~HraHe~i~~~a~~~~~~~~~~~~~lli~----Pv--vG~~k~gD~--~~~~~~~~y~~l~~~~~~~~~   95 (235)
T d1x6va2          24 DAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLH----PL--GGWTKDDDV--PLMWRMKQHAAVLEEGVLNPE   95 (235)
T ss_dssp             SEEEEEEESSCCCHHHHHHHHHHHHHHHHTTCSSEEEEEE----EB--CSCCCTTSC--CHHHHHHHHHHHHHTTSSCGG
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE----EC--CCCCCCCCC--CHHHHHHHHHHHHHHCCCCCC
T ss_conf             7677863289986789999999999987433557728983----01--156777764--818899999999984268977


Q ss_pred             CCCCCCCH--HHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCC--CCC--------CHHHHHHHHHCCCCEEEECCH
Q ss_conf             00225640--577522830268886214278029998345530337--755--------602467751012641676152
Q gi|254780846|r   89 ALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD--RAG--------DRGILQKRGEKYGFHTVFIDE  156 (324)
Q Consensus        89 ~vi~~~F~--~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~--r~G--------d~~~L~~~~~~~g~~v~~i~~  156 (324)
                      .+++..+.  ..+|. .-|..+..++.+.+++.+++||-|+. |-+  ..|        ..+.+.++.++.|++++....
T Consensus        96 ~~~l~~l~~~mryAG-PrEAllhAiiRkN~GcThfiVGRDHA-G~g~~~~~~~~y~~~~a~~~~~~~~~~l~I~ii~~~~  173 (235)
T d1x6va2          96 TTVVAIFPSPMMYAG-PTEVQWHCRARMVAGANFYIVGRDPA-GMPHPETGKDLYEPSHGAKVLTMAPGLITLEIVPFRV  173 (235)
T ss_dssp             GEEECCBCCCCCCCH-HHHHHHHHHHHHHTTCSEEEECSSTT-CCBCTTTCSBSSCTTHHHHHHHHCSSCTTSEEEECCC
T ss_pred             CEEEEECCCCCCCCC-CHHHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECC
T ss_conf             579973366544466-08999999999864887588767666-7788766654568427899987363335324654121


Q ss_pred             HHC---------------CCCCCCCHHHHHHHHHHHHH
Q ss_conf             230---------------23330230368999872589
Q gi|254780846|r  157 LRN---------------NKSQIVSSSNIRTALTKGHV  179 (324)
Q Consensus       157 ~~~---------------~~~~~ISSt~IR~~l~~Gdi  179 (324)
                      +..               .+-..||.|.||++|..|..
T Consensus       174 ~~Yc~~~~~~~~~~~~~~~~~~~ISGT~iR~~L~~G~~  211 (235)
T d1x6va2         174 AAYNKKKKRMDYYDSEHHEDFEFISGTRMRKLAREGQK  211 (235)
T ss_dssp             EEEETTTTEEEECCSTTGGGEECCCHHHHHHHHHTTCC
T ss_pred             EEEECCCCCEECCCCCCCCCEEEECHHHHHHHHHCCCC
T ss_conf             13304578463277899877065268999999987498


No 23 
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.41  E-value=0.00054  Score=43.83  Aligned_cols=150  Identities=16%  Similarity=0.196  Sum_probs=84.3

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHH----HHHHCCCCCCCCCC
Q ss_conf             84999931565028999999999995027977999837986898478886620000789999----88511310002256
Q gi|254780846|r   19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK----ILEKMGFSALIRYK   94 (324)
Q Consensus        19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~----~l~~~Gid~vi~~~   94 (324)
                      ..|++.=+=.-+|+||..|++++.+.++ .. +++.    |.  +.+.++..  .+.+-+.+    +++.+.-+.+++.+
T Consensus        21 ~~v~afqTrnp~Hr~He~i~~~a~~~~~-~~-lli~----p~--vg~~k~gd--~~~~~~~~~~~~~~~~~~~~~~~l~~   90 (221)
T d1g8fa2          21 DRVVAFQTRNPMHRAHRELTVRAAREAN-AK-VLIH----PV--VGLTKPGD--IDHHTRVRVYQEIIKRYPNGIAFLSL   90 (221)
T ss_dssp             CCEEEEEESSCCCHHHHHHHHHHHHHHT-CE-EEEE----EB--CSBCSTTC--CCHHHHHHHHHHHGGGSCTTSEEECC
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHCC-CC-EEEE----EC--CCCCCCCC--CCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             8688986389997789999999998548-98-8994----02--15776455--79799999999999746898589972


