Query gi|254780846|ref|YP_003065259.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 324 No_of_seqs 148 out of 2493 Neff 6.2 Searched_HMMs 13730 Date Wed Jun 1 10:23:45 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780846.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1mrza2 c.26.1.3 (A:2-158) FMN 100.0 3.5E-44 0 305.2 11.2 155 21-188 1-157 (157) 2 d1n08a_ b.43.5.1 (A:) Riboflav 100.0 2.6E-43 0 299.6 7.5 130 188-319 14-149 (154) 3 d1mrza1 b.43.5.1 (A:159-288) R 100.0 3.5E-43 0 298.7 6.0 124 189-312 1-126 (130) 4 d1nb9a_ b.43.5.1 (A:) Riboflav 100.0 1.8E-42 0 294.2 6.8 130 189-319 4-139 (147) 5 d1coza_ c.26.1.2 (A:) CTP:glyc 99.3 3.5E-12 2.5E-16 97.1 7.7 123 20-174 3-126 (126) 6 d1lw7a1 c.26.1.3 (A:57-219) Tr 99.2 9.6E-13 7E-17 100.8 2.8 151 18-175 2-155 (163) 7 d1f9aa_ c.26.1.3 (A:) Nicotina 99.2 1.9E-11 1.4E-15 92.3 6.6 135 21-178 3-137 (164) 8 d1ej2a_ c.26.1.3 (A:) Nicotina 98.9 5.7E-10 4.1E-14 82.7 4.9 132 21-178 3-140 (167) 9 d1v8fa_ c.26.1.4 (A:) Pantothe 98.8 9.1E-09 6.6E-13 74.9 7.3 168 1-185 1-198 (276) 10 d1ihoa_ c.26.1.4 (A:) Pantothe 98.6 4E-08 2.9E-12 70.7 5.3 168 1-185 1-204 (282) 11 d1jhda2 c.26.1.5 (A:174-396) A 98.6 5.2E-07 3.8E-11 63.5 10.9 165 19-190 20-218 (223) 12 d2a84a1 c.26.1.4 (A:3-288) Pan 98.5 4.8E-08 3.5E-12 70.2 5.1 169 1-185 9-211 (286) 13 d1kama_ c.26.1.3 (A:) Nicotina 98.5 8.4E-07 6.1E-11 62.1 11.0 147 21-178 5-167 (189) 14 d1nuua_ c.26.1.3 (A:) Cytosoli 98.4 8.3E-07 6.1E-11 62.1 8.1 70 21-95 7-81 (233) 15 d1kr2a_ c.26.1.3 (A:) Nicotina 98.3 2.3E-06 1.7E-10 59.2 8.5 69 22-95 8-81 (271) 16 d1tfua_ c.26.1.3 (A:) Phosphop 98.2 2.9E-06 2.1E-10 58.6 7.0 37 20-59 3-39 (157) 17 d1o6ba_ c.26.1.3 (A:) Phosphop 98.1 5.9E-06 4.3E-10 56.6 8.0 133 21-178 4-139 (163) 18 d1od6a_ c.26.1.3 (A:) Phosphop 98.1 6.1E-06 4.5E-10 56.5 7.4 26 21-46 3-28 (160) 19 d1k4ma_ c.26.1.3 (A:) Nicotina 98.0 2E-05 1.5E-09 53.1 9.4 34 24-57 9-43 (213) 20 d1qjca_ c.26.1.3 (A:) Phosphop 97.9 3.2E-06 2.4E-10 58.3 3.8 27 20-46 2-28 (157) 21 d1vlha_ c.26.1.3 (A:) Phosphop 97.8 2.2E-05 1.6E-09 52.8 6.4 25 21-45 3-27 (157) 22 d1x6va2 c.26.1.5 (A:390-624) A 97.6 0.0004 2.9E-08 44.7 10.4 151 19-179 24-211 (235) 23 d1g8fa2 c.26.1.5 (A:169-389) A 97.4 0.00054 3.9E-08 43.8 8.8 150 19-178 21-201 (221) 24 d1v47a2 c.26.1.5 (A:136-349) A 96.9 0.017 1.2E-06 34.1 12.5 148 19-179 21-196 (214) 25 d1h5ya_ c.1.2.1 (A:) Cyclase s 51.4 5 0.00036 18.1 2.7 81 72-159 85-177 (252) 26 d2cbia2 c.1.8.10 (A:179-495) H 48.3 5.5 0.0004 17.8 2.5 229 36-314 59-305 (317) 27 d1lwha2 c.1.8.1 (A:1-391) 4-al 48.2 2.5 0.00018 20.0 0.8 27 31-57 65-92 (391) 28 d1p5dx1 c.84.1.1 (X:9-154) Pho 46.2 4.6 0.00033 18.3 1.9 68 81-152 5-72 (146) 29 d1xi3a_ c.1.3.1 (A:) Thiamin p 44.2 9.1 0.00066 16.3 3.1 14 185-198 117-130 (206) 30 d1ud2a2 c.1.8.1 (A:1-390) Bact 43.0 9.6 0.0007 16.2 3.5 25 72-96 22-46 (390) 31 d1thfd_ c.1.2.1 (D:) Cyclase s 40.8 10 0.00076 16.0 3.7 22 106-128 111-132 (253) 32 d1mxga2 c.1.8.1 (A:1-361) Bact 35.5 13 0.00091 15.4 3.6 20 31-50 82-101 (361) 33 d2gtia2 d.294.1.2 (A:217-369) 34.3 2.9 0.00021 19.5 -0.6 61 94-157 20-80 (153) 34 d3c8ya1 c.96.1.1 (A:210-574) F 30.2 15 0.0011 14.9 4.0 67 45-111 10-78 (365) 35 d2tpsa_ c.1.3.1 (A:) Thiamin p 25.7 18 0.0013 14.4 4.6 15 181-196 130-144 (226) 36 d1e43a2 c.1.8.1 (A:1-393) Bact 25.5 18 0.0013 14.4 3.5 19 31-49 74-92 (393) 37 d2h85a2 d.294.1.2 (A:191-345) 24.7 3.9 0.00029 18.7 -1.4 49 92-143 16-64 (155) 38 d1z2aa1 c.37.1.8 (A:8-171) Rab 24.5 19 0.0014 14.2 4.7 52 105-156 94-145 (164) 39 d1ex2a_ c.51.4.2 (A:) Maf prot 24.3 11 0.00083 15.7 0.9 39 73-111 9-49 (185) 40 d1ka9f_ c.1.2.1 (F:) Cyclase s 23.5 20 0.0015 14.1 2.2 18 79-96 36-53 (251) 41 d1vhca_ c.1.10.1 (A:) Hypothet 22.2 21 0.0015 14.0 5.4 91 72-178 73-176 (212) 42 d1ht6a2 c.1.8.1 (A:1-347) Plan 22.1 21 0.0016 13.9 3.0 17 32-48 65-81 (347) 43 d2nqra3 c.57.1.2 (A:178-326) M 20.7 19 0.0014 14.2 1.5 32 129-160 21-52 (149) No 1 >d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Probab=100.00 E-value=3.5e-44 Score=305.22 Aligned_cols=155 Identities=28% Similarity=0.468 Sum_probs=137.2 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH Q ss_conf 99993156502899999999999502--7977999837986898478886620000789999885113100022564057 Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLE 98 (324) Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~--~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~ 98 (324) |+|||+|||+|+|||+||+++++.|+ +.+++|+||+|||..+ .++.+ ..+++.++|.++|+++|++ ++++|+ + T Consensus 1 VvtiG~FDGvH~GHq~li~~~~~~a~~~~~~~~v~tf~~~p~~~-~~~~~-~~l~~~~~k~~~l~~~g~~--~~l~f~-~ 75 (157) T d1mrza2 1 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYF-LPDFP-GLLMTVESRVEMLSRYART--VVLDFF-R 75 (157) T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGG-STTCC-CBSSCHHHHHHHHTTTSCE--EEECHH-H T ss_pred CEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHE-EECCC-CCCCCHHHHHHHHHCCCCE--EEEHHH-H T ss_conf 98997261045899999999999999729985676427882314-74166-5444477765554303430--221256-6 Q ss_pred HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH Q ss_conf 75228302688862142780299983455303377556024677510126416761522302333023036899987258 Q gi|254780846|r 99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178 (324) Q Consensus 99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd 178 (324) +++|||++|++++|. +++.||||+||+||++|+||+++|++ +|+++.+++++.. ++++||||+||++|.+|| T Consensus 76 ~~~ls~~~Fi~~~l~---~~~~ivvG~Df~FG~~r~G~~~~Lk~----~g~~v~~i~~~~~-~~~~ISST~IR~~l~~G~ 147 (157) T d1mrza2 76 IKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNASGNASFLRK----KGVEVYEIEDVVV-QGKRVSSSLIRNLVQEGR 147 (157) T ss_dssp HTTCCHHHHHHHHCT---TCCEEEEETTCCBSGGGCBCHHHHHH----TTCEEEEECCCEE-TTEECCHHHHHHHHHTTC T ss_pred HHHHHHHHHHHHHHH---CCCEEEEECCCCCCCCCCCCHHHHCC----CEEEEEEECCEEE-CCCEECHHHHHHHHHCCC T ss_conf 765406678998863---27389995574004444555455325----2058996145851-991895999999998499 Q ss_pred HHHHHHHHHH Q ss_conf 9999985000 Q gi|254780846|r 179 VLNAAHLLGY 188 (324) Q Consensus 179 i~~an~lLGr 188 (324) |+.||+|||| T Consensus 148 i~~A~~lLGR 157 (157) T d1mrza2 148 VEEIPAYLGR 157 (157) T ss_dssp TTTTHHHHSS T ss_pred HHHHHHHCCC T ss_conf 9999985399 No 2 >d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Probab=100.00 E-value=2.6e-43 Score=299.55 Aligned_cols=130 Identities=24% Similarity=0.339 Sum_probs=116.1 Q ss_pred HCCHHHHHHHHCCCCC-CEEEEEEEEEEHHCC-C---CCCHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEE Q ss_conf 0000000122100201-101111121100002-2---2310110002476305656211057899726779714999994 Q gi|254780846|r 188 YRFTIESDVIHGEKIG-RTLGFPTANMQLSPD-I---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI 262 (324) Q Consensus 188 r~y~i~G~Vv~G~~~G-r~lGfPTaNi~~~~~-~---~p~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hi 262 (324) +||+++|+|+||++|| |+||||||||.++.. . .|+.|||++++.+ ++.+|+||+|||.||||++ ...++|+|| T Consensus 14 yPy~i~G~Vv~G~~~G~R~LGfPTANl~~~~~~~l~~~P~~GVYa~~v~i-~~~~y~~v~niG~rPTf~~-~~~~~Evhi 91 (154) T d1n08a_ 14 YPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMV-QKRVFPMVMSVGWNPYYKN-KLRSAEVHL 91 (154) T ss_dssp CCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTSCSEEEEEEEEE-TTEEEEEEEEEEECTTCSS-CCEEEEEEE T ss_pred CCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEE-ECEEEEEEEEECCCHHCCC-CCCEEEEEE T ss_conf 88899999982895587655707862007513443235654327889864-0115777776536311044-563588898 Q ss_pred ECCCC-CCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC Q ss_conf 06785-5189889999460000887468989999999997999999987448721134 Q gi|254780846|r 263 FDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319 (324) Q Consensus 263 ldf~~-dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~~~~~~~d 319 (324) |||++ ||||+.|+|+|++|||+|+||+|+|+|++||++|++.||++|+.......+. T Consensus 92 ldf~~~dlYg~~i~V~~~~~iR~e~kF~s~e~L~~qI~~D~~~ar~~L~~~~~~~~~~ 149 (154) T d1n08a_ 92 IERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKK 149 (154) T ss_dssp TTCCSCCCTTCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHTSHHHHGGGG T ss_pred ECCCCHHHCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCC T ss_conf 3242221257899999814336984539999999999999999999986815776420 No 3 >d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Probab=100.00 E-value=3.5e-43 Score=298.70 Aligned_cols=124 Identities=37% Similarity=0.638 Sum_probs=115.6 Q ss_pred CCHHHHHHHHCCCCCCEEEEEEEEEEHHCC-CC-CCHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEEECCC Q ss_conf 000000122100201101111121100002-22-3101100024763056562110578997267797149999940678 Q gi|254780846|r 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPD-IL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFS 266 (324) Q Consensus 189 ~y~i~G~Vv~G~~~Gr~lGfPTaNi~~~~~-~~-p~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hildf~ 266 (324) .