HHsearch alignment for GI: 254780847 and conserved domain: TIGR01993
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase; InterPro: IPR010237 This family of proteins includes the SDT1/SSM1 gene from yeast, which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily..
Probab=98.91 E-value=3.9e-09 Score=80.18 Aligned_cols=184 Identities=18% Similarity=0.177 Sum_probs=100.7
Q ss_pred CEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH-HHCCCCCHHCCCCCCHHHHHHHHHHHH
Q ss_conf 9999927443231881486279999999987981999859899958999987-512777000013568799999999853
Q gi|254780847|r 16 DVILCDVWGVLHNGQKFLPGTIPALKEARENGLKVILFTNSPRPSASVISQI-QSLGSSSQFWDDIITSGDLTHHLLVEE 94 (282)
Q Consensus 16 d~~lfD~DGvL~~g~~~ipgA~e~l~~L~~~g~~~~~lTN~s~~~~~~~~~L-~~lG~~~~~~d~I~ts~~~~~~~l~~~ 94 (282)
T Consensus 1 ~~~~FDLDnTLY------P~s~~i~~~~~~----------------~i~~F~~~~L~l~~eeA~------~L~~~yY~~Y 52 (205)
T TIGR01993 1 DVWVFDLDNTLY------PHSAGIFLLIDR----------------NITEFVAAKLKLSEEEAR------KLRKDYYKEY 52 (205)
T ss_pred CEEEEECCCCCC------HHHCCHHHHHHH----------------HHHHHHHHHCCCCHHHHH------HHHHHHHHHH
T ss_conf 946630766588------443177999999----------------999999987089988999------9999987857
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC-CHHHHHHHHHHHH---HCCCCEEECCCCCCCCCC--
Q ss_conf 1654543872521243117973157556786899843771001-1799999999997---305740312664322566--
Q gi|254780847|r 95 SHNIFFIGPQRDYALLEKLNIKIVNEQHAETILCTGLYDDEKD-KTEDYRMLLERFA---HRHIPLICANPDIVANRG-- 168 (282)
Q Consensus 95 ~~~v~viG~~~~~~~l~~~g~~~~~~~~~~~iv~~g~~~~~~~-~~~~~~~l~~~~~---~~~~~~i~~N~D~~~p~~-- 168 (282)
T Consensus 53 G~t--------l~GL-~~~gh~i-~~~ey~~~VH~~lpy~~~~kpdp~L~~~L~~LpqsGK~~Rk~iFTN~~~~Ha~r~l 122 (205)
T TIGR01993 53 GTT--------LAGL-MILGHEI-DADEYLRYVHGRLPYEKLKKPDPELRNLLLRLPQSGKKGRKIIFTNGDRAHARRAL 122 (205)
T ss_pred HHH--------HHHH-HHHCCCC-CHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH
T ss_conf 589--------9999-9857997-86556430367676245553898899999973412655556776158789999999
Q ss_pred ------CCH--HHHHHHHHHH-HH----HHCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCCCEEEECCCHHHHHHHHH
Q ss_conf ------300--1104899998-87----504765323477702589999986543148-890008997388578899999
Q gi|254780847|r 169 ------NKI--IPCAGALALI-YQ----QLNGIVKMIGKPHLPIYEMAFKKISSLCNS-FNKKRILAIGDGMDTDIKGAL 234 (282)
Q Consensus 169 ------~~~--~~~~G~~~~~-~~----~~~g~~~~~GKP~~~~~~~a~~~l~~~~~~-~~~~~~lmIGD~l~tDI~gA~ 234 (282)
T Consensus 123 ~~LGi~d~FD~i~~~~~~~~~lfGeaP~ssdd~~~~~~KP~~~ay~~~~~~~-----~~vd~~~~~f~DDS~r-Ni~~~k 196 (205)
T TIGR01993 123 NRLGIEDCFDGIFDIDTANPDLFGEAPYSSDDETLLIPKPSPEAYEKALREA-----GVVDPERAIFFDDSAR-NIAAAK 196 (205)
T ss_pred HHCCHHHCCCCEEEHHHHCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-----CCCCCCCEEEECCCHH-HHHHHH
T ss_conf 8647212046423051204123168887888876312088889999999985-----5887200175304687-888788
Q ss_pred HCCCCEEEE
Q ss_conf 769969997
Q gi|254780847|r 235 QSGIDALYV 243 (282)
Q Consensus 235 ~~G~~silV 243 (282)
T Consensus 197 aLGmkTVl~ 205 (205)
T TIGR01993 197 ALGMKTVLV 205 (205)
T ss_pred HCCCCCCCC
T ss_conf 706611049