Q ss_pred             CHHHHHHC-CCHHHHHHHHCCCCCEEEEEECCCCCC-CCCCCC--------CHHHHHHHHHCCCCEEEECCHHH------
Q ss_conf             40577522-830268886214278029998345530-337755--------60246775101264167615223------
Q gi|254780846|r   95 FTLETANY-SAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG--------DRGILQKRGEKYGFHTVFIDELR------  158 (324)
Q Consensus        95 F~~~~a~l-s~e~Fi~~iL~~~l~~k~ivVG~Df~F-G~~r~G--------d~~~L~~~~~~~g~~v~~i~~~~------  158 (324)
                      +.....-- .-|.....++-+.+++.+++||-|..= |.+..|        ....+.++.++.|++++..+.+.      
T Consensus        91 ~~~~m~yaGPrEA~lhAiirkN~GcthfiVGRDHAG~g~~~~~~~~Y~~~~a~~~~~~~~~~l~I~ii~~~~~~Yc~~c~  170 (221)
T d1g8fa2          91 LPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYLPDED  170 (221)
T ss_dssp             BCCBCCCCHHHHHHHHHHHHHHTTCSEEECCTTTTCCCBCTTSCBSSCTTHHHHHHHHTHHHHCSEEECCCCEEEEGGGT
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCCC
T ss_conf             36300245538899999999863888068646456878898642235714567888751644560231245146621377


Q ss_pred             -------C--CC--CCCCCHHHHHHHHHHHH
Q ss_conf             -------0--23--33023036899987258
Q gi|254780846|r  159 -------N--NK--SQIVSSSNIRTALTKGH  178 (324)
Q Consensus       159 -------~--~~--~~~ISSt~IR~~l~~Gd  178 (324)
                             +  .+  -..||+|.||++|.+|.
T Consensus       171 ~~v~~~~c~h~~~~~i~ISGT~iR~~L~~G~  201 (221)
T d1g8fa2         171 RYAPIDQIDTTKTRTLNISGTELRRRLRVGG  201 (221)
T ss_dssp             EEEEGGGCSSSCCCCBCCCHHHHHHHHHHTC
T ss_pred             EEEECCCCCCCCCCEEEECHHHHHHHHHCCC
T ss_conf             1877665689867548746899999998799


No 24 
>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]}
Probab=96.88  E-value=0.017  Score=34.15  Aligned_cols=148  Identities=12%  Similarity=0.208  Sum_probs=83.2

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHH----HHHH-CCCCCCCCC
Q ss_conf             84999931565028999999999995027977999837986898478886620000789999----8851-131000225
Q gi|254780846|r   19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK----ILEK-MGFSALIRY   93 (324)
Q Consensus        19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~----~l~~-~Gid~vi~~   93 (324)
                      ..|++.=+=.-+|+||..|++.+.+.+++   +++.+    .  +.+.++...  +.+-+.+    +++. +.-+.+++.
T Consensus        21 ~~v~aFqTrnp~Hr~He~i~~~a~~~~~~---lli~p----~--vG~~k~gd~--~~~~r~~~y~~~~~~~~~~~~v~l~   89 (214)
T d1v47a2          21 RKVVAFQTRNAPHRAHEYLIRLGLELADG---VLVHP----I--LGAKKPDDF--PTEVIVEAYQALIRDFLPQERVAFF   89 (214)
T ss_dssp             CSEEEEEESSCCCHHHHHHHHHHHHHSSE---EEEEE----B--CSCCCTTSC--CHHHHHHHHHHHHHHHSCGGGEEEC
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHCCC---EEEEE----E--ECCCCCCCC--CHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             87988723899878999999999970587---79964----2--236875665--8899999999998523787729998