|+|+|+|+||+++||+||||||||.+++. ++ |+.|||++++.+.++.+|+|++|||.||||+++...++|+||+||+ T Consensus 1 yy~i~G~V~~G~~~Gr~lGfPTANl~~~~~~~~~p~~GVY~~~v~~~~~~~~~~v~~iG~~PTf~~~~~~~~E~hi~df~ 80 (130) T d1mrza1 1 YFEIEGIVHKDREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNVKYEVYILDFE 80 (130) T ss_dssp CCEEEEEC-----------CCCEECBCCSSCBCCCCSEEEEEEEECGGGCEEEEEEEEEEC------CCEEEEEEETTCC T ss_pred CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEECCCC T ss_conf 97999999808856523588778745566541034552668999986122231488998510316666504889971567 Q ss_pred CCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 5518988999946000088746898999999999799999998744 Q gi|254780846|r 267 QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312 (324) Q Consensus 267 ~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~ 312 (324) +||||+.++|+|++|||+|+||+|+|+|++||++|++.||++|++. T Consensus 81 ~dlYg~~i~v~f~~~lR~e~kF~s~~eL~~qI~~Di~~ar~~l~~~ 126 (130) T d1mrza1 81 GDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMIDDI 126 (130) T ss_dssp SCCTTCEEEEEEEEEEECCCC----CCHHHHHHHHHHHHHHHHHHH T ss_pred CCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 5658979999988876798373999999999999999999999876 No 4 >d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]} Probab=100.00 E-value=1.8e-42 Score=294.16 Aligned_cols=130 Identities=28% Similarity=0.405 Sum_probs=117.3 Q ss_pred CCHHHHHHHHCCCCC-CEEEEEEEEEEHHC-CCCC---CHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEEE Q ss_conf 000000122100201-10111112110000-2223---101100024763056562110578997267797149999940 Q gi|254780846|r 189 RFTIESDVIHGEKIG-RTLGFPTANMQLSP-DILL---KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF 263 (324) Q Consensus 189 ~y~i~G~Vv~G~~~G-r~lGfPTaNi~~~~-~~~p---~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~hil 263 (324) ||+++|.|+||+++| |+||||||||.++. ..+| +.|||++++.+.++.+|+||+|||.||||++ ...++|+|+| T Consensus 4 Py~i~G~Vv~G~~~G~r~LGfPTANl~~~~~~~lp~~~~~GVY~~~v~i~~~~~y~gi~niG~rPTf~~-~~~~~E~h~l 82 (147) T d1nb9a_ 4 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKN-TKKSMETHIM 82 (147) T ss_dssp SEEEEEECBCCSSSCGGGGTCCCEECCHHHHHTSCTTSCSEEEEEEEEETTCCCEEEEEEEEECTTSSS-CCEEEEEEES T ss_pred CEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCC-CCCEEEEEEE T ss_conf 889999998589548775372884774755642444345574699999507974310788612200025-5625899982 Q ss_pred -CCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC Q ss_conf -67855189889999460000887468989999999997999999987448721134 Q gi|254780846|r 264 -DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319 (324) Q Consensus 264 -df~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~a~~~l~~~~~~~~~d 319 (324) ||++||||+.++|+|++|||+|+||+|+|+|++||++|++.||++|+....+..++ T Consensus 83 ~dF~~dlYG~~i~V~~~~~iR~e~KF~s~~~L~~qI~~Di~~ar~~l~~~~~~~~~~ 139 (147) T d1nb9a_ 83 HTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKE 139 (147) T ss_dssp SCCSSCCTTSEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHTTSHHHHGGGG T ss_pred CCCCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCC T ss_conf 457875001589999986726984849999999999999999999978814656323 No 5 >d1coza_ c.26.1.2 (A:) CTP:glycerol-3-phosphate cytidylyltransferase {Bacillus subtilis [TaxId: 1423]} Probab=99.30 E-value=3.5e-12 Score=97.11 Aligned_cols=123 Identities=18% Similarity=0.293 Sum_probs=79.9 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCCCHHH Q ss_conf 499993156502899999999999502797799983798689847888662000078999988511-3100022564057 Q gi|254780846|r 20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM-GFSALIRYKFTLE 98 (324) Q Consensus 20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~-Gid~vi~~~F~~~ 98 (324) .|++.|.||++|.||+.+|++|.+.+... .+.++-| +.... .+.+ .+.+.++|...|+++ .+|.++.... T Consensus 3 ~V~~~G~FD~lH~GH~~~l~~Ak~~gd~l-iV~v~sD--~~~~~-~k~~--pi~~~~eR~~~l~~~~~Vd~v~~~~~--- 73 (126) T d1coza_ 3 KVITYGTFDLLHWGHIKLLERAKQLGDYL-VVAISTD--EFNLQ-KQKK--AYHSYEHRKLILETIRYVDEVIPEKN--- 73 (126) T ss_dssp EEEEEECCCSCCHHHHHHHHHHHTTSSEE-EEEEECH--HHHHH-HTCC--CSSCHHHHHHHHTTBTTCCEEEEECC--- T ss_pred EEEEEEEECCCCHHHHHHHHHHHHHCCEE-EEEEECC--CHHHH-CCCC--CCCCHHHHHHHHHHHCCCCEEEECCC--- T ss_conf 99991175889989999999998609552-5554033--01120-1475--65778999987543225661465155--- Q ss_pred HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHH Q ss_conf 7522830268886214278029998345530337755602467751012641676152230233302303689998 Q gi|254780846|r 99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174 (324) Q Consensus 99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l 174 (324) +++....+ ..+++..+++|+||. +....++. +.++..++. . ..+|||.||+.| T Consensus 74 ------~~~~~~~i-~~~~~d~~v~G~D~~------~~~~~~~~-----~~~~i~~~~--~---~~iSST~i~~~I 126 (126) T d1coza_ 74 ------WEQKKQDI-IDHNIDVFVMGDDWE------GKFDFLKD-----QCEVVYLPR--T---EGISTTKIKEEI 126 (126) T ss_dssp ------STTHHHHH-HHTTCSEEEEEGGGT------TTTGGGTT-----TSEEEEECC--C---TTCCHHHHHHTC T ss_pred ------CCCCHHHH-HCCCCCEEEECCCCC------CCHHHHHC-----CCEEEEECC--C---CCCCHHHHHHHC T ss_conf ------31107665-144898766665355------65388873-----988999799--9---984479999749 No 6 >d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]} Probab=99.25 E-value=9.6e-13 Score=100.76 Aligned_cols=151 Identities=13% Similarity=0.058 Sum_probs=81.7 Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC---CCCCC Q ss_conf 884999931565028999999999995027977999837986898478886620000789999885113100---02256 Q gi|254780846|r 18 KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA---LIRYK 94 (324) Q Consensus 18 ~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~---vi~~~ 94 (324) +..++..|+||.+|+||+.|++.+.+.++..-+++.+..+.|.... +......+.+.++|.++++.+..+. ++... T Consensus 2 kkigl~~G~FdP~H~GH~~l~~~a~~~~d~v~v~i~~~~~~~~~~~-~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~ 80 (163) T d1lw7a1 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLF-YDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHH 80 (163) T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHH-HHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEE T ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEE T ss_conf 7699995247989999999999999968944999978998644456-555656789999999999983766784599973 Q ss_pred CHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHH Q ss_conf 40577522830268886214278029998345530337755602467751012641676152230233302303689998 Q gi|254780846|r 95 FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174 (324) Q Consensus 95 F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l 174 (324) +........+..+................+.+..|+.+..+ ...+.+.++.++..++.- ..+..||||.||+.+ T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~ISST~IR~~~ 154 (163) T d1lw7a1 81 LVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD----KAPYEKYLGLEVSLVDPD--RTFFNVSATKIRTTP 154 (163) T ss_dssp EECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG----HHHHHHHTCCEEECCCSS--CCSSCCCHHHHHHCG T ss_pred CCHHCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCHHC----HHHHHHHCCCEEEEEECC--CCCCEECHHHHHHHH T ss_conf 22111413748899999873134359973677899544212----188998649838999628--899847699999989 Q ss_pred H Q ss_conf 7 Q gi|254780846|r 175 T 175 (324) Q Consensus 175 ~ 175 (324) . T Consensus 155 ~ 155 (163) T d1lw7a1 155 F 155 (163) T ss_dssp G T ss_pred H T ss_conf 9 No 7 >d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Probab=99.18 E-value=1.9e-11 Score=92.27 Aligned_cols=135 Identities=13% Similarity=0.109 Sum_probs=73.7 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511310002256405775 Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100 (324) Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a 100 (324) ++..|.||++|+||+.|++++.+.+.. ..|+.-.++ +........+.++|.++++....+.-....+..... T Consensus 3 gl~~G~FdP~H~GH~~li~~a~~~~d~--v~v~i~~~~------~~~~~~~~~s~~~R~~~i~~~~~~~~~~~~~~~~~~ 74 (164) T d1f9aa_ 3 GFIIGRFQPFHKGHLEVIKKIAEEVDE--IIIGIGSAQ------KSHTLENPFTAGERILMITQSLKDYDLTYYPIPIKD 74 (164) T ss_dssp EEEEECCTTCCHHHHHHHHHHTTTCSE--EEEEECSTT------CCSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCC T ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCC--EEEEECCCC------CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC T ss_conf 999615699988999999999996897--499954776------445767778899999999997533476245213354 Q ss_pred HCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH Q ss_conf 228302688862142780299983455303377556024677510126416761522302333023036899987258 Q gi|254780846|r 101 NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178 (324) Q Consensus 101 ~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd 178 (324) ...