HHsearch alignment for GI: 254780847 and conserved domain: KOG3085

Probab=99.45  E-value=2e-12  Score=101.80  Aligned_cols=99  Identities=20%  Similarity=0.332  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHCCC-CEEECCCCCCCCCCCCHHHHHH---HHHHHHHH--HCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             999999999973057-4031266432256630011048---99998875--04765323477702589999986543148
Q gi|254780847|r  140 EDYRMLLERFAHRHI-PLICANPDIVANRGNKIIPCAG---ALALIYQQ--LNGIVKMIGKPHLPIYEMAFKKISSLCNS  213 (282)
Q Consensus       140 ~~~~~l~~~~~~~~~-~~i~~N~D~~~p~~~~~~~~~G---~~~~~~~~--~~g~~~~~GKP~~~~~~~a~~~l~~~~~~  213 (282)
T Consensus       116 ~~~~~~lq~lR~~g~~l~iisN~d~r~~~---~l~~~~l~~~fD~vv~S~e~g~~-----KPDp~If~~al~~l-----~  182 (237)
T KOG3085         116 DGMQELLQKLRKKGTILGIISNFDDRLRL---LLLPLGLSAYFDFVVESCEVGLE-----KPDPRIFQLALERL-----G  182 (237)
T ss_pred             CHHHHHHHHHHHCCEEEEEECCCCHHHHH---HHHCCCHHHHHHHHHHHHHHCCC-----CCCHHHHHHHHHHH-----C
T ss_conf             37999999998679399995277277777---76401878763353114342467-----89868999999881-----8


Q ss_pred             CCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHH
Q ss_conf             89000899738857889999976996999718678777
Q gi|254780847|r  214 FNKKRILAIGDGMDTDIKGALQSGIDALYVSDGIHRHE  251 (282)
Q Consensus       214 ~~~~~~lmIGD~l~tDI~gA~~~G~~silV~tG~~~~~  251 (282)
T Consensus       183 v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~  220 (237)
T KOG3085         183 VKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALK  220 (237)
T ss_pred             CCHHHEEEECCCCCCCCHHHHHCCCEEEEECCCCCHHH
T ss_conf             99688688468532122768974977999725652324