Q ss_pred             CCHHHHHHCCC-HHHHHHHHCCCCCEEEEEECCCCCCCCCCCC---CH-HHHHHHHHCCCCEEEECCHHH----------
Q ss_conf             64057752283-0268886214278029998345530337755---60-246775101264167615223----------
Q gi|254780846|r   94 KFTLETANYSA-EQFIQKVLVEWLEVKTVITGTKFRFGKDRAG---DR-GILQKRGEKYGFHTVFIDELR----------  158 (324)
Q Consensus        94 ~F~~~~a~ls~-e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~G---d~-~~L~~~~~~~g~~v~~i~~~~----------  158 (324)
                      ++.....--.| |.....++-+.+++.+.+||-|.. |.+.-=   +. ..++++ ++.|++++..+.+.          
T Consensus        90 ~~~~~m~yaGPrEA~lhAiirkN~GcthfiVGRDHA-G~g~~Y~~~~a~~i~~~~-~~l~I~ii~~~e~~Yc~~c~~~v~  167 (214)
T d1v47a2          90 GLATPMRYAGPKEAVFHALVRKNFGATHFLVGRDHA-GVGDFYDPYAAHRIFDRL-PPLGIEIVKVGAVFHCPLCGGIAS  167 (214)
T ss_dssp             CBCSCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT-CSTTCSCTTHHHHGGGGS-CCCSSEEEECCCEEEETTTTEEEE
T ss_pred             ECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC-CHHHCCCCHHHHHHHHHC-CCCCCEEEECCCCEEEHHHCCEEE
T ss_conf             547621004615899999999865887388747677-622137933556898757-726826997162253364385633


Q ss_pred             ---CCCC-----CCCCHHHHHHHHHHHHH
Q ss_conf             ---0233-----30230368999872589
Q gi|254780846|r  159 ---NNKS-----QIVSSSNIRTALTKGHV  179 (324)
Q Consensus       159 ---~~~~-----~~ISSt~IR~~l~~Gdi  179 (324)
                         +..+     ..||.|.||++|.+|..
T Consensus       168 ~~~c~~~~~~~~~~ISGT~iR~~L~~G~~  196 (214)
T d1v47a2         168 ERTCPEGHREKRTAISMTKVRALLREGKA  196 (214)
T ss_dssp             TTTSCGGGGGGCEECCHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCCCEECCHHHHHHHHHCCCC
T ss_conf             35578877644455078999999987599


No 25 
>d1h5ya_ c.1.2.1 (A:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=51.45  E-value=5  Score=18.05  Aligned_cols=81  Identities=11%  Similarity=0.160  Sum_probs=43.0

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCC----------CC--CHHH
Q ss_conf             00078999988511310002256405775228302688862142780299983455303377----------55--6024
Q gi|254780846|r   72 LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR----------AG--DRGI  139 (324)
Q Consensus        72 l~~~~~k~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r----------~G--d~~~  139 (324)
                      +.+.++-..++ +.|++.+++-.    .+-.+| +|+++ +.+.++.+.++++-|++.+.+.          ..  +...
T Consensus        85 Ir~~e~~~~ll-~~G~~kVii~s----~~~~~~-~~~~~-~~~~~G~q~iv~slD~~~~~~~~~v~~~~~~~~~~~~~~~  157 (252)
T d1h5ya_          85 VRSLEDATTLF-RAGADKVSVNT----AAVRNP-QLVAL-LAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVK  157 (252)
T ss_dssp             CCSHHHHHHHH-HHTCSEEEESH----HHHHCT-HHHHH-HHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHH
T ss_pred             CCHHHHHHHHH-HCCCCEEEECC----CCCCCC-CHHHH-HHHHCCCCCEEEEEEEEECCCCEEEEEECCEECCCCCHHH
T ss_conf             21145556675-24880798345----445796-16789-9986287858999999976993799996996868988999


Q ss_pred             HHHHHHCCCCEEEECCHHHC
Q ss_conf             67751012641676152230
Q gi|254780846|r  140 LQKRGEKYGFHTVFIDELRN  159 (324)
Q Consensus       140 L~~~~~~~g~~v~~i~~~~~  159 (324)
                      +.+...++|+.-.++-.+-.
T Consensus       158 ~~~~~~~~g~~eii~tdI~~  177 (252)
T d1h5ya_         158 WAKEVEELGAGEILLTSIDR  177 (252)
T ss_dssp             HHHHHHHHTCSEEEEEETTT
T ss_pred             HHHHHHHCCCCEEEEEEECC
T ss_conf             99999856999899972545