+..... .+ +.+... .++.|+.+ .....+.+..|+++..++.. ....||||.||+++..|+ T Consensus 75 ~~~~~~~~~-~~-~~~~~~-----~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~---~~~~ISST~IR~~i~~g~ 137 (164) T d1f9aa_ 75 IEFNSIWVS-YV-ESLTPP-----FDIVYSGN-----PLVRVLFEERGYEVKRPEMF---NRKEYSGTEIRRRMLNGE 137 (164) T ss_dssp CSCGGGHHH-HH-HHHSCC-----CSEEECCC-----HHHHHHHHHTTCEEECCCCC---STTTSSHHHHHHHHHHTC T ss_pred CCHHHHHHH-HH-HHHCCC-----EEEEECCH-----HHHHHHHHHCCCEEEEECCC---CCCCCCHHHHHHHHHCCC T ss_conf 320777999-99-752586-----69998284-----99999988269828981476---777767899999999599 No 8 >d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Probab=98.91 E-value=5.7e-10 Score=82.74 Aligned_cols=132 Identities=13% Similarity=0.139 Sum_probs=70.6 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC----CCCCCCCCCCH Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511----31000225640 Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM----GFSALIRYKFT 96 (324) Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~----Gid~vi~~~F~ 96 (324) ++..|.||.+|.||+.+++++.+.+... .+.++..+.| +.+ ..+.+.++|.++++.. +++........ T Consensus 3 gi~~G~FdP~H~GH~~ii~~a~~~~d~v-~v~i~~~~~~-----~~~--~~~~~~~~R~~mi~~~~~~~~~~~~~~~~~~ 74 (167) T d1ej2a_ 3 GLLVGRMQPFHRGHLQVIKSILEEVDEL-IICIGSAQLS-----HSI--RDPFTAGERVMMLTKALSENGIPASRYYIIP 74 (167) T ss_dssp EEEEECCTTCCHHHHHHHHHHTTTCSEE-EEEECSTTCC-----SSS--SSCSCHHHHHHHHHHHHHHTTCCGGGEEEEE T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCCE-EEEEECCCCC-----CCC--CCCCCHHHHHHHHHHHHHHCCCCCEEEEECC T ss_conf 9996445999989999999999977963-9997058777-----775--5446689999999997887088703577514 Q ss_pred HH--HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHH Q ss_conf 57--7522830268886214278029998345530337755602467751012641676152230233302303689998 Q gi|254780846|r 97 LE--TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174 (324) Q Consensus 97 ~~--~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l 174 (324) .. .........++. ++.+.+..|+.+ .....+.+..|+.+..++.. ....||||.||+.+ T Consensus 75 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~---~~~~ISST~IR~~i 136 (167) T d1ej2a_ 75 VQDIECNALWVGHIKM----------LTPPFDRVYSGN-----PLVQRLFSEDGYEVTAPPLF---YRDRYSGTEVRRRM 136 (167) T ss_dssp CCCCSCHHHHHHHHHH----------HSCCCSEEECCC-----HHHHHHHHHTTCCEECCCCS---STTTSSHHHHHHHH T ss_pred CHHHHHHHHHHHHHHE----------EEECEEEEECCH-----HHHHHHHHCCCCEEEECCCC---CCCCCCHHHHHHHH T ss_conf 2033357879988762----------031204898536-----99988777179769964621---24655689999999 Q ss_pred HHHH Q ss_conf 7258 Q gi|254780846|r 175 TKGH 178 (324) Q Consensus 175 ~~Gd 178 (324) ..|+ T Consensus 137 ~~g~ 140 (167) T d1ej2a_ 137 LDDG 140 (167) T ss_dssp HHTC T ss_pred HCCC T ss_conf 8599 No 9 >d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]} Probab=98.78 E-value=9.1e-09 Score=74.88 Aligned_cols=168 Identities=18% Similarity=0.233 Sum_probs=107.7 Q ss_pred CEEECCCCCCC-CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHH Q ss_conf 94224885211-27610188499993156502899999999999502797799983798689847888662000078999 Q gi|254780846|r 1 MHVFHNIEINQ-SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79 (324) Q Consensus 1 Mki~~~~~~~~-~~p~~~~~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~ 79 (324) |++++++.... .++...=+.|-|+| ++|-||..|++++.+.+ ..+|+|.--+|..|-.++.-..+-.++++-+ T Consensus 1 M~~i~~~~el~~~l~~~~i~~VPTMG---aLH~GHlsLi~~a~~~~---~~vvvSIFVNP~QF~~~eD~~~YPr~~~~D~ 74 (276) T d1v8fa_ 1 MRTVSTVAELRAALPREGVGFVPTMG---YLHRGHLALVERARREN---PFVVVSVFVNPLQFGPGEDYHRYPRDLERDR 74 (276) T ss_dssp CEEECSHHHHHHHCCSSCEEEEEECS---SCCHHHHHHHHHHHHHC---SEEEEEECCCGGGCCTTSSTTTSCCCHHHHH T ss_pred CEEECCHHHHHHHHCCCCEEEECCCC---CHHHHHHHHHHHHHHHC---CCEEEEEEECCCCCCCCCHHHCCCCCHHHHH T ss_conf 96974099999986059889985876---07489999999999758---9789999866766787101220564256349 Q ss_pred HHHHHCCCCCCCCCCCHHHHH---------------HC-----CCHHH------HHHHHCCCCCEEEEEEC-CCCCCCCC Q ss_conf 988511310002256405775---------------22-----83026------88862142780299983-45530337 Q gi|254780846|r 80 KILEKMGFSALIRYKFTLETA---------------NY-----SAEQF------IQKVLVEWLEVKTVITG-TKFRFGKD 132 (324) Q Consensus 80 ~~l~~~Gid~vi~~~F~~~~a---------------~l-----s~e~F------i~~iL~~~l~~k~ivVG-~Df~FG~~ 132 (324) ++|++.|+|.++..+-+ ++. ++ -|..| +.+ |.+..++...+-| .||. T Consensus 75 ~~l~~~~vd~vf~P~~~-e~yp~~~~~~~~~~~~l~~~leG~~RPgHF~GV~tVV~k-Lf~ii~P~~a~fGeKD~Q---- 148 (276) T d1v8fa_ 75 ALLQEAGVDLLFAPGVE-EMYPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVAR-LFLLVQPQRAYFGEKDYQ---- 148 (276) T ss_dssp HHHHHTTCSEEECCCHH-HHSCTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEEGGGHH---- T ss_pred HHHHHCCCCEEEECCCC-CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCEEEEEECCHH---- T ss_conf 99985799799833533-456655532799635335556689897137789999999-996457650145400235---- Q ss_pred CCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 7556024677510126--4167615223023330230368999872589999985 Q gi|254780846|r 133 RAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185 (324) Q Consensus 133 r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l 185 (324) -...++++.+.++ ++++.+|.++..+|-..||.+. +|..-+.+.|..+ T Consensus 149 ---Ql~iIk~mv~~l~~~i~Ii~~ptvRe~dGLAlSSRN~--~Ls~~er~~A~~i 198 (276) T d1v8fa_ 149 ---QLLVVRRMVRDLGFPVEVVGVPTVREEDGLALSSRNV--YLSPETRKKAPVL 198 (276) T ss_dssp ---HHHHHHHHHHHHTCCCEEEEECCCBCTTSCBCCGGGG--GCCHHHHHHTTHH T ss_pred ---HHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEHHHH--HCCCHHHHHHHHH T ss_conf ---8999999999828980799876675036402102455--5252145567888 No 10 >d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]} Probab=98.55 E-value=4e-08 Score=70.69 Aligned_cols=168 Identities=18% Similarity=0.191 Sum_probs=106.8 Q ss_pred CEEECCCCCCCCCCCCC---C---CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCH Q ss_conf 94224885211276101---8---84999931565028999999999995027977999837986898478886620000 Q gi|254780846|r 1 MHVFHNIEINQSLPNHL---K---GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74 (324) Q Consensus 1 Mki~~~~~~~~~~p~~~---~---~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~ 74 (324) |+|++++..-...-... . +.|-|+| ++|-||..|++++.+. ...+|+|.--+|..|-.++.-..+-.+ T Consensus 1 M~ii~~~~~l~~~~~~~r~~g~~ig~VPTMG---aLH~GHlsLi~~A~~~---~~~vvvSIFVNP~QF~~~eD~~~YPr~ 74 (282) T d1ihoa_ 1 MLIIETLPLLRQQIRRLRMEGKRVALVPTMG---NLHDGHMKLVDEAKAR---ADVVVVSIFVNPMQFDRPEDLARYPRT 74 (282) T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECS---CCCHHHHHHHHHHHHH---CSEEEEEECCCGGGCSSHHHHHHSCCC T ss_pred CEEECCHHHHHHHHHHHHHCCCCEEEECCCC---CHHHHHHHHHHHHHHH---CCCEEEEEEECCCCCCCCCHHHCCCCC T ss_conf 9788149999999999997499099982875---0548999999999874---896899997367657642112126763 Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHH--------CC-------------CHHH------HHHHHCCCCCEEEEEEC-CC Q ss_conf 789999885113100022564057752--------28-------------3026------88862142780299983-45 Q gi|254780846|r 75 PSIQEKILEKMGFSALIRYKFTLETAN--------YS-------------AEQF------IQKVLVEWLEVKTVITG-TK 126 (324) Q Consensus 75 ~~~k~~~l~~~Gid~vi~~~F~~~~a~--------ls-------------~e~F------i~~iL~~~l~~k~ivVG-~D 126 (324) ++.-+++|++.|+|.++..+-. ++.. .+ |..| +.+ |.+..++...+-| .| T Consensus 75 l~~D~~~l~~~~vd~vf~P~~~-e~yp~~~~~~~~i~~~~l~~~leG~~RPgHF~GV~tVV~k-Lf~iv~P~~a~FGeKD 152 (282) T d1ihoa_ 75 LQEDCEKLNKRKVDLVFAPSVK-EIYPNGTETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSK-LFNLVQPDIACFGEKD 152 (282) T ss_dssp HHHHHHHHHHTTCSEEECCCHH-HHCTTCSTTSCEEECTTGGGSTHHHHSTTHHHHHHHHHHH-HHHHHCCSEEEEETTS T ss_pred HHHHHHHHHHCCCCEEEECCCC-CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCEEEEEEEC T ss_conf 8888999975499589963741-1223445520366145210135788786057889999999-9986676357998716 Q ss_pred CCCCCCCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 5303377556024677510126--4167615223023330230368999872589999985 Q gi|254780846|r 127 FRFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185 (324) Q Consensus 127 f~FG~~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l 185 (324) |. -...++++.+.++ ++++.+|.++..+|-..||.+. .|..-+.+.|..