RPSBLAST alignment of GI: 254780846 and protein with PDBid: 3op1

>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae} Length = 308
 Score =  229 bits (584), Expect = 8e-61
 Identities = 86/295 (29%), Positives = 143/295 (48%), Gaps = 13/295 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP--IFTLS 73
              VV +G FDGIH GH  +   A K A  +  PI V++FN  P+  ++   P     + 
Sbjct: 20  SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHIL 79

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P+ +E+ L++ G   L    F+ + A+ +A++F     ++ +  K ++ G  + FG D+
Sbjct: 80  NPAERERKLKREGVEELYLLDFSSQFASLTAQEF-FATYIKAMNAKIIVAGFDYTFGSDK 138

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                +       +    + +  + + K +I SS+ IR A+  G+V  A  LLG      
Sbjct: 139 KTAEDL----KNYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGKLLGAPLPSR 193

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG   GRT+G+PTAN+ L     +  +GVY +    Q Q     +A+ G+N T   
Sbjct: 194 GMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQKYR-AMASVGKNVT-FD 251

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
                 E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R 
Sbjct: 252 GEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTRN 306