No 26 
>d2cbia2 c.1.8.10 (A:179-495) Hyaluronidase catalytic domain {Clostridium perfringens [TaxId: 1502]}
Probab=48.32  E-value=5.5  Score=17.78  Aligned_cols=229  Identities=11%  Similarity=0.052  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHCCCCE-EEEEECCCHHHHHCCC--CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHH---H
Q ss_conf             999999995027977-9998379868984788--866200007899998851131000225640577522830268---8
Q gi|254780846|r   36 LILEQAIKIANNSPI-TVLSFNPHPRTIIQSS--SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI---Q  109 (324)
Q Consensus        36 ~Li~~~~~~a~~~~~-~viTF~p~P~~~~~~~--~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi---~  109 (324)
                      +-++..++.|+..+. .++..  ||-.=+.-.  ....-+..+..|++.|.++|+..+ .+-|| ++....+..-.   .
T Consensus        59 ~~~~~l~~~a~~~~v~fv~~i--sPGl~~~~~~~~~~~d~~~L~~K~~ql~~~Gvr~f-aIlfD-DI~~~~~~~~a~~~n  134 (317)
T d2cbia2          59 QRMQELINASAENKVDFVFGI--SPGIDIRFDGDAGEEDFNHLITKAESLYDMGVRSF-AIYWD-DIQDKSAAKHAQVLN  134 (317)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEE--CGGGTCCCSHHHHHHHHHHHHHHHHHHHTTTCCEE-EEECT-TCSSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEE--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE-EEECC-CCCCCCHHHHHHHHH
T ss_conf             999999999997498389996--89976666641149999999999999997698879-98514-455522599999999


Q ss_pred             HH----HCCCCC-EEEEEECCCCCCCC--CCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             86----214278-02999834553033--775560246775101264167615223023330230368999872589999
Q gi|254780846|r  110 KV----LVEWLE-VKTVITGTKFRFGK--DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA  182 (324)
Q Consensus       110 ~i----L~~~l~-~k~ivVG~Df~FG~--~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~a  182 (324)
                      .+    ...... ...++|-..|.-.-  ....+.+.|+.+++...=++.+.   -+ +..+||++.     ...+++.+
T Consensus       135 ~~~~~~~~~~~~~~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~~~i~if---WT-G~~VVs~~i-----s~~~~~~~  205 (317)
T d2cbia2         135 RFNEEFVKAKGDVKPLITVPTEYDTGAMVSNGQPRAYTRIFAETVDPSIEVM---WT-GPGVVTNEI-----PLSDAQLI  205 (317)
T ss_dssp             HHHHHTHHHHSSCCCCEEECSCCSHHHHEETTEECHHHHHHHHHSCTTSEEE---EC-SSSSSCSCB-----CHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEE---EC-CCCCCCCCC-----CHHHHHHH
T ss_conf             9999999854888870786853155423478874899999997489888489---63-797427858-----99999998


Q ss_pred             HHHHHHCCHHHHHHHHCCCCCCEEEEEEEEEEHHCCCCC--CHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEE
Q ss_conf             985000000000122100201101111121100002223--101100024763056562110578997267797149999
Q gi|254780846|r  183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES  260 (324)
Q Consensus       183 n~lLGr~y~i~G~Vv~G~~~Gr~lGfPTaNi~~~~~~~p--~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~  260 (324)
                      .+.++|+-.|=                 -|..+++++..  --|-|..+    +....+.+.-+..||+-.... -.+- 
T Consensus       206 ~~~~~r~~~iW-----------------DNypvNDy~~~rL~lGp~~gr----~~~l~~~~~G~~~NPm~q~e~-ski~-  262 (317)
T d2cbia2         206 SGIYNRNMAVW-----------------WNYPVTDYFKGKLALGPMHGL----DKGLNQYVDFFTVNPMEHAEL-SKIS-  262 (317)
T ss_dssp             HHHHTSCEEEE-----------------ECCSCCTTSTTSCCCCCCCSB----CTTGGGTEEEEEECCCSCHHH-HHHH-
T ss_pred             HHCCCCCCEEE-----------------ECCCCCCCCCCCEEECCCCCC----CCCHHCCCCEEEECCCCCCCC-CHHH-
T ss_conf             74026897379-----------------692226788786666675687----832000251799888674001-4899-


Q ss_pred             EEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHH---HHHHHHHHHHHHHCCC
Q ss_conf             94067855189889999460000887468989999999---9979999999874487
Q gi|254780846|r  261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM---GEDEKKARKILESSYP  314 (324)
Q Consensus       261 hildf~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI---~~D~~~a~~~l~~~~~  314 (324)
                              |+      .+-+|.+.-..|+--+...+.+   ..+...+-..|+.+..
T Consensus       263 --------l~------t~a~y~wn~~~yd~~~sw~~a~~~l~~~~~~~~~~fa~~~s  305 (317)
T d2cbia2         263 --------IH------TAADYSWNMDNYDYDKAWNRAIDMLYGDLAEDMKVFANHST  305 (317)
T ss_dssp             --------HH------HHHHHHHSCTTCCHHHHHHHHHHHHHGGGHHHHHHHHTTSC
T ss_pred             --------HH------HHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC
T ss_conf             --------99------99998628423797899999999878430999999997436