+ T Consensus 153 ~Q-------Ql~iIk~mv~~~~~~i~Ii~~ptvRe~dGLAlSSRN~--~Ls~~er~~A~~i 204 (282) T d1ihoa_ 153 FQ-------QLALIRKMVADMGFDIEIVGVPIMRAKDGLALSSRNG--YLTAEQRKIAPGL 204 (282) T ss_dssp HH-------HHHHHHHHHHHHTCCCEEEEECCCBCTTSCBCCGGGG--GSCHHHHHHTTHH T ss_pred CC-------EEEEHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHH--HCCHHHHHHHHHH T ss_conf 66-------0221999998607984687533341236711124556--5011356778899 No 11 >d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Probab=98.55 E-value=5.2e-07 Score=63.49 Aligned_cols=165 Identities=10% Similarity=0.108 Sum_probs=84.5 Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE-EEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHH--CCCCCCCCCCC Q ss_conf 849999315650289999999999950279779-998379868984788866200007899998851--13100022564 Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK--MGFSALIRYKF 95 (324) Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~-viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~--~Gid~vi~~~F 95 (324) ..|++.|+||-+|.||..|.+.+.+..+-.... +.+..| +.+......+..++..++.. .+.+.+.+-+| T Consensus 20 ~~v~~f~TfnP~H~GHl~ia~~a~~~~~ld~v~~iP~~~~-------p~K~~~~~~~~~~r~~m~~~a~~~~~~~~is~~ 92 (223) T d1jhda2 20 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK-------LKKGDIPAPVRDAAIRTMAEVYFPPNTVMVTGY 92 (223) T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC-------CCTTCCCHHHHHHHHHHHHHHHSCTTCEEEEEE T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCC-------CCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCC T ss_conf 8898862789998999999999999727585698326677-------776777644499999999986357884364351 Q ss_pred HHHHHHCCCH-HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHC-----CCCEEEECCH------------- Q ss_conf 0577522830-26888621427802999834553033775560246775101-----2641676152------------- Q gi|254780846|r 96 TLETANYSAE-QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK-----YGFHTVFIDE------------- 156 (324) Q Consensus 96 ~~~~a~ls~e-~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~-----~g~~v~~i~~------------- 156 (324) ......-|+. +-++.+-....+...+++|.|.....+.-...+.+..++.. .+......+. T Consensus 93 E~~~~~~syt~~tl~~l~~~~~~~~~~iiG~D~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (223) T d1jhda2 93 GFDMLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNKIVMM 172 (223) T ss_dssp ECCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTTEEEEG T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEH T ss_conf 11025787199999999985885607888615301335767078888998613123556543342167776552230005 Q ss_pred --HHCCC---CCCCCHHHHHHHHHHHH-H------HHHHHHHHHCC Q ss_conf --23023---33023036899987258-9------99998500000 Q gi|254780846|r 157 --LRNNK---SQIVSSSNIRTALTKGH-V------LNAAHLLGYRF 190 (324) Q Consensus 157 --~~~~~---~~~ISSt~IR~~l~~Gd-i------~~an~lLGr~y 190 (324) ..... -..||||.||+.|++|. + .++.+++-..| T Consensus 173 ~~~~~~~~~~~i~ISST~IR~~l~~G~~ip~~l~~p~V~~yI~~~y 218 (223) T d1jhda2 173 RDVPDHTKEDFVLLSGTKVREMLGQGIAPPPEFSRPEVAKILMDYY 218 (223) T ss_dssp GGCTTCCGGGEECCCHHHHHHHHHTTCCCCTTTCCHHHHHHHHHHH T ss_pred HHHHCCCCCCCCEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH T ss_conf 4301005788614378999999987379984557889999999999 No 12 >d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]} Probab=98.53 E-value=4.8e-08 Score=70.18 Aligned_cols=169 Identities=16% Similarity=0.189 Sum_probs=104.1 Q ss_pred CEEECCCCCCCCCCCCC---CC---EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCH Q ss_conf 94224885211276101---88---4999931565028999999999995027977999837986898478886620000 Q gi|254780846|r 1 MHVFHNIEINQSLPNHL---KG---GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74 (324) Q Consensus 1 Mki~~~~~~~~~~p~~~---~~---~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~ 74 (324) |+||++...-...-... .. .|-|+| ++|.||..|++++.+. ....+|+|.--+|..|-.++.-..+-.+ T Consensus 9 m~i~~~~~~l~~~~~~~~~~g~~i~~VPTMG---aLH~GHlsLi~~a~~~--~~~~vvvSIFVNP~QF~~~eD~~~YPr~ 83 (286) T d2a84a1 9 LNVYSAPGDVADVSRALRLTGRRVMLVPTMG---ALHEGHLALVRAAKRV--PGSVVVVSIFVNPMQFGAGGDLDAYPRT 83 (286) T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECS---SCCHHHHHHHHHHHTS--TTCEEEEEECCCCCCTTC---------- T ss_pred EEEECCHHHHHHHHHHHHHHCCEEEEEECCC---CHHHHHHHHHHHHHHC--CCCEEEEEEEECCCCCCCCCCCCCCCCC T ss_conf 0999189999999999998299089993886---3418999999998643--7987999986466556755657669965 Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHH------CCC-------------HHH------HHHHHCCCCCEEEEEEC-CCCC Q ss_conf 789999885113100022564057752------283-------------026------88862142780299983-4553 Q gi|254780846|r 75 PSIQEKILEKMGFSALIRYKFTLETAN------YSA-------------EQF------IQKVLVEWLEVKTVITG-TKFR 128 (324) Q Consensus 75 ~~~k~~~l~~~Gid~vi~~~F~~~~a~------ls~-------------e~F------i~~iL~~~l~~k~ivVG-~Df~ 128 (324) +++-+++|++.|+|.++..+-+ ++-. .++ ..| +.+ |.+..++...+.| .||. T Consensus 84 ~~~D~~~l~~~~vd~vf~P~~~-~iyp~~~~~~v~~~~~~~~leG~~RpgHF~GV~tVV~k-Lf~ii~P~~a~fGeKD~Q 161 (286) T d2a84a1 84 PDDDLAQLRAEGVEIAFTPTTA-AMYPDGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVLK-LLQIVRPDRVFFGEKDYQ 161 (286) T ss_dssp CCSHHHHHHHTTCCEEECCCHH-HHCTTCSCSCCCCCGGGGSGGGTTCTTHHHHHHHHHHH-HHHHHCCSEEEEETTSHH T ss_pred HHHHHHHHHCCCCCEEECCCHH-HHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHCCCCEEEEEECCCH T ss_conf 5554677760687425325312-21257850257345202201467770778889999999-998626655787631417 Q ss_pred CCCCCCCCHHHHHHHHHCCC--CEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 03377556024677510126--4167615223023330230368999872589999985 Q gi|254780846|r 129 FGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185 (324) Q Consensus 129 FG~~r~Gd~~~L~~~~~~~g--~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~an~l 185 (324) -...++++.+.++ ++++.+|.++..+|-..||.+- +|..-+-..|..+ T Consensus 162 -------Ql~iIk~~v~~l~~~i~Ii~~pTvRe~dGLAlSSRN~--~Ls~~er~~A~~i 211 (286) T d2a84a1 162 -------QLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNR--YLDPAQRAAAVAL 211 (286) T ss_dssp -------HHHHHHHHHHHTTCCCEEEEECCCBCTTSCBCCGGGG--GCCHHHHHHTHHH T ss_pred -------HHHHHHHHHHHHCCCCEEEECCHHHHCCCEEHHHHHH--HCCCCHHHHHHHH T ss_conf -------9999999999846664178615212103111133545--2242014678999 No 13 >d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Probab=98.51 E-value=8.4e-07 Score=62.11 Aligned_cols=147 Identities=16% Similarity=0.003 Sum_probs=73.8 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH Q ss_conf 99993156502899999999999502797799983798689847888662000078999988511310002256405775 Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100 (324) Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a 100 (324) ++--|.||.+|+||+++++.|.+..+ ...++++..+.|..-... ......++.......-.+......++.+.. T Consensus 5 alfgGSFdP~H~GH~~ii~~a~~~~~-~~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 78 (189) T d1kama_ 5 GIFGGTFDPPHNGHLLMANEVLYQAG-LDEIWFMPNQIPPHKQNE-----DYTDSFHRVEMLKLAIQSNPSFKLELVEME 78 (189) T ss_dssp EEEEECCSSCCHHHHHHHHHHHHHTT-CSEEEEEECCCC--------------CHHHHHHHHHHHHTTCTTEEECCGGGS T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCC-CCEEEEEECCCCCCCCCC-----HHHHHHHHHHHHHHHHCCCCCEEECHHHHC T ss_conf 99663769898899999999999829-998999963577632110-----146789888887765036762122012230 Q ss_pred HCCCH------HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCH----------HHCCCCCC Q ss_conf 22830------268886214278029998345530337755602467751012641676152----------23023330 Q gi|254780846|r 101 NYSAE------QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE----------LRNNKSQI 164 (324) Q Consensus 101 ~ls~e------~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~----------~~~~~~~~ 164 (324) ...+. .++... ........++|.|...........+.+...+. ..+..... ........ T Consensus 79 ~~~~~~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (189) T d1kama_ 79 REGPSYTFDTVSLLKQR--YPNDQLFFIIGADMIEYLPKWYKLDELLNLIQ---FIGVKRPGFHVETPYPLLFADVPEFE 153 (189) T ss_dssp TTCCCSHHHHHHHHHHH--STTSEEEEEEETTTTTTCCCCHHHHHHHHHSE---EEEEECSSCCCCCSSCCEEEECCCBC T ss_pred CCCCCEEHHHHHHHHHC--CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCC---EEECCCCCCCCCCCHHHHCCCCCCCC T ss_conf 67860205556677632--77630222110000112121000354431123---11104632111100132102365576 Q ss_pred CCHHHHHHHHHHHH Q ss_conf 23036899987258 Q gi|254780846|r 165 VSSSNIRTALTKGH 178 (324) Q Consensus 165 ISSt~IR~~l~~Gd 178 (324) ||||.||+++..|. T Consensus 154 ISST~IR~~i~~~~ 167 (189) T d1kama_ 154 VSSTMIRERFKSKK 167 (189) T ss_dssp CCHHHHHHHHHHTC T ss_pred CCHHHHHHHHHCCC T ss_conf 87599999998399 No 14 >d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]} Probab=98.37 E-value=8.3e-07 Score=62.13 Aligned_cols=70 Identities=14% Similarity=0.101 Sum_probs=39.6 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCC-CCEEEE--EECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCC Q ss_conf 999931565028999999999995027-977999--83798689847888662000078999988511--3100022564 Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANN-SPITVL--SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GFSALIRYKF 95 (324) Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~-~~~~vi--TF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~--Gid~vi~~~F 95 (324) ++.