PSIBLAST alignment of GI: 254780846 and protein with PDB id: 3op1
>gi|307776578|pdb|3OP1|A Chain A, Crystal Structure Of Macrolide-Efflux Protein Sp_1110 From Streptococcus Pneumoniae Length = 308
>gi|307776579|pdb|3OP1|B Chain B, Crystal Structure Of Macrolide-Efflux Protein Sp_1110 From Streptococcus Pneumoniae Length = 308
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 11/293 (3%)
Query: 20 GVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPS- 76
VV +G FDGIH GH + A K A PI V +FN P+ ++ P L +
Sbjct: 22 SVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVXTFNESPKIALEPYHPDLFLHILNP 81
Query: 77 -IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
+E+ L++ G L F+ + A+ +A++F ++ K ++ G + FG D+
Sbjct: 82 AERERKLKREGVEELYLLDFSSQFASLTAQEFF-ATYIKAXNAKIIVAGFDYTFGSDKKT 140
Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
+ + V I ++ +SS+ IR A+ G+V A LLG
Sbjct: 141 AEDLKNYFDGE-----VIIVPPVEDEKGKISSTRIRQAILDGNVKEAGKLLGAPLPSRGX 195
Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
V+HG GRT+G+PTAN+ L + + Y A+ G+N T
Sbjct: 196 VVHGNARGRTIGYPTANLVLLDRTYXPADGVYVVDVEIQRQKYRAXASVGKNVTF-DGEE 254
Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
E IFDF+Q+IYG+ V + D +R KF +++L + DE+ R
Sbjct: 255 ARFEVNIFDFNQDIYGETVXVYWLDRIRDXTKFDSVDQLVDQLKADEEVTRNW 307