No 27 
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]}
Probab=48.18  E-value=2.5  Score=19.95  Aligned_cols=27  Identities=22%  Similarity=0.285  Sum_probs=18.5

Q ss_pred             CHHHHHHHHHHHHHHCCCCE-EEEEECC
Q ss_conf             28999999999995027977-9998379
Q gi|254780846|r   31 HLGHHLILEQAIKIANNSPI-TVLSFNP   57 (324)
Q Consensus        31 H~GHq~Li~~~~~~a~~~~~-~viTF~p   57 (324)
                      +.|..+=++++++.|+..+. +++.+.+
T Consensus        65 ~~Gt~~d~~~lv~~~h~~gi~VilD~V~   92 (391)
T d1lwha2          65 EYGSEREFKEMIEAFHDSGIKVVLDLPI   92 (391)
T ss_dssp             GGCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred             CCCCHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf             2399999999999997359878443310


No 28 
>d1p5dx1 c.84.1.1 (X:9-154) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=46.17  E-value=4.6  Score=18.29  Aligned_cols=68  Identities=16%  Similarity=0.127  Sum_probs=39.5

Q ss_pred             HHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf             885113100022564057752283026888621427802999834553033775560246775101264167
Q gi|254780846|r   81 ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV  152 (324)
Q Consensus        81 ~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~  152 (324)
                      +++.++|=.++--+||++++..=+..|...+..+  +.+.|+||.|-|+....-  ...+.+--...|++|.
T Consensus         5 if~~~dIRGi~~~~lt~~~~~~ig~a~~~~~~~~--~~~~VvIg~D~R~ss~~~--~~~~~~gl~~~G~~V~   72 (146)
T d1p5dx1           5 IFRAYDIRGVVGDTLTAETAYWIGRAIGSESLAR--GEPCVAVGRDGRLSGPEL--VKQLIQGLVDCGCQVS   72 (146)
T ss_dssp             GBCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHT--TCCEEEEEECSCTTHHHH--HHHHHHHHHTBTCEEE
T ss_pred             HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHH--HHHHHEEECCCCEEEE
T ss_conf             6653577025799969999999999999998755--998899997786440166--6532206505764887


No 29 
>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]}
Probab=44.16  E-value=9.1  Score=16.35  Aligned_cols=14  Identities=14%  Similarity=0.083  Sum_probs=9.5

Q ss_pred             HHHHCCHHHHHHHH
Q ss_conf             50000000001221
Q gi|254780846|r  185 LLGYRFTIESDVIH  198 (324)
Q Consensus       185 lLGr~y~i~G~Vv~  198 (324)
                      .+|-.|..-|.|-.
T Consensus       117 ~~g~DYi~~gpvf~  130 (206)
T d1xi3a_         117 KKGADYLGAGSVFP  130 (206)
T ss_dssp             HHTCSEEEEECSSC
T ss_pred             HCCCCEEEECCCCC
T ss_conf             66988798522334


No 30 
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=42.96  E-value=9.6  Score=16.19  Aligned_cols=25  Identities=12%  Similarity=-0.012  Sum_probs=16.6

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf             0007899998851131000225640
Q gi|254780846|r   72 LSPPSIQEKILEKMGFSALIRYKFT   96 (324)
Q Consensus        72 l~~~~~k~~~l~~~Gid~vi~~~F~   96 (324)
                      .....+|+..|+++||+.|.+.|+.
T Consensus        22 ~~~i~~kLdyLk~LGvt~I~l~Pi~   46 (390)
T d1ud2a2          22 WNRLHDDAAALSDAGITAIWIPPAY   46 (390)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             9999997999997699889969780


No 31 
>d1thfd_ c.1.2.1 (D:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]}
Probab=40.79  E-value=10  Score=15.97  Aligned_cols=22  Identities=9%  Similarity=0.285  Sum_probs=8.9

Q ss_pred             HHHHHHHCCCCCEEEEEECCCCC
Q ss_conf             26888621427802999834553
Q gi|254780846|r  106 QFIQKVLVEWLEVKTVITGTKFR  128 (324)
Q Consensus       106 ~Fi~~iL~~~l~~k~ivVG~Df~  128 (324)
                      +|++++ .+.++.+.+++.-|++
T Consensus       111 ~~l~~~-~~~~G~~~iv~~id~~  132 (253)
T d1thfd_         111 SLITQI-AQTFGSQAVVVAIDAK  132 (253)
T ss_dssp             HHHHHH-HHHHCGGGEEEEEEEE
T ss_pred             HHHHHH-HHHCCCEEEEEEEEEC
T ss_conf             999989-9980981499755310