-|.||-+|.||..+++.+.+.-+. ....++ -+.|+ ++......+.+.++|..+++.. +.+.+.+-++ T Consensus 7 l~~~GSFdP~H~GHl~i~~~a~~~~~~~~~~~~~~~~~~p~-----~~~~~~~~~~~~~~R~~M~~la~~~~~~~~v~~~ 81 (233) T d1nuua_ 7 LLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPV-----NDTYGKKDLAASHHRVAMARLALQTSDWIRVDPW 81 (233) T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHSSEEEEEEEEEEC-----CTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCH T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC-----CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHH T ss_conf 99830428428999999999999867102311103798367-----7875567668999999999999844587787369 No 15 >d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]} Probab=98.27 E-value=2.3e-06 Score=59.24 Aligned_cols=69 Identities=17% Similarity=0.113 Sum_probs=40.4 Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHC-CCC--EEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCC Q ss_conf 9993156502899999999999502-797--799983798689847888662000078999988511--3100022564 Q gi|254780846|r 22 VAIGNFDGIHLGHHLILEQAIKIAN-NSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GFSALIRYKF 95 (324) Q Consensus 22 vtiG~FDGvH~GHq~Li~~~~~~a~-~~~--~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~--Gid~vi~~~F 95 (324) +.-|+||-+|.||..+++.+.+.-. ... ..-+-|.|.... +.++ .+++.++|+++++.+ +.+.+.+-++ T Consensus 8 l~~GSFdP~H~GHl~ia~~a~~~l~~~~~~~~~~~~~~P~~~~---~~k~--~~~s~~~Rl~Ml~la~~~~~~~~vs~~ 81 (271) T d1kr2a_ 8 LACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDA---YKKK--GLIPAYHRVIMAELATKNSKWVEVDTW 81 (271) T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGG---GCCT--TCCCHHHHHHHHHHHTTTCSSEEECCH T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC---CCCC--CCCCHHHHHHHHHHHHHCCCCEEEEEH T ss_conf 9704467423999999999999974425615467999648998---7677--889999999999999856998899521 No 16 >d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Probab=98.15 E-value=2.9e-06 Score=58.63 Aligned_cols=37 Identities=35% Similarity=0.496 Sum_probs=26.9 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCH Q ss_conf 4999931565028999999999995027977999837986 Q gi|254780846|r 20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP 59 (324) Q Consensus 20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P 59 (324) .+|..|.||-+|+||..+++++.+.. ..+++.+.+.| T Consensus 3 ~Av~~GsFdPiH~GHl~i~~~a~~~~---d~~~v~~~~~~ 39 (157) T d1tfua_ 3 GAVCPGSFDPVTLGHVDIFERAAAQF---DEVVVAILVNP 39 (157) T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHS---SEEEEEEECCS T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHC---CHHHHHCCCCC T ss_conf 76848478988789999999999845---86774125567 No 17 >d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Probab=98.12 E-value=5.9e-06 Score=56.62 Aligned_cols=133 Identities=13% Similarity=0.053 Sum_probs=60.5 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCHHH Q ss_conf 999931565028999999999995027977999837986898478886620000789999885113--100022564057 Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--FSALIRYKFTLE 98 (324) Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~G--id~vi~~~F~~~ 98 (324) +|-.|.||-+|.||..+++.+.+... -+++.-.+.|. . ....+.++|.+++...- ........| T Consensus 4 aifgGsFdPiH~GHl~i~~~a~~~~D---~v~v~~~~~~~-----~---~~~~~~~~r~~~~~~~~~~~~~~~~~~~--- 69 (163) T d1o6ba_ 4 AVCPGSFDPVTYGHLDIIKRGAHIFE---QVYVCVLNNSS-----K---KPLFSVEERCELLREVTKDIPNITVETS--- 69 (163) T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSS---EEEEEECCCCS-----S---CCSSCHHHHHHHHHHHHTTCTTEEEEEC--- T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCC---EEEECCCCCCC-----C---CCCCCHHHHHHHHHHHCCCCCCCEECCC--- T ss_conf 99660669888899999999998689---77870353222-----2---2358999999987641035675300134--- Q ss_pred HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC-HHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHH Q ss_conf 75228302688862142780299983455303377556-02467751012641676152230233302303689998725 Q gi|254780846|r 99 TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD-RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177 (324) Q Consensus 99 ~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd-~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~G 177 (324) .....+....... .. ......++.-. ..... ...-+.+. ..++...+.. ......||||.||+.+..| T Consensus 70 ---~~~~~~~~~~~~~-~~--~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~ISST~IR~~i~~g 138 (163) T d1o6ba_ 70 ---QGLLIDYARRKNA-KA--ILRGLRAVSDF-EYEMQGTSVNRVLD--ESIETFFMMA--NNQYSFLSSSIVKEVARYD 138 (163) T ss_dssp ---SSCHHHHHHHTTC-SE--EEEEECSGGGH-HHHHHHHHHHHHHC--TTSEEEEEEC--CSTTTTCCHHHHHHHHHTT T ss_pred ---CCCCCCCCEECCC-CE--EEEEECCCCHH-HHHHHHHHHHHHHC--CCCCEEECCC--CCHHHCCCHHHHHHHHHCC T ss_conf ---4543322200275-03--45420374124-66778999999858--5653675234--2000001779999999929 Q ss_pred H Q ss_conf 8 Q gi|254780846|r 178 H 178 (324) Q Consensus 178 d 178 (324) . T Consensus 139 ~ 139 (163) T d1o6ba_ 139 G 139 (163) T ss_dssp C T ss_pred C T ss_conf 9 No 18 >d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]} Probab=98.07 E-value=6.1e-06 Score=56.48 Aligned_cols=26 Identities=31% Similarity=0.508 Sum_probs=22.1 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC Q ss_conf 99993156502899999999999502 Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIAN 46 (324) Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a~ 46 (324) ++--|.||-+|+||+.+++++.+..+ T Consensus 3 ~ifgGsFdP~H~GHl~ii~~a~~~~D 28 (160) T d1od6a_ 3 VVYPGSFDPLTNGHLDVIQRASRLFE 28 (160) T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSS T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCC T ss_conf 99423268767999999999998488 No 19 >d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]} Probab=98.04 E-value=2e-05 Score=53.14 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=24.8 Q ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCE-EEEEECC Q ss_conf 931565028999999999995027977-9998379 Q gi|254780846|r 24 IGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNP 57 (324) Q Consensus 24 iG~FDGvH~GHq~Li~~~~~~a~~~~~-~viTF~p 57 (324) =|.||-+|.||..+++.+.+..+.... ++.+.+| T Consensus 9 gGSFnP~h~GHl~~~~~a~~~~~~d~v~~~p~~~~ 43 (213) T d1k4ma_ 9 GGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVP 43 (213) T ss_dssp EECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSC T ss_pred ECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCC T ss_conf 04758484999999999999709998999992888 No 20 >d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]} Probab=97.93 E-value=3.2e-06 Score=58.29 Aligned_cols=27 Identities=30% Similarity=0.428 Sum_probs=22.2 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHC Q ss_conf 499993156502899999999999502 Q gi|254780846|r 20 GVVAIGNFDGIHLGHHLILEQAIKIAN 46 (324) Q Consensus 20 ~vvtiG~FDGvH~GHq~Li~~~~~~a~ 46 (324) -++=.|.||-+|.||+.+++.+.+... T Consensus 2 ~AifgGsFdP~H~GHl~li~~a~~~~D 28 (157) T d1qjca_ 2 RAIYPGTFDPITNGHIDIVTRATQMFD 28 (157) T ss_dssp EEEEEECCTTCCHHHHHHHHHHHTTSS T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHCC T ss_conf 799802468788999999999998579 No 21 >d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]} Probab=97.81 E-value=2.2e-05 Score=52.83 Aligned_cols=25 Identities=44% Similarity=0.628 Sum_probs=21.4 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 9999315650289999999999950 Q gi|254780846|r 21 VVAIGNFDGIHLGHHLILEQAIKIA 45 (324) Q Consensus 21 vvtiG~FDGvH~GHq~Li~~~~~~a 45 (324) ++=.|.||-+|.||..+++++.+.. T Consensus 3 aifgGsFdPiH~GHl~i~~~a~~~~ 27 (157) T d1vlha_ 3 AVYPGSFDPITLGHVDIIKRALSIF 27 (157) T ss_dssp EEEEECCTTCCHHHHHHHHHHHTTC T ss_pred EEEEECCCCCCHHHHHHHHHHHHHC T ss_conf 8972337988689999999999853 No 22 >d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Probab=97.62 E-value=0.0004 Score=44.69 Aligned_cols=151 Identities=17% Similarity=0.143 Sum_probs=88.4 Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC--C--CCEEEEEECCCHHHHHCCCCCCCCCCHHHHHH----HHHHH--CCCC Q ss_conf 8499993156502899999999999502--7--97799983798689847888662000078999----98851--1310 Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIAN--N--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE----KILEK--MGFS 88 (324) Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~--~--~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~----~~l~~--~Gid 88 (324) .+|++.=+=.-+|+||..|++.+.+... . ...+++. |. ..+.++... +.+-+. .++.+ +.