HHsearch alignment for GI: 254780847 and conserved domain: TIGR01990
>TIGR01990 bPGM beta-phosphoglucomutase; InterPro: IPR010972 This model represents the beta-phosphoglucomutase enzyme which catalyses the interconversion of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha to beta or vice versa) while the 1-phosphate is not. A separate enzyme is responsible for the isomerisation of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorolysis of maltose (2.4.1.8 from EC), trehalose (2.4.1.64 from EC) or trehalose-6-phosphate (2.4.1.216 from EC). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterised by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold . Beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily , . The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes. The enzyme from Lactococcus lactis has been extensively characterised including a remarkable crystal structure which traps the pentacoordinate transition state . .
Probab=98.80 E-value=2.7e-08 Score=74.67 Aligned_cols=96 Identities=18% Similarity=0.234 Sum_probs=62.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 179999999999730574031266432256630011048999988750-4765323477702589999986543148890
Q gi|254780847|r 138 KTEDYRMLLERFAHRHIPLICANPDIVANRGNKIIPCAGALALIYQQL-NGIVKMIGKPHLPIYEMAFKKISSLCNSFNK 216 (282)
Q Consensus 138 ~~~~~~~l~~~~~~~~~~~i~~N~D~~~p~~~~~~~~~G~~~~~~~~~-~g~~~~~GKP~~~~~~~a~~~l~~~~~~~~~ 216 (282)
T Consensus 93 ~LPGi~~lL~~Lk~~~ikialASaS----kNA~~vLekL~L~~~Fd~IvDp~~~~~gKPdPEIFL~AA~~L-----Gv~P 163 (190)
T TIGR01990 93 VLPGIKSLLEDLKKKNIKIALASAS----KNAPTVLEKLELRDYFDAIVDPAEIKKGKPDPEIFLAAAEGL-----GVSP 163 (190)
T ss_pred HCCCHHHHHHHHHHCCCCEEEEEHH----HHHHHHHHHHHHHHCCCEEECHHHHCCCCCCHHHHHHHHHHC-----CCCH
T ss_conf 0401899999999848948873023----448999998214220422645456217877867999999763-----8975
Q ss_pred CCEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf 008997388578899999769969997
Q gi|254780847|r 217 KRILAIGDGMDTDIKGALQSGIDALYV 243 (282)
Q Consensus 217 ~~~lmIGD~l~tDI~gA~~~G~~silV 243 (282)
T Consensus 164 ~~cigiEDA-~AGI~ai~~aGm~avGv 189 (190)
T TIGR01990 164 EECIGIEDA-QAGIEAIKAAGMFAVGV 189 (190)
T ss_pred HHHHHEECH-HHHHHHHHHCCCEEEEC
T ss_conf 570101225-89999999759537721