No 32 
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=35.45  E-value=13  Score=15.44  Aligned_cols=20  Identities=25%  Similarity=0.255  Sum_probs=14.9

Q ss_pred             CHHHHHHHHHHHHHHCCCCE
Q ss_conf             28999999999995027977
Q gi|254780846|r   31 HLGHHLILEQAIKIANNSPI   50 (324)
Q Consensus        31 H~GHq~Li~~~~~~a~~~~~   50 (324)
                      |.|-.+-++.+++.|+..+.
T Consensus        82 ~~Gt~~d~~~LV~~aH~~Gi  101 (361)
T d1mxga2          82 RFGSKEELVRLIQTAHAYGI  101 (361)
T ss_dssp             SSCCHHHHHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHHHHHHCCC
T ss_conf             88999999999999997799


No 33 
>d2gtia2 d.294.1.2 (A:217-369) Nsp15, C-terminal domain {Murine hepatitis virus, MHV [TaxId: 11138]}
Probab=34.35  E-value=2.9  Score=19.53  Aligned_cols=61  Identities=15%  Similarity=0.189  Sum_probs=41.5

Q ss_pred             CCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHH
Q ss_conf             6405775228302688862142780299983455303377556024677510126416761522
Q gi|254780846|r   94 KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL  157 (324)
Q Consensus        94 ~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~  157 (324)
                      +..++|-+|+.++||.++=.+.++..+|+-|+.-+   .--|+...|..+-+..-.....++++
T Consensus        20 ~mE~DFL~m~~~~Fi~kY~l~d~~~eHivyGd~sk---~tiGGlHllIs~~r~~~~~~l~~~~~   80 (153)
T d2gtia2          20 EMEKDFMDLDDDVFIAKYSLQDYAFEHVVYGSFNQ---KIIGGLHLLIGLARRQQKSNLVIQEF   80 (153)
T ss_dssp             HHHHHHHHSCHHHHHHHTTCGGGCHHHHTTCBCSS---SBCBCCCBHHHHHHHTTTSCEEEEES
T ss_pred             HHHHHHHHHCHHHHHHHCCCCCCCCCEEEEECCCC---CCCCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf             77798873067899987383114763699944588---83052266999998763233014401


No 34 
>d3c8ya1 c.96.1.1 (A:210-574) Fe-only hydrogenase, catalytic domain {Clostridium pasteurianum [TaxId: 1501]}
Probab=30.16  E-value=15  Score=14.88  Aligned_cols=67  Identities=13%  Similarity=0.221  Sum_probs=37.4

Q ss_pred             HCCCCEEEEEECCCHHHHHCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCCCCHHHHHH-CCCHHHHHHH
Q ss_conf             027977999837986898478886620-000789999885113100022564057752-2830268886
Q gi|254780846|r   45 ANNSPITVLSFNPHPRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETAN-YSAEQFIQKV  111 (324)
Q Consensus        45 a~~~~~~viTF~p~P~~~~~~~~~~~~-l~~~~~k~~~l~~~Gid~vi~~~F~~~~a~-ls~e~Fi~~i  111 (324)
                      +++.+.+|++..|.-+.-+...-.... ..+..+=...|+++|+++|+...|-.++.- -++.+|++.+
T Consensus        10 ~~~~k~vV~siaP~~r~sla~~f~l~~~~~~~~kl~~~lk~LGF~~V~dt~~gad~~~~e~~~E~~~r~   78 (365)
T d3c8ya1          10 NAPEKHVIVAMAPSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRI   78 (365)
T ss_dssp             HCTTCEEEEEECGGGGGTGGGGGTCCSSCCCHHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             HCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHH
T ss_conf             689958999989278999999848994300289999999986999999837888999999999999998


No 35 
>d2tpsa_ c.1.3.1 (A:) Thiamin phosphate synthase {Bacillus subtilis [TaxId: 1423]}
Probab=25.72  E-value=18  Score=14.38  Aligned_cols=15  Identities=13%  Similarity=0.096  Sum_probs=9.3

Q ss_pred             HHHHHHHHCCHHHHHH
Q ss_conf             9998500000000012
Q gi|254780846|r  181 NAAHLLGYRFTIESDV  196 (324)
Q Consensus       181 ~an~lLGr~y~i~G~V  196 (324)
                      .|.+ +|-.|-.-|.|
T Consensus       130 ~a~~-~g~DYi~~gpv  144 (226)
T d2tpsa_         130 QAEE-DGADYVGLGPI  144 (226)
T ss_dssp             HHHH-HTCSEEEECCS
T ss_pred             HHHH-CCCCEEEEECC
T ss_conf             9885-76776988402