-+ T Consensus 24 ~~VvaFqTRNp~HraHe~i~~~a~~~~~~~~~~~~~lli~----Pv--vG~~k~gD~--~~~~~~~~y~~l~~~~~~~~~ 95 (235) T d1x6va2 24 DAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLH----PL--GGWTKDDDV--PLMWRMKQHAAVLEEGVLNPE 95 (235) T ss_dssp SEEEEEEESSCCCHHHHHHHHHHHHHHHHTTCSSEEEEEE----EB--CSCCCTTSC--CHHHHHHHHHHHHHTTSSCGG T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE----EC--CCCCCCCCC--CHHHHHHHHHHHHHHCCCCCC T ss_conf 7677863289986789999999999987433557728983----01--156777764--818899999999984268977 Q ss_pred CCCCCCCH--HHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCC--CCC--------CHHHHHHHHHCCCCEEEECCH Q ss_conf 00225640--577522830268886214278029998345530337--755--------602467751012641676152 Q gi|254780846|r 89 ALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD--RAG--------DRGILQKRGEKYGFHTVFIDE 156 (324) Q Consensus 89 ~vi~~~F~--~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~--r~G--------d~~~L~~~~~~~g~~v~~i~~ 156 (324) .+++..+. ..+|. .-|..+..++.+.+++.+++||-|+. |-+ ..| ..+.+.++.++.|++++.... T Consensus 96 ~~~l~~l~~~mryAG-PrEAllhAiiRkN~GcThfiVGRDHA-G~g~~~~~~~~y~~~~a~~~~~~~~~~l~I~ii~~~~ 173 (235) T d1x6va2 96 TTVVAIFPSPMMYAG-PTEVQWHCRARMVAGANFYIVGRDPA-GMPHPETGKDLYEPSHGAKVLTMAPGLITLEIVPFRV 173 (235) T ss_dssp GEEECCBCCCCCCCH-HHHHHHHHHHHHHTTCSEEEECSSTT-CCBCTTTCSBSSCTTHHHHHHHHCSSCTTSEEEECCC T ss_pred CEEEEECCCCCCCCC-CHHHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECC T ss_conf 579973366544466-08999999999864887588767666-7788766654568427899987363335324654121 Q ss_pred HHC---------------CCCCCCCHHHHHHHHHHHHH Q ss_conf 230---------------23330230368999872589 Q gi|254780846|r 157 LRN---------------NKSQIVSSSNIRTALTKGHV 179 (324) Q Consensus 157 ~~~---------------~~~~~ISSt~IR~~l~~Gdi 179 (324) +.. .+-..||.|.||++|..|.. T Consensus 174 ~~Yc~~~~~~~~~~~~~~~~~~~ISGT~iR~~L~~G~~ 211 (235) T d1x6va2 174 AAYNKKKKRMDYYDSEHHEDFEFISGTRMRKLAREGQK 211 (235) T ss_dssp EEEETTTTEEEECCSTTGGGEECCCHHHHHHHHHTTCC T ss_pred EEEECCCCCEECCCCCCCCCEEEECHHHHHHHHHCCCC T ss_conf 13304578463277899877065268999999987498 No 23 >d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=97.41 E-value=0.00054 Score=43.83 Aligned_cols=150 Identities=16% Similarity=0.196 Sum_probs=84.3 Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHH----HHHHCCCCCCCCCC Q ss_conf 84999931565028999999999995027977999837986898478886620000789999----88511310002256 Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK----ILEKMGFSALIRYK 94 (324) Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~----~l~~~Gid~vi~~~ 94 (324) ..|++.=+=.-+|+||..|++++.+.++ .. +++. |. +.+.++.. .+.+-+.+ +++.+.-+.+++.+ T Consensus 21 ~~v~afqTrnp~Hr~He~i~~~a~~~~~-~~-lli~----p~--vg~~k~gd--~~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (221) T d1g8fa2 21 DRVVAFQTRNPMHRAHRELTVRAAREAN-AK-VLIH----PV--VGLTKPGD--IDHHTRVRVYQEIIKRYPNGIAFLSL 90 (221) T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHT-CE-EEEE----EB--CSBCSTTC--CCHHHHHHHHHHHGGGSCTTSEEECC T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHCC-CC-EEEE----EC--CCCCCCCC--CCHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 8688986389997789999999998548-98-8994----02--15776455--79799999999999746898589972 Q ss_pred CHHHHHHC-CCHHHHHHHHCCCCCEEEEEECCCCCC-CCCCCC--------CHHHHHHHHHCCCCEEEECCHHH------ Q ss_conf 40577522-830268886214278029998345530-337755--------60246775101264167615223------ Q gi|254780846|r 95 FTLETANY-SAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG--------DRGILQKRGEKYGFHTVFIDELR------ 158 (324) Q Consensus 95 F~~~~a~l-s~e~Fi~~iL~~~l~~k~ivVG~Df~F-G~~r~G--------d~~~L~~~~~~~g~~v~~i~~~~------ 158 (324) +.....-- .-|.....++-+.+++.+++||-|..= |.+..| ....+.++.++.|++++..+.+. T Consensus 91 ~~~~m~yaGPrEA~lhAiirkN~GcthfiVGRDHAG~g~~~~~~~~Y~~~~a~~~~~~~~~~l~I~ii~~~~~~Yc~~c~ 170 (221) T d1g8fa2 91 LPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYLPDED 170 (221) T ss_dssp BCCBCCCCHHHHHHHHHHHHHHTTCSEEECCTTTTCCCBCTTSCBSSCTTHHHHHHHHTHHHHCSEEECCCCEEEEGGGT T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCCC T ss_conf 36300245538899999999863888068646456878898642235714567888751644560231245146621377 Q ss_pred -------C--CC--CCCCCHHHHHHHHHHHH Q ss_conf -------0--23--33023036899987258 Q gi|254780846|r 159 -------N--NK--SQIVSSSNIRTALTKGH 178 (324) Q Consensus 159 -------~--~~--~~~ISSt~IR~~l~~Gd 178 (324) + .+ -..||+|.||++|.+|. T Consensus 171 ~~v~~~~c~h~~~~~i~ISGT~iR~~L~~G~ 201 (221) T d1g8fa2 171 RYAPIDQIDTTKTRTLNISGTELRRRLRVGG 201 (221) T ss_dssp EEEEGGGCSSSCCCCBCCCHHHHHHHHHHTC T ss_pred EEEECCCCCCCCCCEEEECHHHHHHHHHCCC T ss_conf 1877665689867548746899999998799 No 24 >d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]} Probab=96.88 E-value=0.017 Score=34.15 Aligned_cols=148 Identities=12% Similarity=0.208 Sum_probs=83.2 Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHH----HHHH-CCCCCCCCC Q ss_conf 84999931565028999999999995027977999837986898478886620000789999----8851-131000225 Q gi|254780846|r 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK----ILEK-MGFSALIRY 93 (324) Q Consensus 19 ~~vvtiG~FDGvH~GHq~Li~~~~~~a~~~~~~viTF~p~P~~~~~~~~~~~~l~~~~~k~~----~l~~-~Gid~vi~~ 93 (324) ..|++.=+=.-+|+||..|++.+.+.+++ +++.+ . +.+.++... +.+-+.+ +++. +.-+.+++. T Consensus 21 ~~v~aFqTrnp~Hr~He~i~~~a~~~~~~---lli~p----~--vG~~k~gd~--~~~~r~~~y~~~~~~~~~~~~v~l~ 89 (214) T d1v47a2 21 RKVVAFQTRNAPHRAHEYLIRLGLELADG---VLVHP----I--LGAKKPDDF--PTEVIVEAYQALIRDFLPQERVAFF 89 (214) T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHSSE---EEEEE----B--CSCCCTTSC--CHHHHHHHHHHHHHHHSCGGGEEEC T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHCCC---EEEEE----E--ECCCCCCCC--CHHHHHHHHHHHHHHCCCCCEEEEE T ss_conf 87988723899878999999999970587---79964----2--236875665--8899999999998523787729998 Q ss_pred CCHHHHHHCCC-HHHHHHHHCCCCCEEEEEECCCCCCCCCCCC---CH-HHHHHHHHCCCCEEEECCHHH---------- Q ss_conf 64057752283-0268886214278029998345530337755---60-246775101264167615223---------- Q gi|254780846|r 94 KFTLETANYSA-EQFIQKVLVEWLEVKTVITGTKFRFGKDRAG---DR-GILQKRGEKYGFHTVFIDELR---------- 158 (324) Q Consensus 94 ~F~~~~a~ls~-e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~G---d~-~~L~~~~~~~g~~v~~i~~~~---------- 158 (324) ++.....--.| |.....++-+.+++.+.+||-|.. |.+.-= +. ..++++ ++.|++++..+.+. T Consensus 90 ~~~~~m~yaGPrEA~lhAiirkN~GcthfiVGRDHA-G~g~~Y~~~~a~~i~~~~-~~l~I~ii~~~e~~Yc~~c~~~v~ 167 (214) T d1v47a2 90 GLATPMRYAGPKEAVFHALVRKNFGATHFLVGRDHA-GVGDFYDPYAAHRIFDRL-PPLGIEIVKVGAVFHCPLCGGIAS 167 (214) T ss_dssp CBCSCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT-CSTTCSCTTHHHHGGGGS-CCCSSEEEECCCEEEETTTTEEEE T ss_pred ECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC-CHHHCCCCHHHHHHHHHC-CCCCCEEEECCCCEEEHHHCCEEE T ss_conf 547621004615899999999865887388747677-622137933556898757-726826997162253364385633 Q ss_pred ---CCCC-----CCCCHHHHHHHHHHHHH Q ss_conf ---0233-----30230368999872589 Q gi|254780846|r 159 ---NNKS-----QIVSSSNIRTALTKGHV 179 (324) Q Consensus 159 ---~~~~-----~~ISSt~IR~~l~~Gdi 179 (324) +..+ ..||.|.||++|.+|.. T Consensus 168 ~~~c~~~~~~~~~~ISGT~iR~~L~~G~~ 196 (214) T d1v47a2 168 ERTCPEGHREKRTAISMTKVRALLREGKA 196 (214) T ss_dssp TTTSCGGGGGGCEECCHHHHHHHHHTTCC T ss_pred CCCCCCCCCCCCEECCHHHHHHHHHCCCC T ss_conf 35578877644455078999999987599 No 25 >d1h5ya_ c.1.2.1 (A:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Probab=51.45 E-value=5 Score=18.05 Aligned_cols=81 Identities=11% Similarity=0.160 Sum_probs=43.0 Q ss_pred CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCC----------CC--CHHH Q ss_conf 00078999988511310002256405775228302688862142780299983455303377----------55--6024 Q gi|254780846|r 72 LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR----------AG--DRGI 139 (324) Q Consensus 72 l~~~~~k~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r----------~G--d~~~ 139 (324) +.+.++-..++ +.|++.+++-. .+-.+| +|+++ +.+.++.+.++++-|++.+.+. .. +... T Consensus 85 Ir~~e~~~~ll-~~G~~kVii~s----~~~~~~-~~~~~-~~~~~G~q~iv~slD~~~~~~~~~v~~~~~~~~~~~~~~~ 157 (252) T d1h5ya_ 85 VRSLEDATTLF-RAGADKVSVNT----AAVRNP-QLVAL-LAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVK 157 (252) T ss_dssp CCSHHHHHHHH-HHTCSEEEESH----HHHHCT-HHHHH-HHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHH T ss_pred CCHHHHHHHHH-HCCCCEEEECC----CCCCCC-CHHHH-HHHHCCCCCEEEEEEEEECCCCEEEEEECCEECCCCCHHH T ss_conf 21145556675-24880798345----445796-16789-9986287858999999976993799996996868988999 Q ss_pred HHHHHHCCCCEEEECCHHHC Q ss_conf 67751012641676152230 Q gi|254780846|r 140 LQKRGEKYGFHTVFIDELRN 159 (324) Q Consensus 140 L~~~~~~~g~~v~~i~~~~~ 159 (324) +.+...++|+.-.++-.+-. T Consensus 158 ~~~~~~~~g~~eii~tdI~~ 177 (252) T d1h5ya_ 158 WAKEVEELGAGEILLTSIDR 177 (252) T ss_dssp HHHHHHHHTCSEEEEEETTT T ss_pred HHHHHHHCCCCEEEEEEECC T ss_conf 99999856999899972545 No 26 >d2cbia2 c.1.8.10 (A:179-495) Hyaluronidase catalytic domain {Clostridium perfringens [TaxId: 1502]} Probab=48.32 E-value=5.5 Score=17.78 Aligned_cols=229 Identities=11% Similarity=0.052 Sum_probs=113.8 Q ss_pred HHHHHHHHHHCCCCE-EEEEECCCHHHHHCCC--CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHH---H Q ss_conf 999999995027977-9998379868984788--866200007899998851131000225640577522830268---8 Q gi|254780846|r 36 LILEQAIKIANNSPI-TVLSFNPHPRTIIQSS--SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI---Q 109 (324) Q Consensus 36 ~Li~~~~~~a~~~~~-~viTF~p~P~~~~~~~--~~~~~l~~~~~k~~~l~~~Gid~vi~~~F~~~~a~ls~e~Fi---~ 109 (324) +-++..++.|+..+. .++.. ||-.=+.-. ....-+..+..|++.|.++|+..+ .+-|| ++....+..-. . T Consensus 59 ~~~~~l~~~a~~~~v~fv~~i--sPGl~~~~~~~~~~~d~~~L~~K~~ql~~~Gvr~f-aIlfD-DI~~~~~~~~a~~~n 134 (317) T d2cbia2 59 QRMQELINASAENKVDFVFGI--SPGIDIRFDGDAGEEDFNHLITKAESLYDMGVRSF-AIYWD-DIQDKSAAKHAQVLN 134 (317) T ss_dssp HHHHHHHHHHHHTTCEEEEEE--CGGGTCCCSHHHHHHHHHHHHHHHHHHHTTTCCEE-EEECT-TCSSCCHHHHHHHHH T ss_pred HHHHHHHHHHHHCCCEEEEEE--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE-EEECC-CCCCCCHHHHHHHHH T ss_conf 999999999997498389996--89976666641149999999999999997698879-98514-455522599999999 Q ss_pred HH----HCCCCC-EEEEEECCCCCCCC--CCCCCHHHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHH Q ss_conf 86----214278-02999834553033--775560246775101264167615223023330230368999872589999 Q gi|254780846|r 110 KV----LVEWLE-VKTVITGTKFRFGK--DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182 (324) Q Consensus 110 ~i----L~~~l~-~k~ivVG~Df~FG~--~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gdi~~a 182 (324) .+ ...... ...++|-..|.-.- ....+.+.|+.+++...=++.+. -+ +..+||++. ...+++.+ T Consensus 135 ~~~~~~~~~~~~~~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~~~i~if---WT-G~~VVs~~i-----s~~~~~~~ 205 (317) T d2cbia2 135 RFNEEFVKAKGDVKPLITVPTEYDTGAMVSNGQPRAYTRIFAETVDPSIEVM---WT-GPGVVTNEI-----PLSDAQLI 205 (317) T ss_dssp HHHHHTHHHHSSCCCCEEECSCCSHHHHEETTEECHHHHHHHHHSCTTSEEE---EC-SSSSSCSCB-----CHHHHHHH T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEE---EC-CCCCCCCCC-----CHHHHHHH T ss_conf 9999999854888870786853155423478874899999997489888489---63-797427858-----99999998 Q ss_pred HHHHHHCCHHHHHHHHCCCCCCEEEEEEEEEEHHCCCCC--CHHHHEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEE Q ss_conf 985000000000122100201101111121100002223--101100024763056562110578997267797149999 Q gi|254780846|r 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260 (324) Q Consensus 183 n~lLGr~y~i~G~Vv~G~~~Gr~lGfPTaNi~~~~~~~p--~~GVY~~~v~~~~~~~~~~v~niG~~PT~~~~~~~~iE~ 260 (324) .+.++|+-.|= -|..+++++.. --|-|..+ +....+.+.-+..||+-.... -.+- T Consensus 206 ~~~~~r~~~iW-----------------DNypvNDy~~~rL~lGp~~gr----~~~l~~~~~G~~~NPm~q~e~-ski~- 262 (317) T d2cbia2 206 SGIYNRNMAVW-----------------WNYPVTDYFKGKLALGPMHGL----DKGLNQYVDFFTVNPMEHAEL-SKIS- 262 (317) T ss_dssp HHHHTSCEEEE-----------------ECCSCCTTSTTSCCCCCCCSB----CTTGGGTEEEEEECCCSCHHH-HHHH- T ss_pred HHCCCCCCEEE-----------------ECCCCCCCCCCCEEECCCCCC----CCCHHCCCCEEEECCCCCCCC-CHHH- T ss_conf 74026897379-----------------692226788786666675687----832000251799888674001-4899- Q ss_pred EEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHH---HHHHHHHHHHHHHCCC Q ss_conf 94067855189889999460000887468989999999---9979999999874487 Q gi|254780846|r 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM---GEDEKKARKILESSYP 314 (324) Q Consensus 261 hildf~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI---~~D~~~a~~~l~~~~~ 314 (324) |+ .+-+|.+.-..|+--+...+.+ ..+...+-..|+.+.. T Consensus 263 --------l~------t~a~y~wn~~~yd~~~sw~~a~~~l~~~~~~~~~~fa~~~s 305 (317) T d2cbia2 263 --------IH------TAADYSWNMDNYDYDKAWNRAIDMLYGDLAEDMKVFANHST 305 (317) T ss_dssp --------HH------HHHHHHHSCTTCCHHHHHHHHHHHHHGGGHHHHHHHHTTSC T ss_pred --------HH------HHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC T ss_conf --------99------99998628423797899999999878430999999997436 No 27 >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Probab=48.18 E-value=2.5 Score=19.95 Aligned_cols=27 Identities=22% Similarity=0.285 Sum_probs=18.5 Q ss_pred CHHHHHHHHHHHHHHCCCCE-EEEEECC Q ss_conf 28999999999995027977-9998379 Q gi|254780846|r 31 HLGHHLILEQAIKIANNSPI-TVLSFNP 57 (324) Q Consensus 31 H~GHq~Li~~~~~~a~~~~~-~viTF~p 57 (324) +.|..+=++++++.|+..+. +++.+.+ T Consensus 65 ~~Gt~~d~~~lv~~~h~~gi~VilD~V~ 92 (391) T d1lwha2 65 EYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (391) T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECT T ss_pred CCCCHHHHHHHHHHHHHCCCEEEECCCC T ss_conf 2399999999999997359878443310 No 28 >d1p5dx1 c.84.1.1 (X:9-154) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Probab=46.17 E-value=4.6 Score=18.29 Aligned_cols=68 Identities=16% Similarity=0.127 Sum_probs=39.5 Q ss_pred HHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEE Q ss_conf 885113100022564057752283026888621427802999834553033775560246775101264167 Q gi|254780846|r 81 ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152 (324) Q Consensus 81 ~l~~~Gid~vi~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~ 152 (324) +++.++|=.++--+||++++..=+..|...+..+ +.+.|+||.|-|+....- ...+.+--...|++|. T Consensus 5 if~~~dIRGi~~~~lt~~~~~~ig~a~~~~~~~~--~~~~VvIg~D~R~ss~~~--~~~~~~gl~~~G~~V~ 72 (146) T d1p5dx1 5 IFRAYDIRGVVGDTLTAETAYWIGRAIGSESLAR--GEPCVAVGRDGRLSGPEL--VKQLIQGLVDCGCQVS 72 (146) T ss_dssp GBCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHT--TCCEEEEEECSCTTHHHH--HHHHHHHHHTBTCEEE T ss_pred HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHH--HHHHHEEECCCCEEEE T ss_conf 6653577025799969999999999999998755--998899997786440166--6532206505764887 No 29 >d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]} Probab=44.16 E-value=9.1 Score=16.35 Aligned_cols=14 Identities=14% Similarity=0.083 Sum_probs=9.5 Q ss_pred HHHHCCHHHHHHHH Q ss_conf 50000000001221 Q gi|254780846|r 185 LLGYRFTIESDVIH 198 (324) Q Consensus 185 lLGr~y~i~G~Vv~ 198 (324) .+|-.|..-|.|-. T Consensus 117 ~~g~DYi~~gpvf~ 130 (206) T d1xi3a_ 117 KKGADYLGAGSVFP 130 (206) T ss_dssp HHTCSEEEEECSSC T ss_pred HCCCCEEEECCCCC T ss_conf 66988798522334 No 30 >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Probab=42.96 E-value=9.6 Score=16.19 Aligned_cols=25 Identities=12% Similarity=-0.012 Sum_probs=16.6 Q ss_pred CCHHHHHHHHHHHCCCCCCCCCCCH Q ss_conf 0007899998851131000225640 Q gi|254780846|r 72 LSPPSIQEKILEKMGFSALIRYKFT 96 (324) Q Consensus 72 l~~~~~k~~~l~~~Gid~vi~~~F~ 96 (324) .....+|+..|+++||+.|.+.|+. T Consensus 22 ~~~i~~kLdyLk~LGvt~I~l~Pi~ 46 (390) T d1ud2a2 22 WNRLHDDAAALSDAGITAIWIPPAY 46 (390) T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCS T ss_pred HHHHHHHHHHHHHCCCCEEEECCCC T ss_conf 9999997999997699889969780 No 31 >d1thfd_ c.1.2.1 (D:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} Probab=40.79 E-value=10 Score=15.97 Aligned_cols=22 Identities=9% Similarity=0.285 Sum_probs=8.9 Q ss_pred HHHHHHHCCCCCEEEEEECCCCC Q ss_conf 26888621427802999834553 Q gi|254780846|r 106 QFIQKVLVEWLEVKTVITGTKFR 128 (324) Q Consensus 106 ~Fi~~iL~~~l~~k~ivVG~Df~ 128 (324) +|++++ .+.++.+.+++.-|++ T Consensus 111 ~~l~~~-~~~~G~~~iv~~id~~ 132 (253) T d1thfd_ 111 SLITQI-AQTFGSQAVVVAIDAK 132 (253) T ss_dssp HHHHHH-HHHHCGGGEEEEEEEE T ss_pred HHHHHH-HHHCCCEEEEEEEEEC T ss_conf 999989-9980981499755310 No 32 >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Probab=35.45 E-value=13 Score=15.44 Aligned_cols=20 Identities=25% Similarity=0.255 Sum_probs=14.9 Q ss_pred CHHHHHHHHHHHHHHCCCCE Q ss_conf 28999999999995027977 Q gi|254780846|r 31 HLGHHLILEQAIKIANNSPI 50 (324) Q Consensus 31 H~GHq~Li~~~~~~a~~~~~ 50 (324) |.|-.+-++.+++.|+..+. T Consensus 82 ~~Gt~~d~~~LV~~aH~~Gi 101 (361) T d1mxga2 82 RFGSKEELVRLIQTAHAYGI 101 (361) T ss_dssp SSCCHHHHHHHHHHHHHTTC T ss_pred CCCCHHHHHHHHHHHHHCCC T ss_conf 88999999999999997799 No 33 >d2gtia2 d.294.1.2 (A:217-369) Nsp15, C-terminal domain {Murine hepatitis virus, MHV [TaxId: 11138]} Probab=34.35 E-value=2.9 Score=19.53 Aligned_cols=61 Identities=15% Similarity=0.189 Sum_probs=41.5 Q ss_pred CCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHH Q ss_conf 6405775228302688862142780299983455303377556024677510126416761522 Q gi|254780846|r 94 KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL 157 (324) Q Consensus 94 ~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~ 157 (324) +..++|-+|+.++||.++=.+.++..+|+-|+.-+ .--|+...|..+-+..-.....