No 36 
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]}
Probab=25.53  E-value=18  Score=14.36  Aligned_cols=19  Identities=21%  Similarity=0.223  Sum_probs=10.5

Q ss_pred             CHHHHHHHHHHHHHHCCCC
Q ss_conf             2899999999999502797
Q gi|254780846|r   31 HLGHHLILEQAIKIANNSP   49 (324)
Q Consensus        31 H~GHq~Li~~~~~~a~~~~   49 (324)
                      ++|-.+=++++++.|+..+
T Consensus        74 ~~Gt~~df~~Lv~~~H~~G   92 (393)
T d1e43a2          74 KYGTKSELQDAIGSLHSRN   92 (393)
T ss_dssp             SSCCHHHHHHHHHHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHCC
T ss_conf             8999999999999999869


No 37 
>d2h85a2 d.294.1.2 (A:191-345) Nsp15, C-terminal domain {SARS coronavirus [TaxId: 227859]}
Probab=24.66  E-value=3.9  Score=18.72  Aligned_cols=49  Identities=14%  Similarity=0.236  Sum_probs=36.8

Q ss_pred             CCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf             2564057752283026888621427802999834553033775560246775
Q gi|254780846|r   92 RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR  143 (324)
Q Consensus        92 ~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~  143 (324)
                      .-++.++|-+|+.++||+++=.+.++..+|+-|+.-+   .--|+...|..+
T Consensus        16 rs~me~DFL~~d~~~Fi~ky~led~~~eHi~yGd~s~---~~iGGlH~lis~   64 (155)
T d2h85a2          16 RSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDFSH---GQLGGLHLMIGL   64 (155)
T ss_dssp             CSHHHHHHHHSCHHHHHHHTTCTTSCHHHHTTCBCSS---SBCBCCCBHHHH
T ss_pred             CCHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEECCCC---CCCCCHHHHHHH
T ss_conf             7533366663086999987282003775699943588---831630558889


No 38 
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.46  E-value=19  Score=14.23  Aligned_cols=52  Identities=12%  Similarity=0.085  Sum_probs=34.8

Q ss_pred             HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCH
Q ss_conf             0268886214278029998345530337755602467751012641676152
Q gi|254780846|r  105 EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE  156 (324)
Q Consensus       105 e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~  156 (324)
                      +..++++....-++..++||.-.=.-..|.-..+..+++++++++....+..
T Consensus        94 ~~~~~~i~~~~~~~~iilVgnK~Dl~~~~~v~~~~~~~~~~~~~~~~~e~Sa  145 (164)
T d1z2aa1          94 SSWREKVVAEVGDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSV  145 (164)
T ss_dssp             HHHHHHHHHHHCSCCEEEEEECGGGGGGCSSCHHHHHHHHHHHTCEEEECBT
T ss_pred             CCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHCCCEEEEECC
T ss_conf             2343322223898327776325775344456402667799875987999606


No 39 
>d1ex2a_ c.51.4.2 (A:) Maf protein {Bacillus subtilis [TaxId: 1423]}
Probab=24.32  E-value=11  Score=15.70  Aligned_cols=39  Identities=18%  Similarity=0.230  Sum_probs=25.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCC-CCCHHHH-HHCCCHHHHHHH
Q ss_conf             00789999885113100022-5640577-522830268886
Q gi|254780846|r   73 SPPSIQEKILEKMGFSALIR-YKFTLET-ANYSAEQFIQKV  111 (324)
Q Consensus        73 ~~~~~k~~~l~~~Gid~vi~-~~F~~~~-a~ls~e~Fi~~i  111 (324)
                      +.-..|.++|+++|+++.+. .+|++.. ...+|.+++..+
T Consensus         9 S~SprR~~lL~~~gi~f~v~~~~idE~~~~~~~p~~~v~~l   49 (185)
T d1ex2a_           9 SQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWL   49 (185)
T ss_dssp             CCCHHHHHHHHTTCCCCEECCCCCCCCCCTTSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf             78999999998689998997999887767799979999999


No 40 
>d1ka9f_ c.1.2.1 (F:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]}
Probab=23.54  E-value=20  Score=14.11  Aligned_cols=18  Identities=11%  Similarity=0.313  Sum_probs=7.7