++++ T Consensus 20 ~mE~DFL~m~~~~Fi~kY~l~d~~~eHivyGd~sk---~tiGGlHllIs~~r~~~~~~l~~~~~ 80 (153) T d2gtia2 20 EMEKDFMDLDDDVFIAKYSLQDYAFEHVVYGSFNQ---KIIGGLHLLIGLARRQQKSNLVIQEF 80 (153) T ss_dssp HHHHHHHHSCHHHHHHHTTCGGGCHHHHTTCBCSS---SBCBCCCBHHHHHHHTTTSCEEEEES T ss_pred HHHHHHHHHCHHHHHHHCCCCCCCCCEEEEECCCC---CCCCCHHHHHHHHHHHHCCCCCCCCC T ss_conf 77798873067899987383114763699944588---83052266999998763233014401 No 34 >d3c8ya1 c.96.1.1 (A:210-574) Fe-only hydrogenase, catalytic domain {Clostridium pasteurianum [TaxId: 1501]} Probab=30.16 E-value=15 Score=14.88 Aligned_cols=67 Identities=13% Similarity=0.221 Sum_probs=37.4 Q ss_pred HCCCCEEEEEECCCHHHHHCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCCCCHHHHHH-CCCHHHHHHH Q ss_conf 027977999837986898478886620-000789999885113100022564057752-2830268886 Q gi|254780846|r 45 ANNSPITVLSFNPHPRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETAN-YSAEQFIQKV 111 (324) Q Consensus 45 a~~~~~~viTF~p~P~~~~~~~~~~~~-l~~~~~k~~~l~~~Gid~vi~~~F~~~~a~-ls~e~Fi~~i 111 (324) +++.+.+|++..|.-+.-+...-.... ..+..+=...|+++|+++|+...|-.++.- -++.+|++.+ T Consensus 10 ~~~~k~vV~siaP~~r~sla~~f~l~~~~~~~~kl~~~lk~LGF~~V~dt~~gad~~~~e~~~E~~~r~ 78 (365) T d3c8ya1 10 NAPEKHVIVAMAPSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRI 78 (365) T ss_dssp HCTTCEEEEEECGGGGGTGGGGGTCCSSCCCHHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHHHHH T ss_pred HCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHH T ss_conf 689958999989278999999848994300289999999986999999837888999999999999998 No 35 >d2tpsa_ c.1.3.1 (A:) Thiamin phosphate synthase {Bacillus subtilis [TaxId: 1423]} Probab=25.72 E-value=18 Score=14.38 Aligned_cols=15 Identities=13% Similarity=0.096 Sum_probs=9.3 Q ss_pred HHHHHHHHCCHHHHHH Q ss_conf 9998500000000012 Q gi|254780846|r 181 NAAHLLGYRFTIESDV 196 (324) Q Consensus 181 ~an~lLGr~y~i~G~V 196 (324) .|.+ +|-.|-.-|.| T Consensus 130 ~a~~-~g~DYi~~gpv 144 (226) T d2tpsa_ 130 QAEE-DGADYVGLGPI 144 (226) T ss_dssp HHHH-HTCSEEEECCS T ss_pred HHHH-CCCCEEEEECC T ss_conf 9885-76776988402 No 36 >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Probab=25.53 E-value=18 Score=14.36 Aligned_cols=19 Identities=21% Similarity=0.223 Sum_probs=10.5 Q ss_pred CHHHHHHHHHHHHHHCCCC Q ss_conf 2899999999999502797 Q gi|254780846|r 31 HLGHHLILEQAIKIANNSP 49 (324) Q Consensus 31 H~GHq~Li~~~~~~a~~~~ 49 (324) ++|-.+=++++++.|+..+ T Consensus 74 ~~Gt~~df~~Lv~~~H~~G 92 (393) T d1e43a2 74 KYGTKSELQDAIGSLHSRN 92 (393) T ss_dssp SSCCHHHHHHHHHHHHHTT T ss_pred CCCCHHHHHHHHHHHHHCC T ss_conf 8999999999999999869 No 37 >d2h85a2 d.294.1.2 (A:191-345) Nsp15, C-terminal domain {SARS coronavirus [TaxId: 227859]} Probab=24.66 E-value=3.9 Score=18.72 Aligned_cols=49 Identities=14% Similarity=0.236 Sum_probs=36.8 Q ss_pred CCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH Q ss_conf 2564057752283026888621427802999834553033775560246775 Q gi|254780846|r 92 RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143 (324) Q Consensus 92 ~~~F~~~~a~ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~ 143 (324) .-++.++|-+|+.++||+++=.+.++..+|+-|+.-+ .--|+...|..+ T Consensus 16 rs~me~DFL~~d~~~Fi~ky~led~~~eHi~yGd~s~---~~iGGlH~lis~ 64 (155) T d2h85a2 16 RSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDFSH---GQLGGLHLMIGL 64 (155) T ss_dssp CSHHHHHHHHSCHHHHHHHTTCTTSCHHHHTTCBCSS---SBCBCCCBHHHH T ss_pred CCHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEECCCC---CCCCCHHHHHHH T ss_conf 7533366663086999987282003775699943588---831630558889 No 38 >d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]} Probab=24.46 E-value=19 Score=14.23 Aligned_cols=52 Identities=12% Similarity=0.085 Sum_probs=34.8 Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCH Q ss_conf 0268886214278029998345530337755602467751012641676152 Q gi|254780846|r 105 EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE 156 (324) Q Consensus 105 e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~~L~~~~~~~g~~v~~i~~ 156 (324) +..++++....-++..++||.-.=.-..|.-..+..+++++++++....+.. T Consensus 94 ~~~~~~i~~~~~~~~iilVgnK~Dl~~~~~v~~~~~~~~~~~~~~~~~e~Sa 145 (164) T d1z2aa1 94 SSWREKVVAEVGDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSV 145 (164) T ss_dssp HHHHHHHHHHHCSCCEEEEEECGGGGGGCSSCHHHHHHHHHHHTCEEEECBT T ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHCCCEEEEECC T ss_conf 2343322223898327776325775344456402667799875987999606 No 39 >d1ex2a_ c.51.4.2 (A:) Maf protein {Bacillus subtilis [TaxId: 1423]} Probab=24.32 E-value=11 Score=15.70 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=25.8 Q ss_pred CHHHHHHHHHHHCCCCCCCC-CCCHHHH-HHCCCHHHHHHH Q ss_conf 00789999885113100022-5640577-522830268886 Q gi|254780846|r 73 SPPSIQEKILEKMGFSALIR-YKFTLET-ANYSAEQFIQKV 111 (324) Q Consensus 73 ~~~~~k~~~l~~~Gid~vi~-~~F~~~~-a~ls~e~Fi~~i 111 (324) +.-..|.++|+++|+++.+. .+|++.. ...+|.+++..+ T Consensus 9 S~SprR~~lL~~~gi~f~v~~~~idE~~~~~~~p~~~v~~l 49 (185) T d1ex2a_ 9 SQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWL 49 (185) T ss_dssp CCCHHHHHHHHTTCCCCEECCCCCCCCCCTTSCHHHHHHHH T ss_pred CCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHH T ss_conf 78999999998689998997999887767799979999999 No 40 >d1ka9f_ c.1.2.1 (F:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} Probab=23.54 E-value=20 Score=14.11 Aligned_cols=18 Identities=11% Similarity=0.313 Sum_probs=7.7 Q ss_pred HHHHHHCCCCCCCCCCCH Q ss_conf 998851131000225640 Q gi|254780846|r 79 EKILEKMGFSALIRYKFT 96 (324) Q Consensus 79 ~~~l~~~Gid~vi~~~F~ 96 (324) .+.+.+.|+|.+++++.+ T Consensus 36 a~~~~~~g~dei~iiDl~ 53 (251) T d1ka9f_ 36 ARAYDEAGADELVFLDIS 53 (251) T ss_dssp HHHHHHHTCSCEEEEECC T ss_pred HHHHHHCCCCEEEEEECC T ss_conf 999998699989998444 No 41 >d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]} Probab=22.25 E-value=21 Score=13.95 Aligned_cols=91 Identities=11% Similarity=0.129 Sum_probs=50.8 Q ss_pred CCHHHHHHHHHHHCCCCCCCCCCCHHHHHH-------------CCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHH Q ss_conf 000789999885113100022564057752-------------2830268886214278029998345530337755602 Q gi|254780846|r 72 LSPPSIQEKILEKMGFSALIRYKFTLETAN-------------YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138 (324) Q Consensus 72 l~~~~~k~~~l~~~Gid~vi~~~F~~~~a~-------------ls~e~Fi~~iL~~~l~~k~ivVG~Df~FG~~r~Gd~~ 138 (324) +.+.+ ..+...+.|.++++..-|++++.+ ++|.+...-+ ..+++.+-+ |=.+..|... T Consensus 73 V~~~~-~~~~a~~aGa~FivSP~~~~~v~~~a~~~~i~~iPGv~TpsEi~~A~---~~G~~~vK~-----FPA~~~gG~~ 143 (212) T d1vhca_ 73 VLTAE-QVVLAKSSGADFVVTPGLNPKIVKLCQDLNFPITPGVNNPMAIEIAL---EMGISAVKF-----FPAEASGGVK 143 (212) T ss_dssp CCSHH-HHHHHHHHTCSEEECSSCCHHHHHHHHHTTCCEECEECSHHHHHHHH---HTTCCEEEE-----TTTTTTTHHH T ss_pred CCCHH-HHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH---HCCCCEEEE-----CCCCCCCHHH T ss_conf 46589-99999861786897788879999999855997168868889999999---879997997-----5543222489 Q ss_pred HHHHHHHCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHH Q ss_conf 4677510126416761522302333023036899987258 Q gi|254780846|r 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178 (324) Q Consensus 139 ~L~~~~~~~g~~v~~i~~~~~~~~~~ISSt~IR~~l~~Gd 178 (324) +|+.+...+. .+..++ . +| ||..+++++|+.|. T Consensus 144 ~lkal~~p~p-~~~~~p---t-GG--V~~~N~~~yl~~g~ 176 (212) T d1vhca_ 144 MIKALLGPYA-QLQIMP---T-GG--IGLHNIRDYLAIPN 176 (212) T ss_dssp HHHHHHTTTT-TCEEEE---B-SS--CCTTTHHHHHTSTT T ss_pred HHHHHHCCCC-CCEEEE---C-CC--CCHHHHHHHHHCCC T ss_conf 9998756134-872885---3-89--88888999993899 No 42 >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Probab=22.13 E-value=21 Score=13.94 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=7.4 Q ss_pred HHHHHHHHHHHHHHCCC Q ss_conf 89999999999950279 Q gi|254780846|r 32 LGHHLILEQAIKIANNS 48 (324) Q Consensus 32 ~GHq~Li~~~~~~a~~~ 48 (324) .|=.+-++++++.|+.. T Consensus 65 ~G~~~~f~~lv~~~H~~ 81 (347) T d1ht6a2 65 YGNAAELKSLIGALHGK 81 (347) T ss_dssp TCCHHHHHHHHHHHHHT T ss_pred CCCHHHHHHHHHHHHHC T ss_conf 78999999999997244 No 43 >d2nqra3 c.57.1.2 (A:178-326) MoeA, central domain {Escherichia coli [TaxId: 562]} Probab=20.71 E-value=19 Score=14.24 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=21.4 Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECCHHHCC Q ss_conf 03377556024677510126416761522302 Q gi|254780846|r 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNN 160 (324) Q Consensus 129 FG~~r~Gd~~~L~~~~~~~g~~v~~i~~~~~~ 160 (324) =|.-+..|...|..+++++|+++.....+.++ T Consensus 21 ~g~i~dsN~~~l~~~l~~~G~~v~~~~~v~Dd 52 (149) T d2nqra3 21 DGQIYDTNRLAVHLMLEQLGCEVINLGIIRDD 52 (149) T ss_dssp TTCEECCHHHHHHHHHHHTTCEEEEEEEECSS T ss_pred CCCEEECCHHHHHHHHHHCCEEEEECCCCCCH T ss_conf 99586264688886453322599991410874 Done!