Q ss_pred             HHHHHHCCCCCCCCCCCH
Q ss_conf             998851131000225640
Q gi|254780846|r   79 EKILEKMGFSALIRYKFT   96 (324)
Q Consensus        79 ~~~l~~~Gid~vi~~~F~   96 (324)
                      .+.+.+.|+|.+++++.+
T Consensus        36 a~~~~~~g~dei~iiDl~   53 (251)
T d1ka9f_          36 ARAYDEAGADELVFLDIS   53 (251)
T ss_dssp             HHHHHHHTCSCEEEEECC
T ss_pred             HHHHHHCCCCEEEEEECC
T ss_conf             999998699989998444


No 41 
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=22.25  E-value=21  Score=13.95  Aligned_cols=91  Identities=11%  Similarity=0.129  Sum_probs=50.8

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCHHHHHH-------------CCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHH
Q ss_conf             000789999885113100022564057752-------------2830268886214278029998345530337755602
Q gi|254780846|r   72 LSPPSIQEKILEKMGFSALIRYKFTLETAN-------------YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG  138 (324)
Q Consensus        72 l~~~~~k~~~l~~~Gid~vi~~~F~~~~a~-------------ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~  138 (324)
                      +.+.+ ..+...+.|.++++..-|++++.+             ++|.+...-+   ..+++.+-+     |=.+..|...
T Consensus        73 V~~~~-~~~~a~~aGa~FivSP~~~~~v~~~a~~~~i~~iPGv~TpsEi~~A~---~~G~~~vK~-----FPA~~~gG~~  143 (212)
T d1vhca_          73 VLTAE-QVVLAKSSGADFVVTPGLNPKIVKLCQDLNFPITPGVNNPMAIEIAL---EMGISAVKF-----FPAEASGGVK  143 (212)
T ss_dssp             CCSHH-HHHHHHHHTCSEEECSSCCHHHHHHHHHTTCCEECEECSHHHHHHHH---HTTCCEEEE-----TTTTTTTHHH
T ss_pred             CCCHH-HHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH---HCCCCEEEE-----CCCCCCCHHH
T ss_conf             46589-99999861786897788879999999855997168868889999999---879997997-----5543222489


Q ss_pred             HHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf             4677510126416761522302333023036899987258
Q gi|254780846|r  139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH  178 (324)
Q Consensus       139 ~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd  178 (324)
                      +|+.+...+. .+..++   . +|  ||..+++++|+.|.
T Consensus       144 ~lkal~~p~p-~~~~~p---t-GG--V~~~N~~~yl~~g~  176 (212)
T d1vhca_         144 MIKALLGPYA-QLQIMP---T-GG--IGLHNIRDYLAIPN  176 (212)
T ss_dssp             HHHHHHTTTT-TCEEEE---B-SS--CCTTTHHHHHTSTT
T ss_pred             HHHHHHCCCC-CCEEEE---C-CC--CCHHHHHHHHHCCC
T ss_conf             9998756134-872885---3-89--88888999993899


No 42 
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]}
Probab=22.13  E-value=21  Score=13.94  Aligned_cols=17  Identities=18%  Similarity=0.196  Sum_probs=7.4

Q ss_pred             HHHHHHHHHHHHHHCCC
Q ss_conf             89999999999950279
Q gi|254780846|r   32 LGHHLILEQAIKIANNS   48 (324)
Q Consensus        32 ~GHq~Li~~~~~~a~~~   48 (324)
                      .|=.+-++++++.|+..
T Consensus        65 ~G~~~~f~~lv~~~H~~   81 (347)
T d1ht6a2          65 YGNAAELKSLIGALHGK   81 (347)
T ss_dssp             TCCHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHC
T ss_conf             78999999999997244


No 43 
>d2nqra3 c.57.1.2 (A:178-326) MoeA, central domain {Escherichia coli [TaxId: 562]}
Probab=20.71  E-value=19  Score=14.24  Aligned_cols=32  Identities=16%  Similarity=0.174  Sum_probs=21.4

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECCHHHCC
Q ss_conf             03377556024677510126416761522302
Q gi|254780846|r  129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNN  160 (324)
Q Consensus       129 FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~  160 (324)
                      =|.-+..|...|..+++++|+++.....+.++
T Consensus        21 ~g~i~dsN~~~l~~~l~~~G~~v~~~~~v~Dd   52 (149)
T d2nqra3          21 DGQIYDTNRLAVHLMLEQLGCEVINLGIIRDD   52 (149)
T ss_dssp             TTCEECCHHHHHHHHHHHTTCEEEEEEEECSS
T ss_pred             CCCEEECCHHHHHHHHHHCCEEEEECCCCCCH
T ss_conf             99586264688886453322599991410874


Done!